Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_J22
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 219 2e-57
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 219 2e-57
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 159 2e-39
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 159 2e-39
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 137 8e-33
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 137 8e-33
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 128 4e-30
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 126 2e-29
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 126 2e-29
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 122 3e-28
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 122 3e-28
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 122 3e-28
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 105 4e-23
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 105 4e-23
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 95 6e-20
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 60 2e-09
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 54 2e-07
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 28 7.7
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 28 7.7
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 28 7.7
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 219 bits (536), Expect = 2e-57
Identities = 108/153 (70%), Positives = 126/153 (82%)
Frame = +3
Query: 201 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV 380
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+ NG+VTITNDGATIL QMSV
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Query: 381 IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQL 560
IHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+ LL KGIHPT IS+ F A
Sbjct: 83 IHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAE 142
Query: 561 ALQVVENMSTPVDLNNEXXXXXXXXTSLNSKVV 659
A ++++ MS+PVDL+N+ TSLNSKVV
Sbjct: 143 AEKILDEMSSPVDLSNDALLNKMATTSLNSKVV 175
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 219 bits (536), Expect = 2e-57
Identities = 108/153 (70%), Positives = 126/153 (82%)
Frame = +3
Query: 201 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV 380
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+ NG+VTITNDGATIL QMSV
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSV 82
Query: 381 IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQL 560
IHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+ LL KGIHPT IS+ F A
Sbjct: 83 IHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAE 142
Query: 561 ALQVVENMSTPVDLNNEXXXXXXXXTSLNSKVV 659
A ++++ MS+PVDL+N+ TSLNSKVV
Sbjct: 143 AEKILDEMSSPVDLSNDALLNKMATTSLNSKVV 175
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 159 bits (386), Expect = 2e-39
Identities = 78/145 (53%), Positives = 108/145 (74%)
Frame = +3
Query: 237 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELS 416
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++VELS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 417 RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQLALQVVENMSTPV 596
++QD E GDGTT VVV+AGALL+ AEKL+ +GIHP I+DGF A + AL+ ++++S
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKF 156
Query: 597 DLNNEXXXXXXXXTSLNSKVVFTTL 671
+ N TSL SK+V +L
Sbjct: 157 PVENRERLVETAQTSLGSKIVNRSL 181
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 159 bits (386), Expect = 2e-39
Identities = 78/145 (53%), Positives = 108/145 (74%)
Frame = +3
Query: 237 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELS 416
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++VELS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 417 RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQLALQVVENMSTPV 596
++QD E GDGTT VVV+AGALL+ AEKL+ +GIHP I+DGF A + AL+ ++++S
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKF 156
Query: 597 DLNNEXXXXXXXXTSLNSKVVFTTL 671
+ N TSL SK+V +L
Sbjct: 157 PVENRERLVETAQTSLGSKIVNRSL 181
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 159 bits (386), Expect = 2e-39
Identities = 78/145 (53%), Positives = 108/145 (74%)
Frame = +3
Query: 237 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELS 416
S+I AA+AVA+ +RTSLGPRG+DKM+ + +G+VTITNDGATI+++M V H AK++VELS
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELS 96
Query: 417 RAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQLALQVVENMSTPV 596
++QD E GDGTT VVV+AGALL+ AEKL+ +GIHP I+DGF A + AL+ ++++S
Sbjct: 97 KSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKF 156
Query: 597 DLNNEXXXXXXXXTSLNSKVVFTTL 671
+ N TSL SK+V +L
Sbjct: 157 PVENRERLVETAQTSLGSKIVNRSL 181
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 137 bits (332), Expect = 8e-33
