Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_J16
         (887 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   410   e-116
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         28   0.44 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   4.1  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   4.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   4.1  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   7.1  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    23   9.4  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  410 bits (1010), Expect = e-116
 Identities = 192/246 (78%), Positives = 209/246 (84%)
 Frame = +3

Query: 111 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 290
           MGRVIRAQRKGAGSVF +HTKKRKG PKLR L YAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 291 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 470
           V+FRDPY+F+  K+LFIA EG+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK 
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKT 120

Query: 471 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPIL 650
           GDRG+LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIVAGGGRID PIL
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPIL 180

Query: 651 KAGRAYHKYKVKRNCXPYVRGVAMNPVXHPPGWWYHQHIGKXSXVXRGTFAGRKVGXXXX 830
           KAGRAYHKYKVKRNC P VRGVAMNPV HP G   HQHIGK S V RGT  GRKVG    
Sbjct: 181 KAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIAA 240

Query: 831 XXTXXI 848
             T  I
Sbjct: 241 RRTGRI 246


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 0.44
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 588 SSNRGMVGIVAGGGRIDXPILKAGRAYHK 674
           S+ +  +G V GG   D  IL  GRAYH+
Sbjct: 81  SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +2

Query: 590 KQQRHGRYCCWRWTY 634
           +QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 219 RHGYIKGVVKDIIHDP 266
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 219 RHGYIKGVVKDIIHDP 266
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 491 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 363
           C+T SIT  +        LRH      +S ++S +L  ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -1

Query: 383 STINKLACVEPFGSNEELLPCLELVWIAEVYNSQRCTSTRVMDY 252
           S + KL C+ PF  + ++  C +L     +     C  T    Y
Sbjct: 8   SVVGKLTCLSPFLQSIKVASCCQLEAFLTLPTYGNCLQTIAEKY 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 875,313
Number of Sequences: 2352
Number of extensions: 18567
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)