Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_J09
(884 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 166 6e-40
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 162 1e-38
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 159 9e-38
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 153 4e-36
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 153 6e-36
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 132 1e-29
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 117 5e-25
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 116 1e-24
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 111 2e-23
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 111 3e-23
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 109 1e-22
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 107 4e-22
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 105 1e-21
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 103 6e-21
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 101 2e-20
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 101 2e-20
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 101 3e-20
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 100 4e-20
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 99 7e-20
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 99 1e-19
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 98 3e-19
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 98 3e-19
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 98 3e-19
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 97 4e-19
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 97 4e-19
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 97 5e-19
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 96 9e-19
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 96 9e-19
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 95 2e-18
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 95 2e-18
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 95 2e-18
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 95 3e-18
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 95 3e-18
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 95 3e-18
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 94 4e-18
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 94 5e-18
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 94 5e-18
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 93 6e-18
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 93 9e-18
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 93 1e-17
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 93 1e-17
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 93 1e-17
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 92 1e-17
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 92 1e-17
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 92 2e-17
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 92 2e-17
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 91 3e-17
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 91 3e-17
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 91 3e-17
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 91 3e-17
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 91 3e-17
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 91 3e-17
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 91 3e-17
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 91 5e-17
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 90 6e-17
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 90 6e-17
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 90 8e-17
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 90 8e-17
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 90 8e-17
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 89 1e-16
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 89 1e-16
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 89 2e-16
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 89 2e-16
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 88 2e-16
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 88 3e-16
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 88 3e-16
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 88 3e-16
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 88 3e-16
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 88 3e-16
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 87 4e-16
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 87 4e-16
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 87 4e-16
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 87 4e-16
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 87 6e-16
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 87 6e-16
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 87 7e-16
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 7e-16
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 87 7e-16
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 87 7e-16
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 87 7e-16
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 86 1e-15
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 86 1e-15
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 86 1e-15
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 86 1e-15
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 86 1e-15
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 86 1e-15
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 86 1e-15
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 86 1e-15
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 85 2e-15
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 85 2e-15
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 85 2e-15
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 85 2e-15
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 85 3e-15
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 85 3e-15
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 84 4e-15
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 84 4e-15
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 84 4e-15
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 84 5e-15
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 84 5e-15
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 84 5e-15
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 83 7e-15
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 83 7e-15
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 83 7e-15
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 83 9e-15
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 83 9e-15
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 83 9e-15
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 83 9e-15
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 83 9e-15
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 83 9e-15
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 83 9e-15
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 83 1e-14
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 83 1e-14
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 83 1e-14
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 82 2e-14
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 82 2e-14
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 54 2e-14
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 82 2e-14
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 82 2e-14
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 82 2e-14
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 82 2e-14
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 82 2e-14
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 82 2e-14
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 81 3e-14
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 81 3e-14
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 81 3e-14
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 81 3e-14
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 81 3e-14
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 81 3e-14
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 81 3e-14
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 81 4e-14
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 81 4e-14
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 81 4e-14
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 81 5e-14
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 81 5e-14
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 81 5e-14
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 81 5e-14
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 81 5e-14
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 81 5e-14
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 80 9e-14
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 80 9e-14
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 80 9e-14
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 80 9e-14
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 80 9e-14
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 80 9e-14
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 80 9e-14
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 80 9e-14
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 79 1e-13
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 79 1e-13
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 79 1e-13
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 79 1e-13
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 79 1e-13
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 79 1e-13
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 79 1e-13
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 1e-13
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 79 1e-13
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 79 1e-13
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 79 1e-13
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 79 1e-13
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 79 2e-13
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 79 2e-13
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 79 2e-13
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 79 2e-13
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 79 2e-13
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 79 2e-13
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 79 2e-13
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 79 2e-13
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 79 2e-13
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 79 2e-13
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 79 2e-13
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 78 3e-13
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 78 3e-13
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 78 3e-13
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 78 3e-13
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 78 3e-13
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 78 3e-13
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 78 3e-13
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 78 3e-13
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 77 5e-13
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 77 5e-13
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 77 5e-13
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 77 5e-13
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 77 5e-13
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 77 5e-13
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 77 5e-13
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 77 5e-13
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 77 6e-13
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 77 6e-13
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 77 6e-13
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 77 6e-13
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 77 6e-13
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 77 6e-13
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 77 6e-13
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 77 8e-13
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 77 8e-13
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 77 8e-13
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 77 8e-13
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 77 8e-13
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 77 8e-13
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 76 1e-12
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 76 1e-12
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 76 1e-12
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 76 1e-12
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 76 1e-12
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 76 1e-12
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 76 1e-12
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 76 1e-12
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 76 1e-12
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 76 1e-12
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 76 1e-12
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 75 2e-12
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 75 2e-12
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 2e-12
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 75 2e-12
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 75 2e-12
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 75 2e-12
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 75 2e-12
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 75 2e-12
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 75 2e-12
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 75 2e-12
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 75 2e-12
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 75 2e-12
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 75 2e-12
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 75 2e-12
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 75 3e-12
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 3e-12
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 75 3e-12
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 3e-12
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 75 3e-12
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 75 3e-12
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 75 3e-12
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 75 3e-12
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 74 4e-12
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 74 4e-12
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 74 4e-12
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 74 4e-12
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 74 4e-12
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 74 4e-12
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 74 4e-12
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 74 4e-12
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 74 4e-12
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 74 6e-12
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 74 6e-12
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 74 6e-12
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 74 6e-12
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 6e-12
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 74 6e-12
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 74 6e-12
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 73 7e-12
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 73 7e-12
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 73 7e-12
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 73 7e-12
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 73 7e-12
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 73 7e-12
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 73 7e-12
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 73 7e-12
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 73 7e-12
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 73 1e-11
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 73 1e-11
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 1e-11
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 73 1e-11
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 73 1e-11
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 73 1e-11
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 73 1e-11
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 73 1e-11
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 73 1e-11
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 73 1e-11
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 73 1e-11
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 73 1e-11
UniRef50_Q5CXB0 Cluster: CG6539/Dhh1-like SF II RNA helicase; n=... 73 1e-11
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 73 1e-11
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 73 1e-11
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 73 1e-11