Identities = 71/166 (42%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Frame = +3
Query: 189 ILQLYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILK 368
IL L ++ IR N+ AA A+A+ +++SLGP G+DKM+ G+V +TNDGATILK
Sbjct: 8 ILALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Query: 369 QMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXK 548
Q+ V HPA K+LVEL++ QD E GDGTTSVV++A LL A++L+++ +HPT I +G+
Sbjct: 68 QLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL 127
Query: 549 ALQLALQVV-ENMSTPVDLNNEXXXXXXXXTSLNSKVVFTTLNYXG 683
A + A++ + EN+S D TS++SK++ ++ G
Sbjct: 128 ACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFG 173
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 137 bits (332), Expect = 8e-33
Identities = 71/166 (42%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Frame = +3
Query: 189 ILQLYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILK 368
IL L ++ IR N+ AA A+A+ +++SLGP G+DKM+ G+V +TNDGATILK
Sbjct: 8 ILALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Query: 369 QMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXK 548
Q+ V HPA K+LVEL++ QD E GDGTTSVV++A LL A++L+++ +HPT I +G+
Sbjct: 68 QLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL 127
Query: 549 ALQLALQVV-ENMSTPVDLNNEXXXXXXXXTSLNSKVVFTTLNYXG 683
A + A++ + EN+S D TS++SK++ ++ G
Sbjct: 128 ACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFG 173
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 128 bits (310), Expect = 4e-30
Identities = 61/145 (42%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Frame = +3
Query: 228 IRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLV 407
+++ NINA K +AD IRTSLGPR M KM+ G + +TNDG IL++++V HPAAK ++
Sbjct: 24 VQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMI 83
Query: 408 ELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQLALQVVEN-M 584
E++R QD E GDGTTSV+++AG ++ A+ L++ HPT+I + +AL+ +Q EN
Sbjct: 84 EIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMIQWSENKF 143
Query: 585 STPVDLNNEXXXXXXXXTSLNSKVV 659
S VD+ ++ + L +K++
Sbjct: 144 SKTVDITDDAEIAKVVKSCLGTKMI 168
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 126 bits (304), Expect = 2e-29
Identities = 61/144 (42%), Positives = 95/144 (65%), Gaps = 2/144 (1%)
Frame = +3
Query: 234 LSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVEL 413
+SNINA + VAD+IRT+LGPRG+DK+I + G TI+NDGATILK + ++ PAA +V++
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDI 82
Query: 414 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQLALQVVENMSTP 593
+R+QD E GDGTTSVVV+A +L + ++ G+HP ++ KA + L+ + ++
Sbjct: 83 ARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIK 142
Query: 594 VDLNNE--XXXXXXXXTSLNSKVV 659
++ E T+L+SK+V
Sbjct: 143 INGETELREMLVKCAATTLSSKLV 166
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 126 bits (304), Expect = 2e-29
Identities = 61/144 (42%), Positives = 95/144 (65%), Gaps = 2/144 (1%)
Frame = +3
Query: 234 LSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVEL 413
+SNINA + VAD+IRT+LGPRG+DK+I + G TI+NDGATILK + ++ PAA +V++
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDI 82
Query: 414 SRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQLALQVVENMSTP 593
+R+QD E GDGTTSVVV+A +L + ++ G+HP ++ KA + L+ + ++
Sbjct: 83 ARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIK 142
Query: 594 VDLNNE--XXXXXXXXTSLNSKVV 659
++ E T+L+SK+V
Sbjct: 143 INGETELREMLVKCAATTLSSKLV 166
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 122 bits (295), Expect = 3e-28
Identities = 68/165 (41%), Positives = 101/165 (61%), Gaps = 7/165 (4%)
Frame = +3
Query: 186 LILQLYKDKSKPT---DIRLSNINAAKAVADAIRTSLGPRGMDKMIQAAN----GEVTIT 344
L +Q+ KD ++ RLS+ A A+ D ++++LGP+GMDK++ + N G + +T
Sbjct: 2 LPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVT 61
Query: 345 NDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPT 524
NDGATILK + V +PAAK+LV++S QD E GDGTTSV V+A LL AEKL+ + IHP
Sbjct: 62 NDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQ 121
Query: 525 VISDGFXKALQLALQVVENMSTPVDLNNEXXXXXXXXTSLNSKVV 659
I G+ +AL +A + ++ S N T+L SK++
Sbjct: 122 TIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKIL 166
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 122 bits (295), Expect = 3e-28
Identities = 68/165 (41%), Positives = 101/165 (61%), Gaps = 7/165 (4%)
Frame = +3
Query: 186 LILQLYKDKSKPT---DIRLSNINAAKAVADAIRTSLGPRGMDKMIQAAN----GEVTIT 344
L +Q+ KD ++ RLS+ A A+ D ++++LGP+GMDK++ + N G + +T
Sbjct: 2 LPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVT 61
Query: 345 NDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPT 524
NDGATILK + V +PAAK+LV++S QD E GDGTTSV V+A LL AEKL+ + IHP
