Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_J20
(965 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 38 0.016
07_03_0560 + 19479597-19480667 33 0.34
03_01_0515 - 3864796-3865425 32 0.60
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.8
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.8
11_06_0610 - 25449085-25453284 30 3.2
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 30 3.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.5
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 7.3
02_04_0400 - 22608519-22608844,22609044-22609122 29 7.3
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 7.3
12_02_0450 + 19172812-19172920,19173020-19173088,19173168-191732... 28 9.7
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 9.7
08_01_0059 - 394001-394708 28 9.7
07_03_1751 - 29215074-29216270 28 9.7
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 37.5 bits (83), Expect = 0.016
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 783 PXPGVRXXPPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPP 917
P P + PPP P PP P P P PG PPP
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 31.9 bits (69), Expect = 0.79
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 780 SPXPGVRXXPPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPPG*XXXXFXPPXGXX 959
SP P P P P PP P P P P PPP PP
Sbjct: 310 SPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
Query: 960 P 962
P
Sbjct: 370 P 370
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +3
Query: 783 PXPGVRXXPPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPPG*XXXXFXPPXG 953
P P PPP P PP P P P K PP G PP G
Sbjct: 319 PKPAAAAPPPPPPPKAAPPPPP---PKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
>07_03_0560 + 19479597-19480667
Length = 356
Score = 33.1 bits (72), Expect = 0.34
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -2
Query: 961 GXXPXGGXKXXXFXPGGGXXXXXXXPGXXGXXGXGXXXGGXXGXXXPXXGGGXXLTPGXG 782
G GG K F GGG G G G G GG G GGG G G
Sbjct: 214 GGFGGGGGKGGGFGAGGGMGGGAGGGGGLGGGGGGGMGGGGGGGMGGGAGGGFGGGAGGG 273
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 961 GXXPXGGXKXXXFXPGGGXXXXXXXPGXXGXXGXGXXXGGXXGXXXPXXGGGXXLTPGXG 782
G GG K F GGG G G G G GG GGG G G
Sbjct: 180 GGLGGGGGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGGGGKGGGFGAGGGMGGGAGGG 239
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.3 bits (70), Expect = 0.60
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 783 PXPGVRXXPPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPP 917
P P V PPP P PP P P P P PPP
Sbjct: 75 PPPSVTSSPPPPP-LPPPPPPPAASPPPPPPSPPPPSPVKSSPPP 118
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +3
Query: 783 PXPGVRXXPPPXXGXXXPXXPP-XXXPXPXXPXXPGKXXXXXXPPPG*XXXXFXPPXGXX 959
P P + PPP P PP P P P P PPP PP
Sbjct: 1138 PPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPA 1197
Query: 960 P 962
P
Sbjct: 1198 P 1198
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 780 SPXPGVRXXPPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPP 917
SP P PPP P PP P P P PPP
Sbjct: 1163 SPPPATPPPPPPLSPSLPPPPPPPPLP-SGPPPQPAPPPLPIQPPP 1207
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 789 PGVRXXPPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPP 917
P + PPP P P P P P P PPP
Sbjct: 1158 PPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPP 1200
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 807 PPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPP 917
PPP G PP P P P P PPP
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPP 587
Score = 29.1 bits (62), Expect = 5.5
Identities = 26/108 (24%), Positives = 26/108 (24%), Gaps = 1/108 (0%)
Frame = +3
Query: 642 PLESPPRCAPPXXXPXPXXXXXXXXXXXXXXXXGGXXPXXXXXXXX-SPXPGVRXXPPPX 818
P SP APP P P P S P PPP
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPL 594
Query: 819 XGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPPG*XXXXFXPPXGXXP 962
P PP P P P PPP PP P