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 72 2e-11
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 72 2e-11
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 72 2e-11
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 72 2e-11
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 72 2e-11
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 2e-11
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 72 2e-11
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 72 2e-11
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 72 2e-11
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 72 2e-11
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 72 2e-11
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 72 2e-11
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 72 2e-11
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 72 2e-11
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 72 2e-11
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 72 2e-11
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 72 2e-11
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 72 2e-11
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 72 2e-11
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 72 2e-11
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 72 2e-11
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 72 2e-11
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 72 2e-11
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 71 3e-11
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 71 3e-11
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 71 3e-11
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 71 3e-11
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 71 3e-11
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 71 4e-11
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 71 4e-11
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 4e-11
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 71 4e-11
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 71 4e-11
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 71 4e-11
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 71 4e-11
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 71 4e-11
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 71 4e-11
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 71 4e-11
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 71 4e-11
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 71 4e-11
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 71 4e-11
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 71 5e-11
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 5e-11
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 71 5e-11
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 71 5e-11
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 71 5e-11
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 71 5e-11
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 71 5e-11
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 71 5e-11
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 71 5e-11
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 71 5e-11
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 71 5e-11
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 71 5e-11
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 70 7e-11
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 70 7e-11
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 70 7e-11
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 70 7e-11
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 70 7e-11
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 70 7e-11
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 70 7e-11
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 9e-11
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 70 9e-11
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 70 9e-11
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 70 9e-11
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 70 9e-11
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 70 9e-11
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 70 9e-11
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 70 9e-11
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 9e-11
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 69 1e-10
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 1e-10
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 69 1e-10
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 69 1e-10
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 69 1e-10
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 69 1e-10
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 69 1e-10
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 69 2e-10
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 69 2e-10
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 69 2e-10
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 69 2e-10
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 69 2e-10
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 2e-10
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 69 2e-10
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 69 2e-10
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 69 2e-10
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 69 2e-10
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 69 2e-10
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 69 2e-10
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 69 2e-10
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 69 2e-10
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 69 2e-10
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 2e-10
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 69 2e-10
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 69 2e-10
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 69 2e-10
UniRef50_Q03AA2 Cluster: Superfamily II DNA and RNA helicase; n=... 69 2e-10
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 69 2e-10
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 69 2e-10
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 2e-10
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 69 2e-10
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 69 2e-10
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 69 2e-10
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 2e-10
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 69 2e-10
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 68 3e-10
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 68 3e-10
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 68 3e-10
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 68 3e-10
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 68 3e-10
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 68 3e-10
UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|R... 68 3e-10
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 68 3e-10
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 68 3e-10
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 68 3e-10
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 68 3e-10
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 68 3e-10
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 68 4e-10
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 68 4e-10
UniRef50_Q97PV7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 68 4e-10
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 68 4e-10
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 68 4e-10
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 68 4e-10
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 68 4e-10
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 68 4e-10
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 68 4e-10
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 68 4e-10
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 68 4e-10
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 68 4e-10
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 67 5e-10
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 67 5e-10
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 67 5e-10
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 67 5e-10
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 67 5e-10
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 67 5e-10
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 67 5e-10
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 67 5e-10
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 67 6e-10
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 67 6e-10
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 67 6e-10
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 67 6e-10
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 67 6e-10
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 67 6e-10
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 67 6e-10
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 67 6e-10
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 67 6e-10
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 67 6e-10
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 67 6e-10
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 66 8e-10
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 66 8e-10
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 66 8e-10
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 66 8e-10
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 66 8e-10
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 66 8e-10
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 66 8e-10
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 51 1e-09
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 66 1e-09
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 66 1e-09
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 66 1e-09
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 66 1e-09
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 66 1e-09
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 66 1e-09
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 66 1e-09
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 66 1e-09
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 66 1e-09
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 66 1e-09
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 66 1e-09
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 66 1e-09
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 66 1e-09
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 66 1e-09
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 66 1e-09
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 66 1e-09
UniRef50_A0DXN3 Cluster: Chromosome undetermined scaffold_69, wh... 66 1e-09
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 1e-09
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 66 1e-09
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 65 2e-09
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 65 2e-09
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 65 2e-09
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 65 2e-09
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 65 2e-09
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 65 2e-09
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 65 2e-09
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 65 2e-09
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 65 2e-09
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 3e-09
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 65 3e-09
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 3e-09
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 65 3e-09
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 65 3e-09
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 65 3e-09
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 65 3e-09
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 65 3e-09
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 65 3e-09
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 65 3e-09
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 65 3e-09
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 64 3e-09
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 64 3e-09
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 64 3e-09
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 64 3e-09
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 64 3e-09
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 64 3e-09
UniRef50_Q750Q4 Cluster: ATP-dependent RNA helicase MSS116, mito... 64 3e-09
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 64 3e-09
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 64 5e-09
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 64 5e-09
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 64 5e-09
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 64 5e-09
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 64 5e-09
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 166 bits (404), Expect = 6e-40
Identities = 81/152 (53%), Positives = 110/152 (72%), Gaps = 1/152 (0%)
Frame = +1
Query: 268 SLAHDLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFD 447
++AHDL RT+DV + EN++F S+LL + GL SGF+KPSPIQ +PLG+CGFD
Sbjct: 4 TIAHDLDAKERTKDVILDENISFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFD 63
Query: 448 LLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLN 624
L++++KSGTGKT+VFS IALE +N + LQV+IL PTREIA QI DV++ +G H GL
Sbjct: 64 LIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLK 123
Query: 625 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLK 720
+E +GG + +D+ K K HI VG+PGR+K
Sbjct: 124 IESFIGGRPLEDDLKK-SSKCHIAVGAPGRVK 154
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 162 bits (393), Expect = 1e-38
Identities = 83/155 (53%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Frame = +1
Query: 259 AVMSLAHDLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKC 438
A + AH+L++ TRT DV I V F+S+LLS+ L GL +SGFQ+PSPIQL +PLG+C
Sbjct: 3 ASVKAAHELQSRTRTDDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRC 62
Query: 439 GFDLLLEAKSGTGKTVVFSIIALEKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHK 615
G DL+++AKSGTGKT VF+ IAL+ L L N QV++L PTREIA QI V+ IGS +
Sbjct: 63 GLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAME 122
Query: 616 GLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLK 720
GL V +GG +++D + KK HI +GSPGR+K
Sbjct: 123 GLECHVFIGGRPISQD-KQHLKKCHIAIGSPGRIK 156
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 159 bits (386), Expect = 9e-38
Identities = 79/152 (51%), Positives = 109/152 (71%), Gaps = 1/152 (0%)
Frame = +1
Query: 268 SLAHDLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFD 447
++AH+L RT D++I E+VTF+ M LS+ L GL++ GF KPSPIQ +PLG+CGFD
Sbjct: 4 NIAHNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFD 63
Query: 448 LLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLN 624
L++ AKSGTGKT VF IIALE +++ + +QV+IL PTREIA QI +VI +G KGL
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLK 123
Query: 625 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLK 720
VE +GG++++ D K HI +G+PGR+K
Sbjct: 124 VESFIGGVAMDIDRKKL-SNCHIAIGAPGRVK 154
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 153 bits (372), Expect = 4e-36
Identities = 80/157 (50%), Positives = 106/157 (67%), Gaps = 2/157 (1%)
Frame = +1
Query: 256 IAVMSLAHDLRNS-TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLG 432
+ ++ A DL + TRT DV + E F S+LLS L GL ++GF++PSP+QL +PLG
Sbjct: 37 VRILRTAQDLSSPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLG 96
Query: 433 KCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSH 609
+CG DL+++AKSGTGKT VFS IAL+ L L N Q++IL PTREIA QI VI IG
Sbjct: 97 RCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIK 156
Query: 610 HKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLK 720
+GL V +GG +++D + KK HI VGSPGR+K
Sbjct: 157 MEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSPGRIK 192
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 153 bits (371), Expect = 6e-36
Identities = 80/151 (52%), Positives = 103/151 (68%), Gaps = 2/151 (1%)
Frame = +1
Query: 274 AHDLRNS-TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDL 450
AHD+ TRT DV + E F S+LLS L GL ++GF++PSP+QL +PLG+CG DL
Sbjct: 44 AHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDL 103
Query: 451 LLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNV 627
+++AKSGTGKT VFS IAL+ L L N Q++IL PTREIA QI VI IG +GL
Sbjct: 104 IVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLEC 163
Query: 628 EVVMGGLSVNEDIAKFKKKVHIVVGSPGRLK 720
V +GG +++D + KK HI VGSPGR+K
Sbjct: 164 HVFIGGTPLSQDKTRL-KKCHIAVGSPGRIK 193
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 132 bits (319), Expect = 1e-29
Identities = 66/127 (51%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Frame = +1
Query: 343 MLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 522
M S+ L GL GFQ+PSPIQL +PLG+CGFDL++ AKSGTGKT+VF II+LE +++
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 523 N-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVV 699
