Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_J17
         (938 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    30   4.0  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    30   4.0  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 20/87 (22%), Positives = 27/87 (31%)
 Frame = +2

Query: 479 SPPXXXLAPXXRVGXXVXPPPKGGXRFSPKXGXXPXKXXLXKGPQKAXNPKKAXLVGFFP 658
           +PP     P  +      P P  G  + P+    P        PQ    P  A    + P
Sbjct: 318 APPAPAPGPTYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPTYQPQPPAPPAPAPGPTYQP 377

Query: 659 KXPXPRXNXKKIPPPXXXGGXXPXGXL 739
           + P P     +  PP    G    G L
Sbjct: 378 RPPAPPAPTPEYGPPPPTSGGDEAGSL 404


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 20/87 (22%), Positives = 27/87 (31%)
 Frame = +2

Query: 479 SPPXXXLAPXXRVGXXVXPPPKGGXRFSPKXGXXPXKXXLXKGPQKAXNPKKAXLVGFFP 658
           +PP     P  +      P P  G  + P+    P        PQ    P  A    + P
Sbjct: 318 APPAPAPGPTYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPTYQPQPPAPPAPAPGPTYQP 377

Query: 659 KXPXPRXNXKKIPPPXXXGGXXPXGXL 739
           + P P     +  PP    G    G L
Sbjct: 378 RPPAPPAPTPEYGPPPPTSGGDEAGSL 404


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.148    0.493 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,510,400
Number of Sequences: 53049
Number of extensions: 345307
Number of successful extensions: 454
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4648779081
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)