Sbjct: 595 PNCLVPSPPPPPPPPPILPNR--SVPPPPPPPPPLPNHSVLPPPPPPP 640
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 783 PXPGVRXXPPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPP 917
P P PPP P P P P P K PPP
Sbjct: 626 PLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPP 670
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 792 GVRXXPPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPPG 920
GV PPP G PP P P PG PPPG
Sbjct: 1181 GVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPG-VPGGPPPPPG 1222
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.9 bits (64), Expect = 3.2
Identities = 24/91 (26%), Positives = 27/91 (29%)
Frame = +3
Query: 642 PLESPPRCAPPXXXPXPXXXXXXXXXXXXXXXXGGXXPXXXXXXXXSPXPGVRXXPPPXX 821
P++SPP AP P P P SP P V+ PPP
Sbjct: 1164 PIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPP--PPAPVISPPPPVKSPPPPAP 1221
Query: 822 GXXXPXXPPXXXPXPXXPXXPGKXXXXXXPP 914
P PP P P P PP
Sbjct: 1222 VILPP--PPVKSPPPPAPVISPPPPEKSPPP 1250
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = -2
Query: 961 GXXPXGGXKXXXFXPGGGXXXXXXXPGXXGXXGXGXXXGG-XXGXXXPXXGGGXXLTPGX 785
G P GG + PGGG G G G GG G GGG G
Sbjct: 45 GRGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGGGGGGGYESGGGRGYGGGGRGYESGG 104
Query: 784 G 782
G
Sbjct: 105 G 105
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -2
Query: 946 GGXKXXXFXPGGGXXXXXXXPGXXGXXGXGXXX-GGXXGXXXPXXGGGXXLTPGXG 782
GG + GGG G G G GG G P GGG PG G
Sbjct: 7 GGGRGRGRGRGGGRGGGGGDGRGGGYGGAGGGGVGGRGGRGPPGGGGGRGYEPGGG 62
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.5
Identities = 24/95 (25%), Positives = 26/95 (27%), Gaps = 3/95 (3%)
Frame = +3
Query: 642 PLESPPRCAPPXXXPXPXXXXXXXXXXXXXXXXGGXXPXXXXXXXXSPXP-GVRXXPPPX 818
P +PP PP P P P P P GV PP
Sbjct: 50 PFLAPPP-PPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPP 108
Query: 819 XGXXXPXXPPXXXPXPXXP--XXPGKXXXXXXPPP 917
P PP P P P P + PPP
Sbjct: 109 PPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPPP 143
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 4/49 (8%)
Frame = +3
Query: 780 SPXPGVRXXPPPXXGXXXPXXPP----XXXPXPXXPXXPGKXXXXXXPP 914
SP P PPP P PP P P P PG PP
Sbjct: 582 SPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPPPP 630
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -2
Query: 916 GGGXXXXXXXPGXXGXXGXGXXXGGXXGXXXPXXGGGXXLTPGXGEXXXXXXXXGXXPP 740
GGG G G G G GG G GGG G G G PP
Sbjct: 38 GGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPP 96
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -2
Query: 916 GGGXXXXXXXPGXXGXXGXGXXXGGXXGXXXPXXGGGXXLTPGXGEXXXXXXXXGXXPP 740
GGG G G G G GG G GGG G G G PP
Sbjct: 46 GGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPP 104
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 807 PPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPP 917
PPP P PP P P P P K PP
Sbjct: 354 PPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPP 390
>12_02_0450 +
19172812-19172920,19173020-19173088,19173168-19173274,
19173874-19174365
Length = 258
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -2
Query: 946 GGXKXXXFXPGGGXXXXXXXPGXXGXXGXGXXXGGXXGXXXPXXGGG 806
GG + GGG G G G G GG G GGG
Sbjct: 119 GGYGGGGYGGGGGGYGGGGYSGGGGYGGGGYSGGGGGGGGYQGGGGG 165
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 783 PXPGVRXXPPPXXGXXXPXXPPXXXPXPXXPXXPGKXXXXXXPPP 917
P P R PPP P P P P P PPP
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPP 48
>07_03_1751 - 29215074-29216270
Length = 398
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 946 GGXKXXXFXPGGGXXXXXXXPGXXGXXGXGXXXGGXXGXXXPXXGGG 806
GG K F GGG G G G GG G GGG
Sbjct: 294 GGGKGGGFGGGGGGGGGAGAGGGFGGGKGGGFGGGFGGGKGGGVGGG 340
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,698,615
Number of Sequences: 37544
Number of extensions: 320901
Number of successful extensions: 1543
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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