+ + +QV+IL PTREIA QI V +G K L VEV +GGL++ D K I V
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKV-NNCQIAV 119
Query: 700 GSPGRLK 720
G+PGR++
Sbjct: 120 GAPGRIR 126
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 117 bits (281), Expect = 5e-25
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
DLR +T DV + F L L G+ ++GF++PSPIQ +P+ G D+L
Sbjct: 22 DLR--PQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILAR 79
Query: 460 AKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVV 636
AK+GTGKT F I L ++N + + +Q +IL PTRE+A Q V K +G+H L V +
Sbjct: 80 AKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMIT 139
Query: 637 MGGLSVNEDIAKFKKKVHIVVGSPGRL 717
GG ++ +DI + ++ VHI+VG+PGR+
Sbjct: 140 TGGTTLRDDILRLQQPVHILVGTPGRI 166
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 116 bits (278), Expect = 1e-24
Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
+T DV + TF L L G+ +GF+KPSPIQ +P+ G D+L AK+GTG
Sbjct: 36 QTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTG 95
Query: 478 KTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
KT F I LEK+ N +Q +I+ PTRE+A Q V++ +G H G++ V GG ++
Sbjct: 96 KTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGK-HCGISCMVTTGGTNL 154
Query: 655 NEDIAKFKKKVHIVVGSPGRLKTSYCRK 738
+DI + + VHI+VG+PGR+ RK
Sbjct: 155 RDDILRLNETVHILVGTPGRVLDLASRK 182
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 111 bits (268), Expect = 2e-23
Identities = 61/141 (43%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
RT DV+ ++ F+ M LSE L GL + F PSPIQ +PL K G DLL++AKSGTG
Sbjct: 12 RTADVEFDLSLQFSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSGTG 71
Query: 478 KTVVFSIIALEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
KT+VF+++ E N + Q + + PTREIA QI DV+ +IG + +GGL +
Sbjct: 72 KTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGLDI 131
Query: 655 NEDIAKFKKKVHIVVGSPGRL 717
++D K + VVG+PGR+
Sbjct: 132 SQD-RKNLQSCSAVVGTPGRI 151
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 111 bits (266), Expect = 3e-23
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Frame = +1
Query: 289 NSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 468
N RT DV + F L L G+ G++KPSPIQ +P+ G D+L AK+
Sbjct: 76 NRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKN 135
Query: 469 GTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGG 645
GTGK+ + I LE+++L + +Q ++L PTRE+A Q+ + QI H G+ V GG
Sbjct: 136 GTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGG 195
Query: 646 LSVNEDIAKFKKKVHIVVGSPGRL 717
++ +DI + + VH+V+ +PGR+
Sbjct: 196 TNLRDDIMRLDETVHVVIATPGRI 219
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 109 bits (261), Expect = 1e-22
Identities = 54/142 (38%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
R + + N TF S+++ + TL L +S F +PSP+Q +P+G G D+L++AKSGTG
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 478 KTVVFSIIALEKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
KT+VFS++A+E L+ + +Q +I+TPTREI+ QI + ++++ G V +GG +
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 655 NEDIAKFKK-KVHIVVGSPGRL 717
++ K+ + IV+G+PGR+
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRI 151
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 107 bits (257), Expect = 4e-22
Identities = 53/152 (34%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = +1
Query: 268 SLAHDLRNS-TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGF 444
++AH+L N RT DV+ + F+++ L + GL + F+ P+ IQ +P+ G
Sbjct: 4 AIAHNLANGQNRTSDVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGM 63
Query: 445 DLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGL 621
DLL+++KSGTGKT+++ + AL+ +L+ +V+++ PTRE+A Q+ D+ + +G +
Sbjct: 64 DLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSF 123
Query: 622 NVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
V MGG V D K + H+ +G+PGRL
Sbjct: 124 KVSSFMGGTDVTRDREKL-RNCHVAIGTPGRL 154
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 105 bits (252), Expect = 1e-21
Identities = 54/132 (40%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+ F+ + L+ L+ L GF P+PIQ +P+ G D L +A++GTGKT FS+ L
Sbjct: 26 IQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL 85
Query: 508 EKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
KLNL+ Q +++ PTRE+A Q+ IK +G + KGL V + GG S+ + + K
Sbjct: 86 NKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSG 145
Query: 685 VHIVVGSPGRLK 720
HIVVG+PGR+K
Sbjct: 146 AHIVVGTPGRVK 157
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 103 bits (247), Expect = 6e-21
Identities = 64/146 (43%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Frame = +1
Query: 298 RTRDVQI--VENV-TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 468
+T+D+Q +E V TF + LS+ L G+ S GF++PS IQ + G D+L +A+S
Sbjct: 43 QTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQS 102
Query: 469 GTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEV--VM 639
GTGKT F+I AL++++ N QV+IL P RE+A QI DV+K IG + LN+E +
Sbjct: 103 GTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQY---LNIEAFCCI 159
Query: 640 GGLSVNEDIAKFKKKVHIVVGSPGRL 717
GG S E K K+ VHI++ +PGRL
Sbjct: 160 GGTSTQETREKCKQGVHIIIATPGRL 185
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 101 bits (242), Expect = 2e-20
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
D N T D VTFT + +++ L+ L SG+ P+PIQ +P G DLLL
Sbjct: 28 DTNNEAATTDATDENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLS 87
Query: 460 AKSGTGKTVVFSIIALEKL----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNV 627
A++G+GKT F I L++L + + + +ILTPTRE+A Q+ D ++ +GL
Sbjct: 88 AQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFC 147
Query: 628 EVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
++GG N I KK V ++V +PGRL
Sbjct: 148 VPLVGGAPYNGQITALKKGVQVIVATPGRL 177
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 101 bits (242), Expect = 2e-20
Identities = 51/128 (39%), Positives = 79/128 (61%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + +S+ T+ L S GF++P+PIQ +P G D+L +A++GTGKT F I +EK
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 514 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHI 693
+ G+Q +IL PTRE+A Q+ + +++ S +G+ V V GG+ + I KK I
Sbjct: 64 VVGKQGVQSLILAPTRELAMQVAEQLREF-SRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 694 VVGSPGRL 717
VVG+PGR+
Sbjct: 123 VVGTPGRV 130
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 101 bits (241), Expect = 3e-20
Identities = 50/138 (36%), Positives = 81/138 (58%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+ F + + E +I GF++PSPIQ +P G D++ +A++GTGKT F I +
Sbjct: 6 IKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVV 65
Query: 508 EKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
EK++ +Q +ILTPTRE+A Q+ I+++ S HK + + GG S+ I K+ V
Sbjct: 66 EKVSTGRHVQALILTPTRELAIQVSGEIQKL-SKHKKIRTLPIYGGQSIVHQIKALKQGV 124
Query: 688 HIVVGSPGRLKTSYCRKS 741
+V+G+PGR+ RK+
Sbjct: 125 QVVIGTPGRIIDHLRRKT 142
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 100 bits (240), Expect = 4e-20
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
+T V E V F S+ L E L+ ++S GF + IQ +P G D+L EA++GTG
Sbjct: 5 KTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTG 64
Query: 478 KTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
KT F + AL K++ + Q+M+L PTRE+A Q+ + I+ G KGL V + GG S
Sbjct: 65 KTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSY 124
Query: 655 NEDIAKFKKKVHIVVGSPGRLKTSYCRKS 741
+ ++ +VVG+PGRL RKS
Sbjct: 125 GPQFQQLERGAQVVVGTPGRLMDHLRRKS 153
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 99 bits (238), Expect = 7e-20
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + LS + + S G+ + +PIQ +P+ G DL +A++GTGKT F I A+E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 514 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
++++ N Q +IL PTRE+A Q+C +K++ KGL V V GG S+ I K H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 691 IVVGSPGRL 717
IVVG+PGR+
Sbjct: 123 IVVGTPGRI 131
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 99.1 bits (236), Expect = 1e-19
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 9/141 (6%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
+ +F + L E L ++GF PSP+QL VPLG+ G D++ +AKSGTGKT+ F +IA
Sbjct: 36 SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIA 95
Query: 505 LEKLNL-NNGLQVMILTPTREIAAQ----ICDVIKQI----GSHHKGLNVEVVMGGLSVN 657
LE+++ Q + L PTRE A Q ++I++ G G+ +++GGL V
Sbjct: 96 LERVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGDARGGIETCLLVGGLPVK 155
Query: 658 EDIAKFKKKVHIVVGSPGRLK 720
ED A+ + H+VVG+PGR +
Sbjct: 156 EDRARLASQPHVVVGTPGRTR 176
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 97.9 bits (233), Expect = 3e-19
Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Frame = +1
Query: 445 DLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGL 621
DL+++AKSGTGKT VFS+IALE ++L N QV+IL PTREIA QI D I+ IG +GL
Sbjct: 5 DLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEGL 64
Query: 622 NVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLK 720
V +GG D K KK HI VG+PGR+K
Sbjct: 65 RSHVFIGGTLFGPDRQKL-KKCHIAVGTPGRIK 96
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 97.9 bits (233), Expect = 3e-19
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +1
Query: 304 RDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 483
R V + +N F+++ LS L + GF+ +PIQ +PL G D++ +AK+G+GKT
Sbjct: 40 RGVPVSQN-EFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKT 98
Query: 484 VVFSIIALEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNE 660
FS+ L K+NL+ L Q +IL PTRE+A+Q+ I+++G GL V + GG S E
Sbjct: 99 AAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGRE 158
Query: 661 DIAKFKKKVHIVVGSPGRL 717
+ V IVVG+PGRL
Sbjct: 159 QADALENGVQIVVGTPGRL 177
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 97.9 bits (233), Expect = 3e-19
Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
Frame = +1
Query: 322 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 501
E TF +SE L + GF++P+PIQ +P G D+ +A++GTGKT F I
Sbjct: 3 ETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIP 62
Query: 502 ALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
+E+L+ +N +Q ++L+PTRE+A Q + ++ + KGLNV + GG + + K
Sbjct: 63 IIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALK 122
Query: 679 KKVHIVVGSPGRL 717
V +V+G+PGR+
Sbjct: 123 GTVQVVIGTPGRV 135
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 97.5 bits (232), Expect = 4e-19
Identities = 48/128 (37%), Positives = 74/128 (57%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F SM L L + GF+KP+PIQ+ +P+ G DL+ +A++GTGKT F I L +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 514 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHI 693
+ GLQ ++L PTRE+A Q+ + I + S + V + GG S+ + ++ I
Sbjct: 66 VIKGEGLQALVLCPTRELAVQVTEEISSL-SRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 694 VVGSPGRL 717
+VG+PGRL
Sbjct: 125 IVGTPGRL 132
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 97.5 bits (232), Expect = 4e-19
Identities = 51/134 (38%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFS 495
VE + F + LS+ L + + GF+KP+ IQ+ +PL ++++ +A++G+GKT F+
Sbjct: 3 VEYMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFA 62
Query: 496 IIALEKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
I +E +N NNG++ +ILTPTRE+A Q+ D I+ + +K L + + GG ++ I K
Sbjct: 63 IPLIELVNENNGIEAIILTPTRELAIQVADEIESL-KGNKNLKIAKIYGGKAIYPQI-KA 120
Query: 676 KKKVHIVVGSPGRL 717
K +IVVG+PGR+
Sbjct: 121 LKNANIVVGTPGRI 134
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 97.1 bits (231), Expect = 5e-19
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+TF + LSE L L GF++PSPIQ +P G D++ +A++GTGKT F + +
Sbjct: 6 LTFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIV 65
Query: 508 EKL-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
E+L +Q ++LTPTRE+A Q+ + I +IG H + + + GG S+ I +
Sbjct: 66 ERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHAR-VKTIAIYGGQSIERQIRSLRFG 124
Query: 685 VHIVVGSPGRL 717
V +V+G+PGR+
Sbjct: 125 VDVVIGTPGRI 135
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 96.3 bits (229), Expect = 9e-19
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 510
F + L+E L +I GF+ P+ +Q +P L + DL+ A++GTGKT F ++
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 511 KLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
K++ NN Q +IL+PTRE+ QI + +K + KG+NV V GG S+ E K+
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 688 HIVVGSPGRLKTSYCRK 738
I+V +PGR++ R+
Sbjct: 124 QIIVATPGRMQDMINRR 140
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 96.3 bits (229), Expect = 9e-19
Identities = 49/138 (35%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF + LS+ L + S GF++ +PIQ +P G D++ +A++GTGKT F + L+
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
K++ + +Q +++ PTRE+A Q+ + + +IG HK + + + GG +N I KK
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQIRALKKHP 121
Query: 688 HIVVGSPGRLKTSYCRKS 741
HI+VG+PGR+ RK+
Sbjct: 122 HIIVGTPGRILDHINRKT 139
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 95.5 bits (227), Expect = 2e-18
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
DLR +T DV + F L L G+ G++ PS IQ +P+ G D+L
Sbjct: 68 DLR--IKTLDVTSTKGNEFEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILAR 124
Query: 460 AKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVV 636
AK+GTGK+ + I LE+L+L + +Q M++ PTRE+A Q+ + Q+ H G V
Sbjct: 125 AKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMAT 184
Query: 637 MGGLSVNEDIAKFKKKVHIVVGSPGRL 717
GG ++ +D+ + H+V+ +PGR+
Sbjct: 185 TGGTNLRDDVMRLDDTGHVVIATPGRI 211
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 95.5 bits (227), Expect = 2e-18
Identities = 51/130 (39%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLL-EAKSGTGKTVVFSIIALE 510
F M LS+ L+ + G++ P+PIQ +PL G + ++ +A++GTGKT F I +E
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+L+ N +Q ++LTPTRE+A Q+C+ I + + K LN+ V GG+S+ I K++V
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGN-KRLNLLPVYGGVSIGNQIRALKRRV 122
Query: 688 HIVVGSPGRL 717
+VVG+PGR+
Sbjct: 123 DLVVGTPGRI 132
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 95.1 bits (226), Expect = 2e-18
Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
++ + M LS A L ++ + +PSPIQ +PL G D+L +A++GTGKT F I
Sbjct: 3 DINYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPI 62
Query: 505 LEKLN---LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
+E+L + Q +ILTPTRE+A Q+ D I ++ +H + +NV V GG + + K
Sbjct: 63 IERLEHGPNSRNPQALILTPTRELAVQVRDEIAKL-THGQRINVVAVYGGKPLRSQMEKL 121
Query: 676 KKKVHIVVGSPGRL 717
K+ HIVVG+PGR+
Sbjct: 122 KRAPHIVVGTPGRV 135
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 95.1 bits (226), Expect = 2e-18
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Frame = +1
Query: 352 SEFTLAGLISS-----GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL 516
SEF ++G I+ GF+ +PIQ +P+ G D++ EA++GTGKT F+I LE L
Sbjct: 7 SEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLENL 66
Query: 517 NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIV 696
Q +I+ PTRE+ Q+ + IK+IG + K + V V GG S+ IA+ ++ VH++
Sbjct: 67 EAERVPQALIICPTRELCLQVSEEIKRIGKYMK-VKVLAVYGGQSIGNQIAQLRRGVHVI 125
Query: 697 VGSPGRL 717
V +PGRL
Sbjct: 126 VATPGRL 132
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 94.7 bits (225), Expect = 3e-18
Identities = 47/129 (36%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + LS+ + + G++ PSPIQ +P G D+L +A++GTGKT F++ L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 514 LNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
LN QV++L PTRE+A Q+ + ++ + G V V GG S + +A K+ VH
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 691 IVVGSPGRL 717
++VG+PGR+
Sbjct: 137 VIVGTPGRV 145
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 94.7 bits (225), Expect = 3e-18
Identities = 46/123 (37%), Positives = 73/123 (59%)
Frame = +1
Query: 349 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 528
L +F L G+ +GF PSP+Q +P+ G DL+ +A++GTGKT F+I L LN N
Sbjct: 52 LKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRNK 111
Query: 529 GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSP 708
++ +I+TPTRE+A QI + I ++G + + + GG S+ +KK ++ +P
Sbjct: 112 DIEALIITPTRELAMQISEEILKLGRFGR-IKTICMYGGQSIKRQCDLLEKKPKAMIATP 170
Query: 709 GRL 717
GRL
Sbjct: 171 GRL 173
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 94.7 bits (225), Expect = 3e-18
Identities = 54/137 (39%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Frame = +1
Query: 313 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 492
+IV+N F M L E L G+ + GF+KPS IQ + G+D++ +A+SGTGKT F
Sbjct: 30 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATF 87
Query: 493 SIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIA 669
+I L++L + Q ++L PTRE+A QI VI +G + G +GG +V ++
Sbjct: 88 AISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGD-YMGATCHACIGGTNVRNEMQ 146
Query: 670 KFKKKV-HIVVGSPGRL 717
K + + HIVVG+PGR+
Sbjct: 147 KLQAEAPHIVVGTPGRV 163
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 94.3 bits (224), Expect = 4e-18
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
V+FT L +A L+ GF +P+PIQ +PL G DL+ +A++GTGKT F + L
Sbjct: 55 VSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLL 114
Query: 508 EKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
++ + +Q ++L PTRE+A Q+ D + S G NV VV GG S + ++
Sbjct: 115 NNIDFSKKCVQALVLAPTRELAQQVGDALATY-SGDDGRNVLVVYGGSSYQAQVGGLRRG 173
Query: 685 VHIVVGSPGRL 717
+VVG+PGRL
Sbjct: 174 ARVVVGTPGRL 184
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 93.9 bits (223), Expect = 5e-18
Identities = 49/137 (35%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + +SE L S +P+P+QL +P D++ +A++GTGKT+ F + LE+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 514 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
+N+ +Q +I+TPTRE+A QI K++ + KG+N+ GG V + + K K +H
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKL-AEVKGINILAAYGGQDVEQQLRKLKGSIH 123
Query: 691 IVVGSPGRLKTSYCRKS 741
I++G+PGRL RK+
Sbjct: 124 IIIGTPGRLLDHLRRKT 140
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 93.9 bits (223), Expect = 5e-18
Identities = 46/130 (35%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF + LS+ + + GF++ +PIQ +PL D++ +A++GTGKT F I +E
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 511 KLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
K+N+ N+ +Q +++ PTRE+A Q+ + + +IG+ K + V + GG + I KK
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGA-VKRVRVLPIYGGQDIERQIRALKKHP 121
Query: 688 HIVVGSPGRL 717
H++VG+PGR+
Sbjct: 122 HVIVGTPGRI 131
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 93.5 bits (222), Expect = 6e-18
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Frame = +1
Query: 301 TRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 480
TR + + ++ F M LSE L G+ P+P+Q G DL++ +K+GTGK
Sbjct: 20 TRPAEYIADIGFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGK 79
Query: 481 TVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVN 657
T F + LEK+ + ++ +IL PTRE+A Q+ D +K + + HKGL + + GG S+
Sbjct: 80 TAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKML-AKHKGLKIAAIYGGASMK 138
Query: 658 EDIAKFKKKVHIVVGSPGRL 717
+ ++ I+VG+PGR+
Sbjct: 139 QQEDALEEGTPIIVGTPGRV 158
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 93.1 bits (221), Expect = 9e-18
Identities = 53/138 (38%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Frame = +1
Query: 313 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 492
Q+ EN F S+ LS L GL S G+ KPSPIQ +P+ G D++ A +G+GKT F
Sbjct: 228 QMYEN--FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAF 285
Query: 493 SIIALEKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNE 660
I +E+L +V++L PTRE+A Q+ DV KQI G+ + +GGL++ +
Sbjct: 286 MIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQ 345
Query: 661 DIAKFKKKVHIVVGSPGR 714
K + IV+ +PGR
Sbjct: 346 QEQMLKSRPDIVIATPGR 363
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 92.7 bits (220), Expect = 1e-17
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F M L L L + F P+PIQL +P G D+L EA++GTGKT F + AL
Sbjct: 8 LSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPAL 67
Query: 508 EKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
K++ + QV+++TPTRE+A Q+ + ++ + +G+ V V GG + K+
Sbjct: 68 AKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQG 127
Query: 685 VHIVVGSPGRL 717
IVVG+PGRL
Sbjct: 128 TAIVVGTPGRL 138
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 92.7 bits (220), Expect = 1e-17
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
R + + + F S+ + E L + G+Q P+PIQ +PL G DLL A++GTG
Sbjct: 72 RNQTTDHTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTG 131
Query: 478 KTVVFSIIALEKLNL------NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVM 639
KT F+I L+ LN ++ +I+TPTRE+A QI + K G H GL V+
Sbjct: 132 KTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYG-RHTGLTSTVIF 190
Query: 640 GGLSVNEDIAKFKKKVHIVVGSPGRL 717
GG++ N A +K + I++ +PGRL
Sbjct: 191 GGVNQNPQTASLQKGIDILIATPGRL 216
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 92.7 bits (220), Expect = 1e-17
Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF L+E L L S G+ PS +Q +P G +L++ +K+G+GKT F+I E
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+N++ N +Q +I+ PTRE+A Q+ D I IG K + + G S+ + IA+ K++V
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIG-RLKKVRCSAIFGKQSIKDQIAELKQRV 122
Query: 688 HIVVGSPGRL 717
HIVV +PGR+
Sbjct: 123 HIVVATPGRI 132
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 92.3 bits (219), Expect = 1e-17
Identities = 48/132 (36%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
N++F + +S+ + L GF P+ IQ +P G D++ ++++GTGKT FS+
Sbjct: 2 NLSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPI 61
Query: 505 LEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
LE+L+ +Q ++LTPTRE+A Q+ D + Q + GL + GG S++ + + K+
Sbjct: 62 LERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVG-NSGLRTLAIYGGQSIDRQMLQLKR 120
Query: 682 KVHIVVGSPGRL 717
VHIVVG+PGR+
Sbjct: 121 GVHIVVGTPGRV 132
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 92.3 bits (219), Expect = 1e-17
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+TF LS + + GF++ +PIQ +PLG D++ +A++GTGKT F I +
Sbjct: 3 ITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLV 62
Query: 508 EKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
EK+N + +Q +++ PTRE+A Q+ + + +IG K V + GG + I KK
Sbjct: 63 EKINPESPNIQAIVIAPTRELAIQVSEELYKIG-QDKRAKVLPIYGGQDIGRQIRALKKN 121
Query: 685 VHIVVGSPGRL 717
+I+VG+PGRL
Sbjct: 122 PNIIVGTPGRL 132
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 91.9 bits (218), Expect = 2e-17
Identities = 53/138 (38%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF +M L E L G+ + GF+KPS IQ + G D++ +++SGTGKT FSI L+
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
L++ Q +IL PTRE+A QI + +G + + +GG +V EDI K
Sbjct: 99 CLDIQVRETQALILAPTRELAVQIQKGLLALGD-YMNVQCHACIGGTNVGEDIRKLDYGQ 157
Query: 688 HIVVGSPGRLKTSYCRKS 741
H+V G+PGR+ R+S
Sbjct: 158 HVVAGTPGRVFDMIRRRS 175
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 91.9 bits (218), Expect = 2e-17
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
Query: 514 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV- 687
+ NG + V+++ TRE+A QI ++ + + V V GGLS+ +D KK
Sbjct: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP 165
Query: 688 HIVVGSPGRLKTSYCRKSY 744
H+VVG+PGR+ +S+
Sbjct: 166 HVVVGTPGRILALVRNRSF 184
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 91.5 bits (217), Expect = 3e-17
Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F + L L L G++ PSPIQ +P G DLL EA++GTGKT F++ L+
Sbjct: 45 SFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLD 104
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+L+L QV++L PTRE+A Q+ + ++ + G +V V GG S+ + + +
Sbjct: 105 RLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGA 164
Query: 688 HIVVGSPGRLKTSYCRKS 741
H++VG+PGR+ RKS
Sbjct: 165 HVIVGTPGRVMDHIERKS 182
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 91.5 bits (217), Expect = 3e-17
Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F ++ L L + G++ P+PIQ +P G DLL +A++GTGKT F++ +EK
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 514 LNLNNGL--QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
L N L +V+++TPTRE+A Q+ + K S + GG I K+KV
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
Query: 688 HIVVGSPGRL 717
+VVG+PGR+
Sbjct: 173 DVVVGTPGRI 182
>UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-box
corepressor DP103 alpha; n=2; Dictyostelium
discoideum|Rep: Similar to Mus musculus (Mouse).
DEAD-box corepressor DP103 alpha - Dictyostelium
discoideum (Slime mold)
Length = 837
Score = 91.5 bits (217), Expect = 3e-17
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
RT D++I +N+TF+ +LL + L GL G+Q+PSPIQL +PLG G DL+ +AKSGTG
Sbjct: 33 RTNDIEIEDNITFSELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGTG 92
Query: 478 KTVVFSIIALE 510
KT+VF +IALE
Sbjct: 93 KTIVFGVIALE 103
Score = 48.8 bits (111), Expect = 2e-04
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 13/75 (17%)
Frame = +1
Query: 538 VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV-------------NEDIAKFK 678
V+I+ PTREIA QI DVIK I + K + EV +GGL+ NED+ +
Sbjct: 152 VLIIAPTREIAVQIKDVIKSISKYCKRIKCEVFIGGLNSNNNKDENNNNILNNEDVNRL- 210
Query: 679 KKVHIVVGSPGRLKT 723
I+VG+PG++K+
Sbjct: 211 NGTQIIVGTPGKIKS 225
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 91.1 bits (216), Expect = 3e-17
Identities = 50/129 (38%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F SE L L G+ PSPIQ P G DL+ +A++GTGKT F++ LE+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 514 LNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
L QV++L PTRE+A Q+ D K + H L V V GG I+ ++ V
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVD 192
Query: 691 IVVGSPGRL 717
+VVG+PGR+
Sbjct: 193 VVVGTPGRV 201
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 91.1 bits (216), Expect = 3e-17
Identities = 54/141 (38%), Positives = 87/141 (61%), Gaps = 2/141 (1%)
Frame = +1
Query: 301 TRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 480
T DVQ N TF S+++ + TL +K +Q +P+G G D+L++AKSGTGK
Sbjct: 15 TLDVQ--SNCTFESLMIGQKTL--------EKLKSVQAKAIPVGLLGRDMLVQAKSGTGK 64
Query: 481 TVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVN 657
T+VFS++A+E L+L + +Q +I+TPTREI+ QI + ++++ G V GG+
Sbjct: 65 TLVFSVLAVENLDLKAHYIQKVIITPTREISTQIKETVRKLTP--AGARTSVYTGGIGHK 122
Query: 658 EDIAKFKK-KVHIVVGSPGRL 717
++ KK + IV+G+PGR+
Sbjct: 123 LNVIDLKKTRPQIVIGTPGRV 143
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 91.1 bits (216), Expect = 3e-17
Identities = 46/142 (32%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
+E +F+ + LS + + G+++P+PIQ +PL G D+ +A +GTGKT F I
Sbjct: 1 MEIPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGI 60
Query: 499 IALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
A+E N +Q ++L P+RE+A Q+ + ++ H KG+++ V GG + I
Sbjct: 61 PAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKAL 120
Query: 676 KKKVHIVVGSPGRLKTSYCRKS 741
+ V I++G+PGR+ RK+
Sbjct: 121 SRGVQIIIGTPGRVIDHIKRKT 142
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 91.1 bits (216), Expect = 3e-17
Identities = 52/151 (34%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
+L+ D +I + F + +S+ TL GL S F K + IQ +P+ G D+L
Sbjct: 25 NLKTKIDEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAA 84
Query: 460 AKSGTGKTVVFSIIALEKLNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLN 624
AK+G+GKT+ F + +EKL +GL +I++PTRE+A QI +V+ +IGS H +
Sbjct: 85 AKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGS-HTSFS 143
Query: 625 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+V+GG V ++ + +++I++G+PGR+
Sbjct: 144 AGLVIGGKDVKFELERI-SRINILIGTPGRI 173
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 90.6 bits (215), Expect = 5e-17
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
+ N+ F + L E L + GF++PS IQ +P+ G D++ +A++GTGKT F
Sbjct: 1 MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGC 60
Query: 499 IALEKLNLN---NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIA 669
+ + + + +IL PTRE+A Q+ + + ++G H K L+V + GG ++ I
Sbjct: 61 AIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEK-LSVLPIYGGQPIDRQIR 119
Query: 670 KFKKKVHIVVGSPGRLKTSYCRKS 741
K V IVVG+PGR+ RKS
Sbjct: 120 ALKNGVDIVVGTPGRVLDLIRRKS 143
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 90.2 bits (214), Expect = 6e-17
Identities = 47/140 (33%), Positives = 80/140 (57%), Gaps = 1/140 (0%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
V FT + L+ + + GF++ +PIQ +PL G DL+ +A++GTGKT F I +
Sbjct: 2 VKFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMV 61
Query: 508 EKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
E + + G+Q +++ PTRE+A Q+ + + +IG +G+ + GG + ++
Sbjct: 62 EAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGK-VRGIRSVAIYGGQDFRSQVKALEEL 120
Query: 685 VHIVVGSPGRLKTSYCRKSY 744
HIVVG+PGRL + R+ Y
Sbjct: 121 PHIVVGTPGRL-LEHMRREY 139
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 90.2 bits (214), Expect = 6e-17
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 514 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV- 687
L G + V+++ TRE+A QI ++ + + V V GGLS+ +D KK
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
Query: 688 HIVVGSPGRL 717
HIVVG+PGR+
Sbjct: 167 HIVVGTPGRI 176
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 89.8 bits (213), Expect = 8e-17
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 510
F + LS+ L GL GF+ P+ IQ +P L K D + A++GTGKT F + L+
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 511 KLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+++N+ +Q +IL PTRE+A QIC ++Q+ H LNV V GG ++ I ++
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGA 134
Query: 688 HIVVGSPGRL 717
I+V +PGRL
Sbjct: 135 QIIVATPGRL 144
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 89.8 bits (213), Expect = 8e-17
Identities = 45/129 (34%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + LSE L L G++ PSPIQ +PL D+L +A++GTGKT F++ L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 514 LNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
+++ Q ++L PTRE+A Q+ + ++ ++ G +V + GG S ++ ++ VH
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 691 IVVGSPGRL 717
+VVG+PGR+
Sbjct: 129 VVVGTPGRV 137
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 89.8 bits (213), Expect = 8e-17
Identities = 49/129 (37%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + LS L L S G++ PSPIQ + D++ +A++GTGKT F + L+K
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 514 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
+NLN N Q++IL PTRE+A Q+ + ++ KG +V + GG S + + K+ VH
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 691 IVVGSPGRL 717
+VG+PGR+
Sbjct: 134 AIVGTPGRV 142
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 89.4 bits (212), Expect = 1e-16
Identities = 42/120 (35%), Positives = 73/120 (60%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 564
GF+ P+PIQ +PL G +L+ +A +GTGKT + + L+++ QV+I+TPTRE
Sbjct: 21 GFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGKKAQVLIVTPTRE 80
Query: 565 IAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKTSYCRKSY 744
+A Q+ D + ++G + K + V GG ++ I ++ V ++VG+PGR+ RK++
Sbjct: 81 LALQVADEVAKLGKYLK-VRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTF 139
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 89.0 bits (211), Expect = 1e-16
Identities = 44/133 (33%), Positives = 77/133 (57%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
+ +F + LS LA L +GF+ P+PIQ +P G D++ A +GTGKT F +
Sbjct: 1 MSTTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLL 60
Query: 499 IALEKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
+++L G + ++L PTRE+A QI + +++ G H + + V++GG+ + + +
Sbjct: 61 PLIDRLAGKPGTRALVLAPTRELALQIGEELERFG-HARRVRGAVIIGGVGMAQQAEALR 119
Query: 679 KKVHIVVGSPGRL 717
+K IV+ +PGRL
Sbjct: 120 QKREIVIATPGRL 132
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 88.6 bits (210), Expect = 2e-16
Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGF-DLLLEAKSGTGKTVVFSIIAL 507
+F ++ LS+ L L GF P+PIQ +P+ G D++ +A++GTGKT F I L
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 508 EKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
E ++ ++ Q +IL PTRE+A Q+ + I I K LNV V GG S++ I + ++
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGS-KRLNVFPVYGGQSIDRQIRELRRG 121
Query: 685 VHIVVGSPGRLKTSYCRKS 741
V IVVG+PGR+ R++
Sbjct: 122 VQIVVGTPGRILDHISRRT 140
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 88.6 bits (210), Expect = 2e-16
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF + L L L G++KPSPIQ +P G D+L A++G+GKT FS+ L+
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
L+ Q+++L PTRE+A Q+ + + H +G+NV + GG + + ++
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 688 HIVVGSPGRL 717
IVVG+PGRL
Sbjct: 127 QIVVGTPGRL 136
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 88.2 bits (209), Expect = 2e-16
Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + +SE L +G + +PIQ +P+ G D++ +AK+GTGKT+ F + LEK
Sbjct: 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEK 66
Query: 514 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
++ + +Q +I+ PTRE+A QI IK++ + +NV + GG V + + K K H
Sbjct: 67 IDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTH 126
Query: 691 IVVGSPGRL 717
IVV +PGRL
Sbjct: 127 IVVATPGRL 135
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 87.8 bits (208), Expect = 3e-16
Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Frame = +1
Query: 355 EFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN--- 525
+FTL L G+++P+PIQ +PL G DLL EA++GTGKT F++ +EKL+ N
Sbjct: 16 QFTLKNL---GYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPID 72
Query: 526 --NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVV 699
++ ++L PTRE+A Q+ D + G G+ V V GG+ V I + K+ I+V
Sbjct: 73 GYRPVRALVLAPTRELAIQVADNTLEYG-RDLGMRVISVYGGVPVENQIKRLKRGTDILV 131
Query: 700 GSPGRL 717
+PGRL
Sbjct: 132 ATPGRL 137
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 87.8 bits (208), Expect = 3e-16
Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 5/147 (3%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
+++F + LS L + G+ +PS IQ +P G D++ A++GTGKT F++
Sbjct: 4 SMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPL 63
Query: 505 LEKLN-----LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIA 669
LE L+ +N ++ ++LTPTRE+AAQ+ + +K G H L VV GG+ +N +
Sbjct: 64 LEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYG-QHLSLKSTVVFGGVKINPQMM 122
Query: 670 KFKKKVHIVVGSPGRLKTSYCRKSY*F 750
++ I++ +PGR+ Y +K+ F
Sbjct: 123 ALRRGADILIATPGRMMDLYNQKAVRF 149
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 87.8 bits (208), Expect = 3e-16
Identities = 43/129 (33%), Positives = 74/129 (57%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
FT L + A + +GF++PSP+Q +PL G D++ +A++GTGKT F + +
