Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_J11
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 83 3e-16
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 83 3e-16
U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated k... 56 3e-08
U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated ... 56 3e-08
U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated ... 56 3e-08
U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated k... 56 3e-08
D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase ... 56 3e-08
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 34 0.12
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 34 0.12
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 34 0.12
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 28 7.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 7.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 7.6
>Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical
protein C45B11.1b protein.
Length = 520
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +3
Query: 414 ISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLVGNNQILKSTNRPLPLVDPSEITPTEIL 593
IS PSNFEHR+H GFD G + GLP QW +L+G +S +RP P+VDPS ITP ++
Sbjct: 16 ISTPSNFEHRIHAGFDARSGTYTGLPKQWQALLGPP---RSISRPKPMVDPSCITPVDVA 72
Query: 594 DLKTIVGG 617
+LKT++ G
Sbjct: 73 ELKTVIRG 80
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +3
Query: 414 ISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLVGNNQILKSTNRPLPLVDPSEITPTEIL 593
IS PSNFEHR+H GFD G + GLP QW +L+G +S +RP P+VDPS ITP ++
Sbjct: 16 ISTPSNFEHRIHAGFDARSGTYTGLPKQWQALLGPP---RSISRPKPMVDPSCITPVDVA 72
Query: 594 DLKTIVGG 617
+LKT++ G
Sbjct: 73 ELKTVIRG 80
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +3
Query: 414 ISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLVGNNQILKSTNRPLPLVDPSEITPTEIL 593
IS PSNFEHR+H GFD G + GLP QW +L+G +S +RP P+VDPS ITP ++
Sbjct: 16 ISTPSNFEHRIHAGFDARSGTYTGLPKQWQALLGPP---RSISRPKPMVDPSCITPVDVA 72
Query: 594 DLKTIVGG 617
+LKT++ G
Sbjct: 73 ELKTVIRG 80
>U63744-1|AAC47308.1| 572|Caenorhabditis elegans p21-activated
kinase CePAK protein.
Length = 572
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 408 PLISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLVGNNQILKSTNRPLP 554
P+IS PSNFEH +H G+D G+F G+P WA L+ ++QI K + P
Sbjct: 65 PVISRPSNFEHTIHVGYDPKTGEFTGMPEAWARLLTDSQISKQEQQQNP 113
>U29612-11|AAO61438.1| 523|Caenorhabditis elegans P21-activated
kinase family protein1, isoform c protein.
Length = 523
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 408 PLISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLVGNNQILKSTNRPLP 554
P+IS PSNFEH +H G+D G+F G+P WA L+ ++QI K + P
Sbjct: 19 PVISRPSNFEHTIHVGYDPKTGEFTGMPEAWARLLTDSQISKQEQQQNP 67
>U29612-10|AAA68805.2| 572|Caenorhabditis elegans P21-activated
kinase family protein1, isoform a protein.
Length = 572
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 408 PLISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLVGNNQILKSTNRPLP 554
P+IS PSNFEH +H G+D G+F G+P WA L+ ++QI K + P
Sbjct: 65 PVISRPSNFEHTIHVGYDPKTGEFTGMPEAWARLLTDSQISKQEQQQNP 113
>U29612-9|AAL65775.1| 569|Caenorhabditis elegans P21-activated
kinase family protein1, isoform b protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 408 PLISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLVGNNQILKSTNRPLP 554
P+IS PSNFEH +H G+D G+F G+P WA L+ ++QI K + P
Sbjct: 65 PVISRPSNFEHTIHVGYDPKTGEFTGMPEAWARLLTDSQISKQEQQQNP 113
>D83215-1|BAA11844.1| 569|Caenorhabditis elegans protein kinase
protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 408 PLISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLVGNNQILKSTNRPLP 554
P+IS PSNFEH +H G+D G+F G+P WA L+ ++QI K + P
Sbjct: 65 PVISRPSNFEHTIHVGYDPKTGEFTGMPEAWARLLTDSQISKQEQQQNP 113
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 414 ISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLV 512
IS P N HRVH G+D KF GLP W ++
Sbjct: 41 ISQPYNTVHRVHVGYDGQ--KFSGLPQPWMDIL 71
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 414 ISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLV 512
IS P N HRVH G+D KF GLP W ++
Sbjct: 41 ISQPYNTVHRVHVGYDGQ--KFSGLPQPWMDIL 71
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 414 ISPPSNFEHRVHTGFDKHEGKFVGLPLQWASLV 512
IS P N HRVH G+D KF GLP W ++
Sbjct: 41 ISQPYNTVHRVHVGYDGQ--KFSGLPQPWMDIL 71
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical
protein T20G5.1 protein.
Length = 1681
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 700 MVLYCQRHQMLLDLVL-LEAQXHQKFDEIYV 789
+++ C RH M+ DLVL L QK+ E++V
Sbjct: 776 LIIVCDRHNMVHDLVLYLYRNQLQKYIEVFV 806
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 414 ISPPSNFEHRVHTGFDKHEG 473
IS P+NF+H+ H G+++ G
Sbjct: 432 ISNPTNFQHKAHVGWNQDSG 451
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 414 ISPPSNFEHRVHTGFDKHEG 473
IS P+NF+H+ H G+++ G
Sbjct: 258 ISNPTNFQHKAHVGWNQDSG 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,555,380
Number of Sequences: 27780
Number of extensions: 415784
Number of successful extensions: 1007
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -