Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K01
         (917 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   157   3e-38
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   157   3e-38
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   125   1e-28

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  157 bits (380), Expect = 3e-38
 Identities = 80/160 (50%), Positives = 104/160 (65%)
 Frame = +3

Query: 162 KNLRKNPGTMILGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNG 341
           K  +K+P    L  G++R+SK++M+ ++A Y+                  VK+IGG KNG
Sbjct: 15  KKGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNG 74

Query: 342 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 521
           G RTV LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL
Sbjct: 75  GERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVL 134

Query: 522 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLG 641
           + +L SGLLLVTGPFA NSCPLRR+ QRYVI TS+++ LG
Sbjct: 135 LKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLG 174


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  157 bits (380), Expect = 3e-38
 Identities = 80/160 (50%), Positives = 104/160 (65%)
 Frame = +3

Query: 162 KNLRKNPGTMILGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNG 341
           K  +K+P    L  G++R+SK++M+ ++A Y+                  VK+IGG KNG
Sbjct: 15  KKGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNG 74

Query: 342 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 521
           G RTV LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL
Sbjct: 75  GERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVL 134

Query: 522 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLG 641
           + +L SGLLLVTGPFA NSCPLRR+ QRYVI TS+++ LG
Sbjct: 135 LKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLG 174


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  125 bits (301), Expect = 1e-28
 Identities = 71/160 (44%), Positives = 98/160 (61%)
 Frame = +3

Query: 162 KNLRKNPGTMILGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNG 341
           K  +K+P    L  G++R+SK++M+ ++A Y+               + VV++       
Sbjct: 15  KKGKKHPVNSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA------ 58

Query: 342 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 521
               VP+K+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL
Sbjct: 59  ---KVPIKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVL 115

Query: 522 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLG 641
           + +L SGLLLVTGPFA NSCPLRR+ QRYVI TS+++ LG
Sbjct: 116 LKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLG 155


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,269,317
Number of Sequences: 53049
Number of extensions: 680534
Number of successful extensions: 1524
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)