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 514 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHI 693
+ + ++ +++ PTRE+A Q+ D + + G GL V GG + + I + K+ I
Sbjct: 63 MKADGSVEGLVIVPTRELAMQVSDELFRFGK-LSGLKTATVYGGTAYGKQIERI-KQASI 120
Query: 694 VVGSPGRLK 720
VV +PGRL+
Sbjct: 121 VVATPGRLQ 129
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 87.8 bits (208), Expect = 3e-16
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F+S+ LS + G+ PSPIQ +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 508 EKLNLNN-----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAK 672
E L+ N ++ ++LTPTRE+AAQ+ + ++ G + L VV GG+ +N I K
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGK-YLPLRSAVVFGGVPINPQIQK 119
Query: 673 FKKKVHIVVGSPGRL 717
+ V ++V +PGRL
Sbjct: 120 LRHGVDVLVATPGRL 134
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 87.8 bits (208), Expect = 3e-16
Identities = 48/133 (36%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F+ + +S TL GL + G+ + + IQ +P G D++ +A++G+GKT+ + I LE
Sbjct: 73 FSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLAYVIPILEN 132
Query: 514 LNLNN-----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
+ +N GL +ILTPTRE+A+Q+ DVIK+IG H L+ ++GG + + ++
Sbjct: 133 IYRDNYCSIDGLLSLILTPTRELASQVFDVIKEIGKFHSTLSAGCIVGGKDIKSESSRI- 191
Query: 679 KKVHIVVGSPGRL 717
++I+V +PGRL
Sbjct: 192 NMLNILVATPGRL 204
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 87.4 bits (207), Expect = 4e-16
Identities = 48/125 (38%), Positives = 80/125 (64%), Gaps = 2/125 (1%)
Frame = +1
Query: 373 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 549
L +G+++P+PIQ +PL G+D+L +A +GTGKT F+I +EKL ++ ++L
Sbjct: 15 LEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVL 74
Query: 550 TPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK-KKVHIVVGSPGRLKTS 726
TPTRE+A Q+ + I + + +K L+ V GG SV +++ + K V I++G+PGR+K
Sbjct: 75 TPTRELAIQVKEQIYML-TKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRIKDL 133
Query: 727 YCRKS 741
RK+
Sbjct: 134 IDRKA 138
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 87.4 bits (207), Expect = 4e-16
Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Frame = +1
Query: 292 STRTRDVQIVENVT-FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 468
S+ RD + + +T F M LS+ L ++ F P+P+Q +P G D+L A++
Sbjct: 14 SSHKRDPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQT 73
Query: 469 GTGKTVVFSIIALEKLNLNN--GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMG 642
GTGKT+ F I ALE L G+QV+IL PTRE+A Q+ V +Q+ K + +VMG
Sbjct: 74 GTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQL-KGKKLKSAALVMG 132
Query: 643 GLSVNEDIAKFKKKVHIVVGSPGRLK 720
G S I + +VV +PGRL+
Sbjct: 133 GTSERNQIQSIRSGARVVVATPGRLE 158
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 87.4 bits (207), Expect = 4e-16
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+TF + L++ L L G++KPSPIQ +P G D+L A++GTGKT F+ L
Sbjct: 1 MTFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPIL 60
Query: 508 EKLN----LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
++L ++ +ILTPTRE+A QI + + G H L V+ GG+ + K
Sbjct: 61 QRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGK-HLPLRSAVIFGGVGQQPQVDKL 119
Query: 676 KKKVHIVVGSPGRL 717
KK V I+V +PGRL
Sbjct: 120 KKGVDILVATPGRL 133
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 87.4 bits (207), Expect = 4e-16
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 514 L--NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
L + NN V+++ TRE+A QI ++ + + V V GG+++ +D K
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGT 162
Query: 688 -HIVVGSPGRL 717
HIVVG+PGR+
Sbjct: 163 PHIVVGTPGRI 173
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 87.0 bits (206), Expect = 6e-16
Identities = 48/134 (35%), Positives = 82/134 (61%), Gaps = 5/134 (3%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F + LS TL GL G+ KP+ IQ + LG G D+L A++G+GKT+ F I LE
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 511 KLNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
+L +GL +++TPTRE+A QI + ++++G HH+ + +++GG + + +
Sbjct: 112 RLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHE-FSAGLIIGGKDLKFERNRM 170
Query: 676 KKKVHIVVGSPGRL 717
+ +IV+G+PGR+
Sbjct: 171 -DQCNIVIGTPGRI 183
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 87.0 bits (206), Expect = 6e-16
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F+S+ LS + G+ PSPIQ +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 508 EKLNLNN-----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAK 672
E L+ N ++ ++LTPTRE+AAQ+ + ++ G + L VV GG+ +N I K
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGK-YLPLRSAVVFGGVPINPQIQK 119
Query: 673 FKKKVHIVVGSPGRL 717
+ V ++V +PGRL
Sbjct: 120 LRHGVDVLVATPGRL 134
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 86.6 bits (205), Expect = 7e-16
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F SM LS+ + G++ G++ P+PIQ +P+ G D++ A++G+GKT F I EK
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 514 L---NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
L G + +IL+PTRE+A Q IK+IG GL V++GG S++ +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIG-RFTGLKSSVILGGDSMDNQFSAIHGN 158
Query: 685 VHIVVGSPGR 714
I+V +PGR
Sbjct: 159 PDIIVATPGR 168
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 86.6 bits (205), Expect = 7e-16
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
V + TF + L L+ L + G++ PS IQ +P G D+L +A++GTGKT F++
Sbjct: 6 VASPTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFAL 65
Query: 499 IALEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
L +L+L QV++L PTRE+A Q+ Q G KGL V + GG E ++
Sbjct: 66 PLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGL 125
Query: 676 KKKVHIVVGSPGRL 717
++ ++VG+PGR+
Sbjct: 126 RRGAQVIVGTPGRV 139
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 86.6 bits (205), Expect = 7e-16
Identities = 52/145 (35%), Positives = 86/145 (59%), Gaps = 5/145 (3%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
R +++ E F+ +S+ TL GL+ +GF P+ IQ G+P+ G D+L AK+G+G
Sbjct: 40 RCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSG 99
Query: 478 KTVVFSIIALE-----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMG 642
KT+ F I +E K +GL ++++PTRE+A Q +V+ +IG+ H L+ +++G
Sbjct: 100 KTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKH-DLSAGLIIG 158
Query: 643 GLSVNEDIAKFKKKVHIVVGSPGRL 717
G + + K K +IVV +PGRL
Sbjct: 159 GKDLKNE-QKRIMKTNIVVCTPGRL 182
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 86.6 bits (205), Expect = 7e-16
Identities = 40/127 (31%), Positives = 71/127 (55%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F L + + +G+ +P+ +Q +P+ G DL++ +K+G+GKT + I +
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 514 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHI 693
G++ +IL PTRE+A Q+ V + +G G+ VV GG+S+N+ I + +I
Sbjct: 64 TAKEKGIRALILLPTRELAVQVAKVSEALGK-RSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 694 VVGSPGR 714
+VG+PGR
Sbjct: 123 IVGTPGR 129
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 86.6 bits (205), Expect = 7e-16
Identities = 43/129 (33%), Positives = 78/129 (60%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F + + + L + F++P+ IQ +PL G D++ A +G+GKT+ F ++
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 511 KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
K+ NG++ ++LTPTRE+A Q+ + +K+ S HK L V + GG+++N I + ++
Sbjct: 63 KIEKGNGIRALVLTPTRELAEQVQNSLKEF-SRHKQLRVAPIYGGVAINPQIRQL-ERAD 120
Query: 691 IVVGSPGRL 717
+VV +PGRL
Sbjct: 121 VVVATPGRL 129
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 86.2 bits (204), Expect = 1e-15
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 21 DTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAM 80
Query: 460 AKSGTGKTVVFSIIALEKL---NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 630
A++G+GKT F I E+L G + +IL+PTRE+A Q K++G K L
Sbjct: 81 ARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELGKFTK-LKTA 139
Query: 631 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+++GG S+++ A + I++G+PGRL
Sbjct: 140 LILGGDSMDDQFAALHENPDIIIGTPGRL 168
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 86.2 bits (204), Expect = 1e-15
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+TF ++ L E L L G+ P+PIQ +P+ G DLL A++GTGKT FSI L
Sbjct: 1 MTFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPIL 60
Query: 508 EKL---NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
+KL + G++ ++LTPTRE+A QI + + G + GL V+ GG+ +
Sbjct: 61 QKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYG-RYTGLKHAVIFGGVGQKPQTDALR 119
Query: 679 KKVHIVVGSPGRL 717
+ I+V +PGRL
Sbjct: 120 SGIQILVATPGRL 132
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 86.2 bits (204), Expect = 1e-15
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + L+ L L +G+ KP+PIQ +PL G DLL A++GTGKT F++ L +
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 514 LNL------NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
L NG +V++L PTRE+ +QI D + S H+ + V + GG+S +
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESF-SRHQPVRVTTIFGGVSQVHQVKAL 127
Query: 676 KKKVHIVVGSPGRL 717
++ V I+V +PGRL
Sbjct: 128 EEGVDIIVAAPGRL 141
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 86.2 bits (204), Expect = 1e-15
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
FT L E + L + +P+PIQ +PL G D++ ++K+G+GKT F+I E
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 514 LNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
+ L Q ++L PTRE+A Q+ D I +G K + V VV GG ++ K+K H
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVG-RMKRVKVPVVFGGFPFDKQALTLKQKSH 124
Query: 691 IVVGSPGRL 717
IVVG+PGR+
Sbjct: 125 IVVGTPGRV 133
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 86.2 bits (204), Expect = 1e-15
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
FT + L++ L L G+ P+PIQ +PL G DLL A++GTGKT F++ L +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 514 LNLN------NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
L + G + ++L+PTRE+A QI + + G H GL V + GG+ +
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGK-HMGLTVATIFGGVKYGPQMKAL 185
Query: 676 KKKVHIVVGSPGRLKTSYCRKS 741
V +VV +PGRL KS
Sbjct: 186 AAGVDVVVATPGRLMDHLGEKS 207
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 86.2 bits (204), Expect = 1e-15
Identities = 48/140 (34%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Frame = +1
Query: 301 TRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 480
+ DV+ E + + S+ L L + G+ PSP+Q+ +P G +LL+ +K+GTGK
Sbjct: 99 SEDVRETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGK 158
Query: 481 TVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVN 657
T + + L +N + +Q +IL P RE+A QI +K++ S G+ V+GG S+
Sbjct: 159 TASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRM-SEGTGVISAPVVGGTSMQ 217
Query: 658 EDIAKFKKKVHIVVGSPGRL 717
+DI + VH++VG+PGR+
Sbjct: 218 DDIIRVSNGVHVMVGTPGRI 237
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 85.8 bits (203), Expect = 1e-15
Identities = 41/130 (31%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F + L E L + GF +PSPIQ +P G D++ +A++GTGKT F + L+
Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65
Query: 511 KLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+++ + +Q ++L PTRE+A Q+ + + + H +G+ + V GG + + ++
Sbjct: 66 RIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGA 125
Query: 688 HIVVGSPGRL 717
+VVG+PGR+
Sbjct: 126 QVVVGTPGRI 135
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 85.8 bits (203), Expect = 1e-15
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Frame = +1
Query: 271 LAHDLRNST-RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFD 447
+AH L R+ DV + TF + L L GL + F P+ IQ +P+ D
Sbjct: 5 IAHSLAGGEERSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMD 64
Query: 448 LLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLN 624
L++++KSGTGKT+++ I ++ N N N MI+ PTRE+A Q+ D + +
Sbjct: 65 LIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFK 124
Query: 625 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKTSY 729
+GG V +D K + +++G+PGRL Y
Sbjct: 125 CSAFIGGTDVAKD-RKRMNESRVIIGTPGRLLHLY 158
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 85.4 bits (202), Expect = 2e-15
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Frame = +1
Query: 307 DVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 486
D E F ++ + LA + + G+++PSPIQ +P+ G D++ +A++GTGKT
Sbjct: 16 DPMTQETGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTA 75
Query: 487 VFSIIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNED 663
F++ L +++ Q++IL PTRE+A Q+ + S G+ V V GG +
Sbjct: 76 AFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQ 135
Query: 664 IAKFKKKVHIVVGSPGRL 717
+ ++ I+V +PGRL
Sbjct: 136 LKALRQGAQILVATPGRL 153
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 85.4 bits (202), Expect = 2e-15
Identities = 51/133 (38%), Positives = 85/133 (63%), Gaps = 5/133 (3%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
FT + L E T +GL +S F+ + +Q +PL G D+L AK+G+GKT+ F + LEK
Sbjct: 55 FTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEK 114
Query: 514 L-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
L +GL +I++PTRE+A QI +V+++IG +H + +V+GG S+ E+ A+
Sbjct: 115 LYHAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNH-FFSAGLVIGGKSLKEE-AERL 172
Query: 679 KKVHIVVGSPGRL 717
+++I+V +PGR+
Sbjct: 173 GRMNILVCTPGRM 185
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 85.0 bits (201), Expect = 2e-15
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F SM LS L G++ G++ P+PIQ +PL G D++ A++G+GKT F I EK
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 514 LNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
L + G + +IL+PTRE+A Q IK++G GL +++GG ++ +
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELG-RFTGLKATIILGGDNMENQFSAIHGN 156
Query: 685 VHIVVGSPGR 714
I++ +PGR
Sbjct: 157 PDILIATPGR 166
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 85.0 bits (201), Expect = 2e-15
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F LL L ++ SGF+ PS +Q +P G D++ +AKSG GKT VF + L++
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 514 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGG--LSVNEDIAKFKKK 684
+ + G + ++L TRE+A QIC+ + ++ V V GG + +++D+ K +
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLK-NEC 166
Query: 685 VHIVVGSPGRL 717
HIVVG+PGR+
Sbjct: 167 PHIVVGTPGRV 177
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 84.6 bits (200), Expect = 3e-15
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F S+ L +F L S G++ +PIQ +PL G D++ A++GTGKT F++ L
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 514 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
+++ Q ++L PTRE+A Q+ + + G GL + + GG + + + ++ H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 691 IVVGSPGRLKTSYCRKS 741
IVV +PGRL R+S
Sbjct: 131 IVVATPGRLLDHIERRS 147
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 84.6 bits (200), Expect = 3e-15
Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK-LNLNNGLQVMILTPTR 561
G+++P+ IQ+ +P+ G D++ A++G+GKT F+I L+K L L +IL PTR
Sbjct: 60 GWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTR 119
Query: 562 EIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
E++ QI + + +GS GL+V +++GGL + + KK HI+VGSPGR+
Sbjct: 120 ELSLQIKEQLISLGS-EIGLDVCLILGGLDMVSQALQLSKKPHIIVGSPGRI 170
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 84.2 bits (199), Expect = 4e-15
Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
FT M + L L GF+KP+ IQ +P G D++ +A++GTGKT F+I L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 514 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
L+ + N +Q +++ PTRE+A QI D + +G + + +++GG+S + A V+
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCS-KIALILGGVSYEKQKAALNSGVN 121
Query: 691 IVVGSPGRLK 720
IVV +PGRL+
Sbjct: 122 IVVATPGRLE 131
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 84.2 bits (199), Expect = 4e-15
Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGF-DLLLEAKSGTGKTVVFSIIALE 510
F S LS +A + GF P+PIQ +P+ G D + A +GTGKT F I +E
Sbjct: 46 FESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIE 105
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
++ Q ++L+PTRE+A Q+ + + +G KG+ V + GG S I K+
Sbjct: 106 NIDSTVKDTQALVLSPTRELALQVAEQLTLLGKK-KGVRVVTIYGGASYRTQIDGIKRGA 164
Query: 688 HIVVGSPGRL 717
HIVV +PGRL
Sbjct: 165 HIVVATPGRL 174
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 84.2 bits (199), Expect = 4e-15
Identities = 44/134 (32%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
+E + F + +S + GF++ SPIQ +P D+ +A++GTGKT F I
Sbjct: 1 MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGI 60
Query: 499 IALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
LE ++ +N LQ +IL PTRE+A Q+ + ++++ + ++V V GG ++ I
Sbjct: 61 PLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKAL 120
Query: 676 KKKVHIVVGSPGRL 717
+K V I++G+PGR+
Sbjct: 121 QKGVQIIIGTPGRV 134
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 83.8 bits (198), Expect = 5e-15
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F + L L + +G+ +P+PIQ +P +L A++GTGKT F + L
Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60
Query: 508 EKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
+KL N G +V+I++PTRE+A QI D IK+ S + +N + GG+S F
Sbjct: 61 DKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKY-SRYLRINSITITGGISYGLQNRMF 119
Query: 676 KKKVHIVVGSPGRLKTSYCRKSY*F 750
K + I+V +PGRL Y +K F