Sbjct: 62 NDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQ 121
Query: 525 VISDGFXKALQLALQVVENMSTPVDLNNEXXXXXXXXTSLNSKVV 659
I G+ +AL +A + ++ S N T+L SK++
Sbjct: 122 TIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKIL 166
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 122 bits (295), Expect = 3e-28
Identities = 68/165 (41%), Positives = 101/165 (61%), Gaps = 7/165 (4%)
Frame = +3
Query: 186 LILQLYKDKSKPT---DIRLSNINAAKAVADAIRTSLGPRGMDKMIQAAN----GEVTIT 344
L +Q+ KD ++ RLS+ A A+ D ++++LGP+GMDK++ + N G + +T
Sbjct: 2 LPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVT 61
Query: 345 NDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPT 524
NDGATILK + V +PAAK+LV++S QD E GDGTTSV V+A LL AEKL+ + IHP
Sbjct: 62 NDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQ 121
Query: 525 VISDGFXKALQLALQVVENMSTPVDLNNEXXXXXXXXTSLNSKVV 659
I G+ +AL +A + ++ S N T+L SK++
Sbjct: 122 TIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKIL 166
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 105 bits (252), Expect = 4e-23
Identities = 46/113 (40%), Positives = 76/113 (67%)
Frame = +3
Query: 240 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSR 419
NI+ A+ + D +R++LGP+G KM+ + G++ +T DG +L +M++ HP A M+ + S
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 420 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQLALQVVE 578
AQD GDGTTS V++ G LL AE L+ +G+HP ++++GF A L+++E
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLE 135
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 105 bits (252), Expect = 4e-23
Identities = 46/113 (40%), Positives = 76/113 (67%)
Frame = +3
Query: 240 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSR 419
NI+ A+ + D +R++LGP+G KM+ + G++ +T DG +L +M++ HP A M+ + S
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 420 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQLALQVVE 578
AQD GDGTTS V++ G LL AE L+ +G+HP ++++GF A L+++E
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLE 135
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 95.1 bits (226), Expect = 6e-20
Identities = 46/140 (32%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Frame = +3
Query: 240 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSR 419
NI A +A IR++ GP GM+KM+ ++ +TND ATILK++ + HPAA++++ +
Sbjct: 31 NIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARIIIMATE 90
Query: 420 AQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKALQLALQVVENM--STP 593
Q+ + GD T +VV++A ALL+ A L+ G+ P ++ G+ +A + AL+++ +
Sbjct: 91 MQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEA 150
Query: 594 VDLNNEXXXXXXXXTSLNSK 653
D+ N +++ SK
Sbjct: 151 TDMKNIEEVRQYIRSAITSK 170
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 60.5 bits (140), Expect = 2e-09
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Frame = +3
Query: 204 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV- 380
KD + R + + +ADA+ ++GP+G + +I+ + G IT DG T+ K + +
Sbjct: 19 KDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLK 78
Query: 381 ---IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFXKA 551
+ AK++ +++ + EAGDGTT V+A A+ + +++G + I G A
Sbjct: 79 DKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNA 138
Query: 552 LQLALQVVENMSTPVDLNNE 611
+++ + ++ +S V E
Sbjct: 139 VEVVVAELKKISKKVTTPEE 158
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 53.6 bits (123), Expect = 2e-07
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Frame = +3
Query: 204 KDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMSV- 380
KD + R + + +ADA+ ++GP+G + +I+ + G IT DG T+ K + +
Sbjct: 19 KDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLK 78
Query: 381 ---IHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALL-DSAEKLLQKGIHPTVISDGFXK 548
+ AK++ +++ + EAGDGTT V+ A+ + E+ +G + I G
Sbjct: 79 DKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRG-NAVEIRRGVMN 137
Query: 549 ALQLALQVVENMSTPVDLNNE 611
A+++ + ++ +S V E
Sbjct: 138 AVEVVVAELKKISKKVTTPEE 158
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 354 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 500
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 354 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 500
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 354 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 500
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 371 NECYSSSCKNVGRIISCSRY*SW*WNNISSCYC 469
N + SC+ R SCSR SW SS +C
Sbjct: 9 NYAFEDSCRKSTRTSSCSRRDSWNGETRSSSHC 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,605,802
Number of Sequences: 27780
Number of extensions: 293271
Number of successful extensions: 780
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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