Sbjct: 120 SKPIDILVATPGRLLDLYQQKKINF 144
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 83.8 bits (198), Expect = 5e-15
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = +1
Query: 304 RDVQIVE-NVT-FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
+D+QI NV+ F + L E L + +GF+ P+ +Q + G L+ +AK+GTG
Sbjct: 63 KDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTG 122
Query: 478 KTVVFSIIALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGG--- 645
KT VF + L +N +N ++ +++T TRE+A Q D ++G K + VE GG
Sbjct: 123 KTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGGGEP 182
Query: 646 LSVNEDIAKFKKKVHIVVGSPGRLKTSYCRK 738
+SVN + K IVVG+PGRLK C +
Sbjct: 183 VSVNIQTIE-TVKPQIVVGTPGRLKDLICER 212
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 83.8 bits (198), Expect = 5e-15
Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF + + L + G++ P+ IQ +P G D++ A++GTGKT F+I L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 511 KLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
K+++ + + Q ++L PTRE+A Q+ + + G++ LNV + GG S +A ++
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 688 HIVVGSPGRL 717
+VVG+PGR+
Sbjct: 134 QVVVGTPGRM 143
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 83.4 bits (197), Expect = 7e-15
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 134 DTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAM 193
Query: 460 AKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 630
A++G+GKT F I EKL ++ G + ++L+PTRE+A Q K++G GL +
Sbjct: 194 ARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGK-FTGLKMA 252
Query: 631 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+++GG + + A + I++ +PGRL
Sbjct: 253 LILGGDRMEDQFAALHENPDIIIATPGRL 281
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 83.4 bits (197), Expect = 7e-15
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+TF + LS+ L L + F + + IQ +PL G ++ ++ +GTGKT F + L
Sbjct: 1 MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPIL 60
Query: 508 EKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
EK+ N +Q +I+ PTRE+A QI + I+ GS + L + ++GG + + I + K
Sbjct: 61 EKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS 120
Query: 685 VHIVVGSPGRLKTSYCRKS 741
IVVG+PGR+ RK+
Sbjct: 121 -QIVVGTPGRVNDHLNRKT 138
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 83.4 bits (197), Expect = 7e-15
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F S + L + G+Q +P+Q +P + G D+L A++GTGKT F++ L+K
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 514 LN------LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
++ ++ + +ILTPTRE+AAQ+ D I S H ++V + GG+ + K
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAY-SKHMNISVLTIYGGMKMATQAQKL 121
Query: 676 KKKVHIVVGSPGRL 717
K+ I+V +PGRL
Sbjct: 122 KQGADIIVATPGRL 135
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 83.0 bits (196), Expect = 9e-15
Identities = 49/146 (33%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Frame = +1
Query: 295 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 474
T+ + ++ + S+ LSE L +G+ K + IQ +PL G D++ +A++G+
Sbjct: 70 TKGTTSSFLTDIEYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGS 129
Query: 475 GKTVVFSIIALEKLN-----LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVM 639
GKT+ F I +E LN NG +I++PTRE+A Q DV+++I +H + +++
Sbjct: 130 GKTLAFLIPIVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKILAHSERTRT-LII 188
Query: 640 GGLSVNEDIAKFKKKVHIVVGSPGRL 717
GG S ++ KK IVV +PGRL
Sbjct: 189 GGSSKKKEEEALKKGASIVVATPGRL 214
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 83.0 bits (196), Expect = 9e-15
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Frame = +1
Query: 388 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTRE 564
F+K P+Q +PL + D+L+EA +GTGKT+ + I ALE ++ N +QV+I PTRE
Sbjct: 17 FEKMMPVQEQAIPLLRERKDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRE 76
Query: 565 IAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+ QI VI Q+ S G+ +GG+ + + KKK I+VG+PGRL
Sbjct: 77 LVMQIHQVI-QLFSQGSGIKSGAFIGGVELKRQHERLKKKPQIIVGTPGRL 126
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 83.0 bits (196), Expect = 9e-15
Identities = 42/134 (31%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
V +F + LSE + G+++P+P+Q+ + G D+++ +K+GTGKT F+I
Sbjct: 17 VSQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAI 76
Query: 499 IALEKL-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
LE++ + +++ PTRE+A Q+ + + H+ L+V V GG S+ E + K
Sbjct: 77 PILERIADGRRRPSALVMCPTRELAIQVAQEFTAL-AKHRDLSVVAVYGGASMGEQLQKL 135
Query: 676 KKKVHIVVGSPGRL 717
+ I+VG+PGR+
Sbjct: 136 EAGAEIIVGTPGRI 149
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 83.0 bits (196), Expect = 9e-15
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
+ ++F + L L + + G++ PSPIQ +P G LL A++GTGKT F++
Sbjct: 21 MSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFAL 80
Query: 499 IALEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
L +++ N Q+++L PTRE+A Q+ + S + +V + GG + I
Sbjct: 81 PLLSRIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGL 140
Query: 676 KKKVHIVVGSPGRL 717
K+ ++VG+PGR+
Sbjct: 141 KRGAQVIVGTPGRM 154
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 83.0 bits (196), Expect = 9e-15
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
T+ SM L + + +G++KPSPIQ + + G +++ ++++G+GKT FSI L
Sbjct: 21 TWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSIGTLA 80
Query: 511 KLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+L L + +++I++PTRE+A Q + +K +G+ N +GG S+ D+ +K +
Sbjct: 81 RLRLTSKTTELIIVSPTRELAIQTENTLKSLGA-----NTRACVGGNSLGADVKALQKGI 135
Query: 688 HIVVGSPGRL 717
H V G+PGR+
Sbjct: 136 HCVSGTPGRI 145
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 83.0 bits (196), Expect = 9e-15
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF + LS L + G++KP+PIQ +PL G DL A +G+GKT F++ LE
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 511 KLNLNN----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
+L +V+ILTPTRE+A QI +I+ + + + +++GGLSV E +
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNL-AQFTDIKCGLIVGGLSVREQEVVLR 286
Query: 679 KKVHIVVGSPGRL 717
IVV +PGR+
Sbjct: 287 SMPDIVVATPGRM 299
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 83.0 bits (196), Expect = 9e-15
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 80 DTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAM 139
Query: 460 AKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 630
A++G+GKT F + E+L ++ G + +IL+PTRE+A Q K++G GL
Sbjct: 140 ARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGK-FTGLKTA 198
Query: 631 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+++GG + + A + I++ +PGRL
Sbjct: 199 LILGGDRMEDQFAALHENPDIIIATPGRL 227
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 82.6 bits (195), Expect = 1e-14
Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Frame = +1
Query: 379 SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTP 555
+SGFQKP+P+Q L G D++ E+ +GTGKT+ +++ LE++ Q +IL P
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 556 TREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+RE+ QI VI+ + + L ++GG +V + + K KK HI+VG+PGR+
Sbjct: 81 SRELVMQIFQVIQDWKAGSE-LRAASLIGGANVKKQVEKLKKHPHIIVGTPGRV 133
>UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase mak5 - Schizosaccharomyces pombe (Fission
yeast)
Length = 648
Score = 82.6 bits (195), Expect = 1e-14
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Frame = +1
Query: 349 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN- 525
LS L L +GF KP PIQ +P GFD++ +A +G+GKT+ F I LE N
Sbjct: 129 LSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNV 188
Query: 526 --NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVV 699
+Q +++ PTRE+A QIC + I + V + GGL+V + K H+VV
Sbjct: 189 DAKYVQALVVAPTRELAHQICQHFELI-KPSPNIRVMSITGGLAVQKQQRLLNKHPHVVV 247
Query: 700 GSPGRL 717
+PGRL
Sbjct: 248 ATPGRL 253
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 82.6 bits (195), Expect = 1e-14
Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Frame = +1
Query: 316 IVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS 495
+ + +TF + L EF L + GF+ PSPIQ +P G D+L A++G+GKT F+
Sbjct: 1 MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFA 60
Query: 496 IIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAK 672
+ L +++ Q++++ PTRE+A Q+ D + + +G + + GG + +
Sbjct: 61 LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRA 120
Query: 673 FKKKVHIVVGSPGRL 717
K+ +VVG+PGR+
Sbjct: 121 LKQGAQVVVGTPGRI 135
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 82.2 bits (194), Expect = 2e-14
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F+S+ L L L GF +P+PIQ +P G D++ A +G+GKT F + L +
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 514 L--NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
L + +++TPTRE+AAQI + + + + H ++ V GG+S+ F++ V
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDL-AVHTPISAAAVFGGVSIRPQEHAFRRGV 121
Query: 688 HIVVGSPGRL 717
+++G+PGRL
Sbjct: 122 DVLIGTPGRL 131
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 82.2 bits (194), Expect = 2e-14
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F S+ LS L + G+++P+PIQ +P G DL+ A++GTGKT F++ L
Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
Query: 508 EKL-------NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDI 666
+ L ++ +ILTPTRE+AAQI + ++ S + + VV GG+S+N +
Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY-SKYLNIRSLVVFGGVSINPQM 119
Query: 667 AKFKKKVHIVVGSPGRL 717
K + V ++V +PGRL
Sbjct: 120 MKLRGGVDVLVATPGRL 136
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 82.2 bits (194), Expect = 2e-14
Identities = 47/133 (35%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 510
FT + LS+ T GL +G+ + IQ + L G D+L A++G+GKT+ F I LE
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEI 119
Query: 511 ----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
K ++GL ++++PTRE+A QI +V+++IGS+H + +V+GG V ++ +
Sbjct: 120 LYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHT-FSAGLVIGGKDVKQEKDRL- 177
Query: 679 KKVHIVVGSPGRL 717
+++I++ +PGRL
Sbjct: 178 SRINILIATPGRL 190
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 54.4 bits (125), Expect(2) = 2e-14
Identities = 24/61 (39%), Positives = 40/61 (65%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF S+ LS ++ L ++G+ KP+P+Q +P G G DLL+ + +G+GKT F + A+E
Sbjct: 44 TFASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIE 103
Query: 511 K 513
+
Sbjct: 104 R 104
Score = 48.0 bits (109), Expect(2) = 2e-14
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 538 VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+++LTPTRE+A Q+ G H + L ++GG++ + + K I+V +PGRL
Sbjct: 140 LLVLTPTRELAMQVTTAASTYGKHLRRLRTVSILGGVAYGQQLMLLAKNPEILVATPGRL 199
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 81.8 bits (193), Expect = 2e-14
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 504
TF + +S + G++ P P+Q +P LG+ D++ A++GTGKT F +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENN-DVVALAQTGTGKTAAFGLPL 61
Query: 505 LEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
L+++++ N + Q +IL PTRE+ QI + + GL V V GG S++ I K+
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKR 121
Query: 682 KVHIVVGSPGRLKTSYCRKS 741
VHI+V +PGRL RK+
Sbjct: 122 GVHIIVATPGRLLDLMERKT 141
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 81.8 bits (193), Expect = 2e-14
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Frame = +1
Query: 307 DVQIVENVT-FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 483
D+ E+V F + L L L + G+++P+PIQ VP G DLL +A +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 484 VVFSIIALEKL----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLS 651
F++ L +L ++G Q ++L PTRE+A Q+ + I + G G V V GG
Sbjct: 109 AAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYG-RDLGARVLPVYGGAP 167
Query: 652 VNEDIAKFKKKVHIVVGSPGR 714
+ + + V +VV +PGR
Sbjct: 168 IGRQVRALVQGVDVVVATPGR 188
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/131 (31%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F+ + L++ + +I G++ P+PIQ + +P G D+L +A++GTGKT F++ +
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 514 LNL---NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
++L + QV++L PTRE+A Q+ + + + L+V + GG I K+
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 685 VHIVVGSPGRL 717
V +VVG+ GR+
Sbjct: 129 VKVVVGTTGRV 139
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 81.8 bits (193), Expect = 2e-14
Identities = 46/139 (33%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = +1
Query: 322 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 501
EN+ F + L L GL G++ PS IQ +PL D+L +K+GTGKT+ F I
Sbjct: 13 ENLKFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIP 72
Query: 502 ALEKL-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
L+ + + + G++ +IL PTRE+A QI +++++ + K +N++V V+ I K
Sbjct: 73 ILQNIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQVT----GVDSKIDKNN 128
Query: 679 KKVHIVVGSPGRLKTSYCR 735
+I++G+PG++ C+
Sbjct: 129 IDFNILLGTPGKIYDCLCK 147
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 81.8 bits (193), Expect = 2e-14
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF + L+ + +A GF+ PS IQ + +P G D++ AK+G+GKT F+I L
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+L+ + G+ +ILTPTRE+A QI + IG+ +N VV+GG+ K+
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGA-PMNVNCSVVIGGIDNVTQALILDKRP 123
Query: 688 HIVVGSPGRL 717
HI+V +PGRL
Sbjct: 124 HIIVATPGRL 133
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 81.8 bits (193), Expect = 2e-14
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Frame = +1
Query: 283 LRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEA 462
L+++ + + + E TF + LS L + GF +P+PIQ +PL G D+L A
Sbjct: 175 LQSNRKLKKIVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASA 234
Query: 463 KSGTGKTVVFSIIALEKLNLNN----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 630
+G+GKT F + LE+L + ++V+IL PTRE+A Q C + + + +
Sbjct: 235 STGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQ-CQSVMENLAQFSNITSC 293
Query: 631 VVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+++GGLS + +K +V+ +PGRL
Sbjct: 294 LIVGGLSNKAQEVELRKSPDVVIATPGRL 322
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 81.8 bits (193), Expect = 2e-14
Identities = 49/140 (35%), Positives = 80/140 (57%), Gaps = 5/140 (3%)
Frame = +1
Query: 313 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 492
+I E +F+ LS+ TL GL + KP+ IQ + G D+L AK+G+GKT+ F
Sbjct: 57 KIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAF 116
Query: 493 SIIALEKLNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVN 657
I EKL N +GL +I+TPTRE+A QI + + +IG H +++GG ++
Sbjct: 117 LIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLH-DFTTGLIIGGQNLK 175
Query: 658 EDIAKFKKKVHIVVGSPGRL 717
+ + +++I++ +PGRL
Sbjct: 176 AEKNRL-HQLNIIICTPGRL 194
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 81.8 bits (193), Expect = 2e-14
Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Frame = +1
Query: 349 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 528
L E L G+ S GF+ PS IQ + G D+ +A+SGTGKT F++ AL+ +++
Sbjct: 45 LKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQ 104
Query: 529 GL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGS 705
+ Q+++L TREIAAQ + +G G V ++ GG + D +KK HIVVG+
Sbjct: 105 DVTQILVLASTREIAAQNAARFEDLGC-FMGARVALLSGGSPIAADKVALEKKPHIVVGT 163
Query: 706 PGRLK 720
PGR++
Sbjct: 164 PGRVE 168
>UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1;
Ureaplasma parvum|Rep: ATP-dependent RNA helicase -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 443
Score = 81.4 bits (192), Expect = 3e-14
Identities = 46/128 (35%), Positives = 75/128 (58%)
Frame = +1
Query: 355 EFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL 534
++ L LI+ +P+PIQL +PL +++ A +GTGKT+ F + L L+L+ L
Sbjct: 9 KWILDSLINQKIFEPTPIQLKTMPLIAKRENIIGVAPTGTGKTLAFVLPILNNLDLSQKL 68
Query: 535 QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGR 714
QV+I+TPTRE+A QI I H L V++++GG S+++ I K +++ +P R
Sbjct: 69 QVIIITPTRELARQIFSKIIVFKKHQPLLQVKMLIGGESIDQQINSQLNKSQLLIATPTR 128
Query: 715 LKTSYCRK 738
LK R+
Sbjct: 129 LKQILTRQ 136
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 81.4 bits (192), Expect = 3e-14
Identities = 40/134 (29%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
++ + F+ + LS ++ GF++ SPIQ +P+ G D++ A++GTGKT F+I
Sbjct: 6 MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAI 65
Query: 499 IALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
+E L + + LQ +IL PTRE+ Q+ + +++ + V + GG + +
Sbjct: 66 PTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRAL 125
Query: 676 KKKVHIVVGSPGRL 717
+K IV+ +PGR+
Sbjct: 126 RKNPQIVIATPGRM 139
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 81.4 bits (192), Expect = 3e-14
Identities = 48/134 (35%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF---SI 498
++F+++ LSE LA + ++G+ P+PIQ +P D+L A++GTGKT F +
Sbjct: 1 MSFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPML 60
Query: 499 IALEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
LEK + + +IL PTRE+AAQ+ + + G+ K LNV +++GG+S + AK
Sbjct: 61 TILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQK-LNVALLIGGVSFGDQDAKL 119
Query: 676 KKKVHIVVGSPGRL 717
+ V +++ +PGRL
Sbjct: 120 TRGVDVLIATPGRL 133
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 81.4 bits (192), Expect = 3e-14
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F S+ LSE + + S G+++ + IQ +P G DL+ +AK+GTGKT F + L K
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 514 LNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
L L++ +QV+IL PTRE+ Q+ I+ + + + + GG+ + H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 691 IVVGSPGRL 717
IVVG+PGR+
Sbjct: 126 IVVGTPGRI 134
>UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 156
Score = 81.4 bits (192), Expect = 3e-14
Identities = 49/144 (34%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Frame = +1
Query: 313 QIVENV----TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 480
++VEN TFTS+ + E L F+K PIQ +PL G D++ AK+G+GK
Sbjct: 7 EVVENENHDDTFTSLKVCEGAKGVLTKLPFEKMFPIQKKAIPLLLEGADVVGAAKTGSGK 66
Query: 481 TVVFSIIAL-----EKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGG 645
T+ F I A+ + ++ + G+ V+IL PT E+A+QI DV+ + ++V + GG
Sbjct: 67 TLAFVIPAINLLISKNISKSEGIAVLILVPTHELASQIFDVVSSL-ILDLDISVGLFCGG 125
Query: 646 LSVNEDIAKFKKKVHIVVGSPGRL 717
++ DI ++K+ +++++ +PGRL
Sbjct: 126 SNIKTDIEQYKQGLNMIIATPGRL 149
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 81.4 bits (192), Expect = 3e-14
Identities = 43/128 (33%), Positives = 72/128 (56%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + + + L L GF+K PIQ +P+ G D++ +A +GTGKT +SI L++
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 514 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHI 693
+ G+Q +I+ PTRE+A QI + +K+ + K + + GG S+ + K+ I
Sbjct: 64 IKEGGGIQGLIVAPTRELAVQITEEVKKFAKYTK-VRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 694 VVGSPGRL 717
+V +PGRL
Sbjct: 123 LVATPGRL 130
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 81.4 bits (192), Expect = 3e-14
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Frame = +1
Query: 313 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 492
Q EN++F M LS L + + GF++P+PIQ +P+G G D+ A +GTGKT F
Sbjct: 213 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAF 272
Query: 493 SIIALEKLNLNNG----LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNE 660
++ LE+L +V++L PTRE+ Q+ V +Q+ + + + +GGL V
Sbjct: 273 ALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQL-AQFCNITTCLAVGGLDVKS 331
Query: 661 DIAKFKKKVHIVVGSPGRL 717
A + I++ +PGRL
Sbjct: 332 QEAALRAAPDILIATPGRL 350
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 81.0 bits (191), Expect = 4e-14
Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 4/132 (3%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F+++ + + +A L +G P IQ+ +P G D+L A +G+GKT+ F + L +
Sbjct: 231 FSALGVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSR 290
Query: 514 LNL----NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
L+ +N + +IL+PTRE+A QI D + + S GL+ ++ GG+S FK+
Sbjct: 291 LSATPREDNRPRALILSPTRELAMQIADALSSLASS-MGLSTILIAGGMSYGPQTKAFKR 349
Query: 682 KVHIVVGSPGRL 717
V +VV +PGRL
Sbjct: 350 GVDLVVATPGRL 361
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 81.0 bits (191), Expect = 4e-14
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F +M LS L ++ G++ P+PIQ +PL G D++ AK+G+GKT F I EK
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEK 99
Query: 514 L---NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
L + +G + ++LTPTRE+A Q IKQ+G L +V+GG S++ A
Sbjct: 100 LKQREIKSGARALVLTPTRELAIQTFKFIKQLGK-FTDLKTILVLGGDSMDSQFAAIHTL 158
Query: 685 VHIVVGSPGR 714
I+V +PGR
Sbjct: 159 PDIIVATPGR 168
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 81.0 bits (191), Expect = 4e-14
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Frame = +1
Query: 322 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 501
E +F M LS L GL S GF KP+PIQ +P+ G D++ A +G+GKT F +
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVP 350
Query: 502 ALEKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIA 669
LE+L +V+ILTPTRE+A Q V ++ S H + + +GGLS+ A
Sbjct: 351 ILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLAS-HTDIKFCLAVGGLSLKVQEA 409
Query: 670 KFKKKVHIVVGSPGR 714
+ + + +V+ +PGR
Sbjct: 410 ELRLRPDVVIATPGR 424
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 80.6 bits (190), Expect = 5e-14
Identities = 45/128 (35%), Positives = 70/128 (54%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F+++ LS L + F+KP+ IQ +P G DLL A +G+GKT+ + + LEK
Sbjct: 3 FSTLSLSS-ELIHALPKDFKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLLEK 61
Query: 514 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHI 693
L +N + +IL P RE+A Q+ + I Q+G GLN + GG+ + + HI
Sbjct: 62 LGVNPEQKALILVPIRELATQVSEAINQVG-QALGLNAVCLCGGVDKEQQLQALATNPHI 120
Query: 694 VVGSPGRL 717
+V + GRL
Sbjct: 121 LVATTGRL 128
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 80.6 bits (190), Expect = 5e-14
Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALE 510
F LSE L + G++KP+ IQ +P DL+ +A++GTGKT F I LE
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 511 KLNL--NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
+++ N ++ +I+TPTRE+A QI + +K + K + + + GG S+ + +K
Sbjct: 80 RIDFKANKFVKAIIVTPTRELALQIFEELKSL-KGTKRVKITTLYGGQSLEKQFKDLEKG 138
Query: 685 VHIVVGSPGRL 717
V IVVG+PGR+
Sbjct: 139 VDIVVGTPGRI 149
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 80.6 bits (190), Expect = 5e-14
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Frame = +1
Query: 307 DVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 486
D + + VTF S+ L E LA + GF+ P+PIQ +P D++ A++GTGKT
Sbjct: 38 DEEDTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTA 97
Query: 487 VFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNED 663
F + L ++ + +Q ++L PTRE+A Q I+ + L+V V GG
Sbjct: 98 AFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQ 157
Query: 664 IAKFKKKVHIVVGSPGRL 717
I K+ +VVG+PGR+
Sbjct: 158 IGALKRGAQVVVGTPGRV 175
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 80.6 bits (190), Expect = 5e-14
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Frame = +1
Query: 313 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 492
Q+ E V + + LS + + G+ + +P+Q +P D++ +A +GTGKT F
Sbjct: 7 QVNEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAF 66
Query: 493 SIIALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIA 669
I +E ++ ++ +Q ++L PTRE+A QI D ++ + +G+ + GG + + I
Sbjct: 67 GIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQIT 126
Query: 670 KFKKKVHIVVGSPGRLKTSYCRKS 741
KK IVV +PGRL R++
Sbjct: 127 TLKKHPQIVVATPGRLMDHMKRRT 150
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 80.6 bits (190), Expect = 5e-14
Identities = 40/132 (30%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F S +AG+ + G+++P+PIQ +P G D++ A++GTGKT +++ +
Sbjct: 1 MSFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPII 60
Query: 508 EK-LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
+K L+ G ++ +++ PTRE+A QI D + +G + + + GG+++++ I + +
Sbjct: 61 QKMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRAR-IRECSIYGGVNMDQQIRRLRS 119
Query: 682 KVHIVVGSPGRL 717
V +VV PGRL
Sbjct: 120 GVDVVVACPGRL 131
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 80.6 bits (190), Expect = 5e-14
Identities = 49/143 (34%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F+ + LS+ L L G+ P+PIQ +P G DLL A++GTGKT F + ++++
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 514 L-NLNNGL-----QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
L +N + ++++L PTRE+ +QI K G+ GL V+ ++GG SVN+D K
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGA-LAGLKVQSIVGGTSVNKDRNKL 122
Query: 676 KKKVHIVVGSPGRLKTSYCRKSY 744
+ I++ +PGRL +K++
Sbjct: 123 HRGTDILIATPGRLLDLIDQKAF 145
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 79.8 bits (188), Expect = 9e-14
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+TF + L L + + KP+PIQ +P D+L A +GTGKT F + AL
Sbjct: 1 MTFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPAL 60
Query: 508 EKL----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
+ L + +V+IL PTRE+A QI V+KQ+G+H VV GG + ++ +
Sbjct: 61 QFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCP-FESNVVTGGFASDKQLEIL 119
Query: 676 KKKVHIVVGSPGRL 717
+ K+ I+V +PGRL
Sbjct: 120 QSKIDILVATPGRL 133
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 79.8 bits (188), Expect = 9e-14
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Frame = +1
Query: 307 DVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 486
D V + +F + L + L+ L G+++ + IQ +P DL+ +AK+G+GKT
Sbjct: 29 DEPYVSDSSFAKLALPKSVLSNLDQLGYKEMTAIQQQALPEVLAEKDLIAKAKTGSGKTA 88
Query: 487 VFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNED 663
F I L KL N Q ++L PTRE+A + + ++++ + L + + GG +
Sbjct: 89 AFGIGLLLKLRPRNFATQALVLCPTRELATHVANELRKLARFTENLKILTLCGGQPIGPQ 148
Query: 664 IAKFKKKVHIVVGSPGRLK 720
I + H+VV +PGR+K
Sbjct: 149 IGSLEHGAHVVVRTPGRIK 167
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 79.8 bits (188), Expect = 9e-14
Identities = 41/128 (32%), Positives = 71/128 (55%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F S L + GL G++ + +Q VP+ + G D++ +A++G+GKT F + LE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 514 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHI 693
+ LQ ++L PTRE+A Q+ + + + GL++ V GG + + K V I
Sbjct: 67 CQPSGKLQALVLAPTRELANQVAQEFELL-QGNAGLSIVTVYGGTDLEKQAKTLAKGVDI 125
Query: 694 VVGSPGRL 717
+VG+PGR+
Sbjct: 126 IVGTPGRV 133
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 79.8 bits (188), Expect = 9e-14
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 373 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 549
L S G + SPIQ +P G D++ +A++G+GKT+ F I ALEK+ +N+ Q ++L
Sbjct: 19 LDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIML 78
Query: 550 TPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
PTRE+A Q+ + + V + GG + I K HI+VG+PGR+
Sbjct: 79 CPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHSPHIIVGTPGRV 134
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 79.8 bits (188), Expect = 9e-14
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F SM L E G+ G++ P+PIQ +PL G D+ A++G+GKT F + +++
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 514 LNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
L ++ G++ +IL+PTR++A Q +Q+G L + +++GG S+ + +
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGK-FTDLKISLIVGGDSMESQFEELAEN 169
Query: 685 VHIVVGSPGRL 717
I++ +PGRL
Sbjct: 170 PDIIIATPGRL 180
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 79.8 bits (188), Expect = 9e-14
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
D + + I+ N TF S+ LS+ T + GF + + IQ +P G D+L
Sbjct: 138 DKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGA 197
Query: 460 AKSGTGKTVVFSIIALE-----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLN 624
A++G+GKT+ F I A+E K NG V+++ PTRE+A Q V K++ +H
Sbjct: 198 ARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYH-SQT 256
Query: 625 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
V V+GG + K V+++V +PGRL
Sbjct: 257 VGKVIGGEKRKTEAEILAKGVNLLVATPGRL 287
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 79.8 bits (188), Expect = 9e-14
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+FT+M LS L L S F P+PIQ +PL G D+L A +G+GKT F + LE
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282
Query: 511 KLNLNN------GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE--VVMGGLSVNEDI 666
+L + +V++L PTRE+A Q C+ + + + GL+V +++GGLS+N
Sbjct: 283 RLCYRDRGKGGAACRVLVLCPTRELAVQ-CEAVGKALAEKGGLDVRFALLVGGLSLNAQA 341
Query: 667 AKFKKKVHIVVGSPGRL 717
+ I++ +PGRL
Sbjct: 342 HTLRTLPDILIATPGRL 358
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 79.8 bits (188), Expect = 9e-14
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F M LS L GL S GF KP+PIQ +P+ G D++ A +G+GKT F + LE
Sbjct: 277 SFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE 336
Query: 511 KLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
+L +V++LTPTRE+A Q V ++ S H + + +GGLS+ + +
Sbjct: 337 RLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLAS-HTDIKFCLAVGGLSLKVQEGELR 395
Query: 679 KKVHIVVGSPGR 714
+ +V+ +PGR
Sbjct: 396 LRPDVVIATPGR 407
>UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Aspergillus terreus (strain NIH 2624)
Length = 729
Score = 79.4 bits (187), Expect = 1e-13
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Frame = +1
Query: 298 RTRDVQIVENV-TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 474
R D+ + E+ FT + LSE TL+GL +S ++ + IQ V G D+L AK+G+
Sbjct: 35 RVEDLDLKESFKAFTDLPLSEPTLSGLSASHYKTLTDIQSRAVSHALKGRDILGAAKTGS 94
Query: 475 GKTVVFSIIALEKLNL-----NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVM 639
GKT+ F I LE L ++GL +IL+PTRE+A QI +V++++G +H + +V+
Sbjct: 95 GKTLAFLIPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKVGRYHH-FSAGLVI 153
Query: 640 GGLSVNEDIAKFKK 681
GG S+ E+ + K
Sbjct: 154 GGKSLKEEQERLGK 167
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 79.4 bits (187), Expect = 1e-13
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Frame = +1
Query: 277 HDLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLL 456
HD V+ E TF + +++ G+ KP+ IQ+ +PL G D++
Sbjct: 7 HDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIG 66
Query: 457 EAKSGTGKTVVFSIIALEK-LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEV 633
A++G+GKT F++ L L L ++LTPTRE+A QI + + +GS G+ V
Sbjct: 67 LAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGS-SIGVQSAV 125
Query: 634 VMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
++GG+ KK HI++ +PGRL
Sbjct: 126 IVGGIDSMSQSLALAKKPHIIIATPGRL 153
>UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;
Coelomata|Rep: ATP-dependent RNA helicase DDX18 - Homo
sapiens (Human)
Length = 670
Score = 79.4 bits (187), Expect = 1e-13
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 8/140 (5%)
Frame = +1
Query: 322 ENVTFTSM--LLSEFTLAGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVF 492
E+ +F S+ L++E TL + GF + IQ + PL + G DLL AK+G+GKT+ F
Sbjct: 175 EDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLE-GRDLLAAAKTGSGKTLAF 233
Query: 493 SIIALE---KLNL--NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVN 657
I A+E KL NG V+IL+PTRE+A Q V+K++ +HH ++MGG + +
Sbjct: 234 LIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVH-TYGLIMGGSNRS 292
Query: 658 EDIAKFKKKVHIVVGSPGRL 717
+ K ++I+V +PGRL
Sbjct: 293 AEAQKLGNGINIIVATPGRL 312
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 79.4 bits (187), Expect = 1e-13
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + +S L L G+ +P+ +Q +P DL++++++G+GKT F I E
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 514 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
N + N Q +ILTPTRE+A Q+ + I IG K + V G S ++ A+ K+K H
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIG-RFKRIKATAVFGKSSFDKQKAELKQKSH 122
Query: 691 IVVGSPGRL 717
IVVG+PGR+
Sbjct: 123 IVVGTPGRV 131
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 79.4 bits (187), Expect = 1e-13
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Frame = +1
Query: 322 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 501
E F+ + +S T GL SS F P+PIQ +P D+L AK+G+GKT+ F I
Sbjct: 58 EITLFSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIP 117
Query: 502 ALEKLNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDI 666
LE+L L +GL ++++PTRE+A Q ++ IG +H + +V+GG + E+
Sbjct: 118 LLERLYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYH-NFSAGLVIGGKPLKEEQ 176
Query: 667 AKFKKKVHIVVGSPGRL 717
+ +++I++ +PGRL
Sbjct: 177 ERL-GRMNILIATPGRL 192
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 79.4 bits (187), Expect = 1e-13
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F + LS+ L + GF++P+PIQ +PL G D++ A++G+GKT F + LE
Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162
Query: 511 KLNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
KL +++ G + +IL+P+RE+A Q V+K S L + +++GG S+ E
Sbjct: 163 KLKVHSAKVGARAVILSPSRELALQTLKVVKDF-SAGTDLRLAMLVGGDSLEEQFKMMMS 221
Query: 682 KVHIVVGSPGR 714
I++ +PGR
Sbjct: 222 NPDIIIATPGR 232
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/130 (30%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F SM L++ TL G++ G++ P+PIQ +P G D++ A++G+GKT + + + +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 514 LNLNN--GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
L ++ G++ +I+ PTRE+A Q V ++G L +++GG +++
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGK-LTNLKASLIIGGSKLSDQFDNLSSGP 133
Query: 688 HIVVGSPGRL 717
I+V +PGRL
Sbjct: 134 DIIVATPGRL 143
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Frame = +1
Query: 322 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 501
E++TF + L+ L L S G++ P+PIQ + G D+L A++GTGKT FS+
Sbjct: 3 ESLTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLP 62
Query: 502 ALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
L +++ N Q ++L PTRE+A Q+ + + +V + GG + + K
Sbjct: 63 LLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALK 122
Query: 679 KKVHIVVGSPGRL 717
+ ++VG+PGR+
Sbjct: 123 QNPQVIVGTPGRV 135
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 79.0 bits (186), Expect = 1e-13
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLH--GVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
F M L L G+ S GF+ PS IQ G ++ +A+SGTGKT FSI L
Sbjct: 93 FDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSIGVL 152
Query: 508 EKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLS-VNEDIAKFKK 681
K++++ Q ++L PTRE+A QI +V K+IGS GL++ + +GG V + A+
Sbjct: 153 SKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQARAAS 212
Query: 682 KVHIVVGSPGR 714
HI + +PGR
Sbjct: 213 HPHICICTPGR 223
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 79.0 bits (186), Expect = 1e-13
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
N FTS+ EF G KP+ +Q V G + ++ +++GTGKT F++
Sbjct: 2 NNPFTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAFALPI 61
Query: 505 LEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEV--VMGGLSVNEDIAKF 675
+ L+ + G+ ++++PTRE+A QIC K G +G+N ++ ++GGL++ + +
Sbjct: 62 ISTLSKDPYGIYALVISPTRELAQQICQQFKIFG---RGMNADICPIIGGLAITDQASAL 118
Query: 676 KKKVHIVVGSPGRL 717
+K HIVV +PGR+
Sbjct: 119 EKNPHIVVATPGRI 132
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IA 504
+ F L E L SG++ P+PIQ+ +P+G G D+L A +G+GKT F + +
Sbjct: 203 IDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262
Query: 505 LEKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
+ L + +ILTPTRE+A QI K++ S + +++GGL + + + ++
Sbjct: 263 MRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQH 322
Query: 685 VHIVVGSPGRL 717
V +++ +PGRL
Sbjct: 323 VKVIIATPGRL 333
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 79.0 bits (186), Expect = 1e-13
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F SM L++ L + GF+ P+PIQ +PL G D++ A++G+GKT F I +E
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 514 LN---LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
L N+ + +IL+P RE+A Q V+K S L ++GG+S+ E + K
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDF-SKGTDLRSVAIVGGVSLEEQFSLLSGK 189
Query: 685 VHIVVGSPGR 714
IVV +PGR
Sbjct: 190 PDIVVATPGR 199
>UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15032, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 574
Score = 78.6 bits (185), Expect = 2e-13
Identities = 53/140 (37%), Positives = 83/140 (59%), Gaps = 8/140 (5%)
Frame = +1
Query: 322 ENVTFTSM--LLSEFTLAGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVF 492
E+ +F S+ L+SE TL G+ GF+ + IQ + PL + G D+L AK+G+GKT+ F
Sbjct: 57 EDTSFASLAELVSENTLKGVKELGFEHMTEIQHKTIRPLLE-GRDVLAAAKTGSGKTLAF 115
Query: 493 SIIALE-----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVN 657
I +E K NG V+IL+PTRE+A Q V+K++ +HH ++MGG + +
Sbjct: 116 LIPCIELIYKLKFMPRNGTGVIILSPTRELAMQTYGVMKELMTHHVH-TYGLIMGGSNRS 174
Query: 658 EDIAKFKKKVHIVVGSPGRL 717
+ K ++I+V +PGRL
Sbjct: 175 AEAQKLANGINILVATPGRL 194
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 78.6 bits (185), Expect = 2e-13
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F + L+ + + L + G+Q P PIQ +PL G DLL A +G+GKT F + L+
Sbjct: 7 SFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLLQ 66
Query: 511 KLNLNNG-LQVMILTPTREIAAQICDVIKQ-IGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
+++ +Q +I+ PTRE+A QI V I S +N+ V+ GG + KK
Sbjct: 67 NIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQFNDLKKN 126
Query: 685 VHIVVGSPGRL 717
HI++G+PGRL
Sbjct: 127 PHIIIGTPGRL 137
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 78.6 bits (185), Expect = 2e-13
Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F M L L + F P+P+Q +PL G D+L A++GTGKT+ F+I +
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 511 K-LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
K L N +++ PTRE+A Q+ + I ++ + L + +++GG + + + +++
Sbjct: 63 KLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQRRP 122
Query: 688 HIVVGSPGRLKTSYCRKS 741
IV+G+PGR+ RK+
Sbjct: 123 RIVIGTPGRIIDHIERKT 140
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 78.6 bits (185), Expect = 2e-13
Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F S+ LS+F + L S G+++P+ IQ +P G DL+ A++G+GKT F + L
Sbjct: 1 MSFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLL 60
Query: 508 EKLNL-----NNGLQVMILTPTREIAAQICDVIKQIGSH-HKGLNVEVVMGGLSVNEDIA 669
EKL+ NN ++L PTRE+A Q+ + + + + + + GG ++N +
Sbjct: 61 EKLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQ 120
Query: 670 KFKKKVHIVVGSPGRL 717
K IVV +PGRL
Sbjct: 121 SLSKGCDIVVATPGRL 136
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F+ + LS + L + F +P+PIQ + G D++ A++GTGKT+ F + ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 514 LNL---NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
L+ G++ +ILTPTRE+A QI + + QI + G+ V +GGL+ + +
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQI-ARGTGIRAAVAVGGLNERSQLRDIRGG 122
Query: 685 VHIVVGSPGRL 717
+IVV +PGRL
Sbjct: 123 ANIVVATPGRL 133
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 78.6 bits (185), Expect = 2e-13
Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + LS +AGL + P+PIQ +P G G D+L A++GTGKT F + L+
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 514 LNLNNGLQV-------MILTPTREIAAQICDVIKQI--GSHHKGLNVEVVMGGLSVNEDI 666
L + G + +IL PTRE+ +QIC+ ++ GSH L ++V++GG+++ I
Sbjct: 133 L-MKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSH---LKLQVIVGGVAIGPQI 188
Query: 667 AKFKKKVHIVVGSPGRLKTSYCRKS 741
+ ++ ++V +PGRL RK+
Sbjct: 189 KRAERGADLIVATPGRLIDLLDRKA 213
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F SM L++ L ++ GF P+PIQ +P+ G D++ A++G+GKT F I ++K
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQK 291
Query: 514 LNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
L ++ G++ +IL+PTRE+A Q V+K S L +++GG S+ + +
Sbjct: 292 LGDHSTTVGVRAVILSPTRELAIQTFKVVKDF-SQGTQLRTILIVGGDSMEDQFTDLARN 350
Query: 685 VHIVVGSPGRL 717
I++ +PGRL
Sbjct: 351 PDIIIATPGRL 361
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 78.6 bits (185), Expect = 2e-13
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF S+ L A + + G++ P+ IQ +P G D++ A++G+GKT F + L+
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 511 KL-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+L +IL PTRE+ QI I +G G+ V ++GGL N KK
Sbjct: 112 RLLQRTQRFYALILAPTRELCLQISQQILAMGGT-LGVTVVTLVGGLDHNTQAIALAKKP 170
Query: 688 HIVVGSPGRL 717
H+VVGSPGR+
Sbjct: 171 HVVVGSPGRV 180
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 78.6 bits (185), Expect = 2e-13
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 510
F+ L + L+ L ++KP PIQ+ +P CG D+L A++G+GKT+ + + A+
Sbjct: 390 FSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYLLPAIRH 449
Query: 511 -----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
KL N G+ V+I+ PTRE+A+QI V G+ + V GG + E +
Sbjct: 450 VLYQPKLRENEGMIVLIIAPTRELASQI-GVESSKLCKLVGIRTKAVYGGSPIGEQLNAL 508
Query: 676 KKKVHIVVGSPGRL 717
K+ V IV G+PGRL
Sbjct: 509 KRGVEIVCGTPGRL 522
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 78.6 bits (185), Expect = 2e-13
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 510
F + LS+ TL + GF + +Q +P G D+L AK+G+GKT+ F I A+E
Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 103
Query: 511 ----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
K NG ++++TPTRE+A QI V +++ H +V+GG + ++ K
Sbjct: 104 LHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFH-SQTFGIVIGGANRRQEAEKLM 162
Query: 679 KKVHIVVGSPGRL 717
K V++++ +PGRL
Sbjct: 163 KGVNMLIATPGRL 175
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + LS + + G ++P+P+QL +P G D L AK+G+GKT F + L+K
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 514 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
L+ + G+ ++LTPTRE+A QI + + +G GL +++GG+ + + +K H
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGK-PLGLKDCIIVGGMDMVAQALELSRKPH 122
Query: 691 IVVGSPGRL 717
+V+ +PGRL
Sbjct: 123 VVIATPGRL 131
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 78.2 bits (184), Expect = 3e-13
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF +M LS L + S F P+PIQ +P+ G D+ A +GTGKT + + LE
Sbjct: 155 TFYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLE 214
Query: 511 KL---NLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
+L L+ + +V++L PTRE+ Q+ V KQ+ S + V + +GGL V + +
Sbjct: 215 RLLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQL-SQFTSVEVGLSVGGLDVKVQESVLR 273
Query: 679 KKVHIVVGSPGRL 717
K IV+ +PGRL
Sbjct: 274 KNPDIVIATPGRL 286
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 78.2 bits (184), Expect = 3e-13
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 9/140 (6%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
+VTF + LS L + G+ P+PIQ +P G D++ A++GTGKT F++
Sbjct: 4 DVTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPL 63
Query: 505 LEKLN---------LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVN 657
L +L + ++ +I+ PTRE+A QI + +++ G + L VV GG+++
Sbjct: 64 LYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGK-YLALRTAVVFGGINIE 122
Query: 658 EDIAKFKKKVHIVVGSPGRL 717
IA + V I+V +PGRL
Sbjct: 123 PQIAALQAGVEILVATPGRL 142
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 78.2 bits (184), Expect = 3e-13
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIA 504
+TF + L+ L + GF+ PS IQ +P L D++ A++GTGKT F
Sbjct: 1 MTFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPL 60
Query: 505 LEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
L+ ++ ++ Q +I+ PTRE+ QI + +K H KG+ V V GG ++ E + +
Sbjct: 61 LQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISR 120
Query: 682 KVHIVVGSPGRLKTSYCRK 738
IVV +PGR++ R+
Sbjct: 121 GAQIVVATPGRMQDMMRRR 139
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 78.2 bits (184), Expect = 3e-13
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Frame = +1
Query: 310 VQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 489
V+ E TF + +++ G+ KP+ IQ+ +PL G D++ A++G+GKT
Sbjct: 7 VEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 66
Query: 490 FSIIALEK-LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDI 666
F++ L L L ++LTPTRE+A QI + + +GS G+ V++GG+
Sbjct: 67 FALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGS-SIGVQSAVIVGGIDSMSQS 125
Query: 667 AKFKKKVHIVVGSPGRL 717
KK HI++ +PGRL
Sbjct: 126 LALAKKPHIIIATPGRL 142
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 78.2 bits (184), Expect = 3e-13
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F S+ L + G++ P+PIQ +PL G D++ A++G+GKT F I LEK
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 514 LNLN---NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
L + G++ +IL+PTR++A Q K++G L V +++GG S+ + + K
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGK-FTDLRVSLLVGGDSMEDQFEELTKG 148
Query: 685 VHIVVGSPGRL 717
+++ +PGRL
Sbjct: 149 PDVIIATPGRL 159
>UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX55
homolog; n=7; Endopterygota|Rep: Probable ATP-dependent
RNA helicase DDX55 homolog - Drosophila melanogaster
(Fruit fly)
Length = 613
Score = 78.2 bits (184), Expect = 3e-13
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 11/141 (7%)
Frame = +1
Query: 349 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 528
LS+ L + S GFQ+ +P+Q +PL D+ EA +G+GKT+ F + LE L +
Sbjct: 14 LSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRH 73
Query: 529 --------GLQVMILTPTREIAAQICDVIKQIGSHH--KGLNVEVVMGGLSVNEDIAKFK 678
+ ++++PTRE+A QI +V+ Q H + LN ++++GG S+ EDIA +
Sbjct: 74 KETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLR 133
Query: 679 KKVH-IVVGSPGRLKTSYCRK 738
++ I+V +PGRL+ + RK
Sbjct: 134 RETPCILVCTPGRLEDLFQRK 154
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 77.8 bits (183), Expect = 3e-13
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Frame = +1
Query: 295 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 474
T +++ E+ TF + L E +A L G P IQ +P G G D+L A++G+
Sbjct: 136 TAAEQIEVAES-TFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRARTGS 194
Query: 475 GKTVVFSIIALEKL------NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVV 636
GKT+ F + L +L + + ++L PTRE+A Q+ D ++ +G L + VV
Sbjct: 195 GKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGD-SLDLRLSVV 253
Query: 637 MGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+GG+ IA ++ + +++ +PGRL
Sbjct: 254 VGGVPYGRQIAALQRGIDVLIATPGRL 280
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 77.8 bits (183), Expect = 3e-13
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Frame = +1
Query: 343 MLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 522
M LSE L + + P+PIQ +P G DL+ A++GTGKT F++ L +L+L
Sbjct: 1 MQLSEAIQEALATEKYHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDL 60
Query: 523 NNGL------QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
+ QV++L+PTRE+A QI G + K + + GG+ N + K+
Sbjct: 61 DRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRNVK-FRLTTIFGGVGQNPQVRALKRG 119
Query: 685 VHIVVGSPGRL 717
VH+ + +PGRL
Sbjct: 120 VHVAIATPGRL 130
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 77.8 bits (183), Expect = 3e-13
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Frame = +1
Query: 286 RNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 465
R++ T D V F+S+ L + L GL GFQ+ +P+Q +P D++ AK
Sbjct: 7 RDTRITTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAK 66
Query: 466 SGTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVV-- 636
+GTGKT F I L+ +N + +Q ++L TRE+A Q V K + + + ++
Sbjct: 67 NGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCA 126
Query: 637 MGGLSVNEDIAKFKKKVHIVVGSPGRLK 720
+GG+S+ ED + ++K +V+ +PGRL+
Sbjct: 127 IGGVSIAEDRERAREKPLVVLATPGRLQ 154
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 77.4 bits (182), Expect = 5e-13
Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F L + L + +GF++PS +Q +P G D+L +AK+GTGKT VF + L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 511 KL-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK-KK 684
+L + ++L TRE+A QI + K++G V+ V GG+ + DI K KK
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGK-FTNFKVKAVYGGVEESVDIHTLKTKK 157
Query: 685 VHIVVGSPGR 714
HI+V +PGR
Sbjct: 158 PHILVATPGR 167
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 77.4 bits (182), Expect = 5e-13
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF + L E + L +G P PIQ +P G D+L ++G+GKT+ F + L
Sbjct: 62 TFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLA 121
Query: 511 KL----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
L + + +ILTPTRE+A Q+ D ++ G GL ++VV GG S+ I +
Sbjct: 122 TLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGD-VLGLKMKVVCGGTSMGNQIYALE 180
Query: 679 KKVHIVVGSPGRLK 720
+ V ++V +PGRL+
Sbjct: 181 RGVDVLVATPGRLR 194
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 77.4 bits (182), Expect = 5e-13
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
FT + L L +G++ P+PIQL +P+ G DLL A++GTGKT FS+ L+
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 514 LNLN------NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
L+ + + +ILTPTRE+A QI + I+ S H + V+ GG+ N +
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAY-SKHLNMKHAVIFGGVGQNPQVRAL 124
Query: 676 KKKVHIVVGSPGRLKTSYCRK 738
+ V I++ +PGRL + +K
Sbjct: 125 QGGVDILIATPGRLMDLHGQK 145
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 77.4 bits (182), Expect = 5e-13
Identities = 39/142 (27%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
+ +F+S+ L L+ L G+ + +P+Q +P G D+ +AK+G+GKT F I
Sbjct: 1 MSTTSFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGI 60
Query: 499 IALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
L+++ +++ Q ++L PTRE+A Q+ ++++ + + + + GG + + +
Sbjct: 61 GLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSL 120
Query: 676 KKKVHIVVGSPGRLKTSYCRKS 741
HIVVG+PGR++ ++S
Sbjct: 121 VHAPHIVVGTPGRIQDHLRKQS 142
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 77.4 bits (182), Expect = 5e-13
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = +1
Query: 322 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 501
+NV F + L + L+ + ++G++KP+PIQ + + G D L+ AK+GTGKT F+I
Sbjct: 3 KNVQFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIP 62
Query: 502 ALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
AL+ L QV+ILTP RE+ QI ++G + V V GG ++ + K
Sbjct: 63 ALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKLS-GVKKSL 121
Query: 679 KKVHIVVGSPGRL 717
++ +PGRL
Sbjct: 122 HGAQVISATPGRL 134
>UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 546
Score = 77.4 bits (182), Expect = 5e-13
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Frame = +1
Query: 340 SMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN 519
S +LSE T+ L GF +P+Q P D+ +EA +G+GKT+ + + ++E +
Sbjct: 14 SEVLSEETINVLTKIGFPSMTPVQKSVTPYLLGHKDVAVEAVTGSGKTLAYLVPSMEYIK 73
Query: 520 LN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK-KVHI 693
+ +GL V++L PTRE+A Q+ +V + I + + + V+GG V DI F K I
Sbjct: 74 KSTDGLAVLVLVPTRELAQQVYEVAQSISAEFPAMVPQYVIGGSQVTADIETFNNVKPTI 133
Query: 694 VVGSPGRL 717
++G+PG+L
Sbjct: 134 LIGTPGKL 141
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 77.4 bits (182), Expect = 5e-13
Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
+VTF S+ LS + L S +KP+ IQ V G D + AK+G+GKT+ F++
Sbjct: 151 DVTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPI 210
Query: 505 LEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
+E++ + G+ ++LTPTRE+A Q+ + IG GL ++GG+ + + + +
Sbjct: 211 VERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGK-PLGLTTATIVGGMDMMKQAQELEA 269
Query: 682 KVHIVVGSPGRL 717
+ HI+V +PGRL
Sbjct: 270 RPHIIVATPGRL 281
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 77.4 bits (182), Expect = 5e-13
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 14/143 (9%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI---- 498
+F M + L GL + G + P+PIQ+ G+P G DL+ A +G+GKT+VF +
Sbjct: 178 SFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIM 237
Query: 499 IALEK-----LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE-----VVMGGL 648
ALE+ N G +I+ P+RE+A Q ++I+ H + + + MGGL
Sbjct: 238 FALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGL 297
Query: 649 SVNEDIAKFKKKVHIVVGSPGRL 717
V+E + + VHIVV +PGRL
Sbjct: 298 PVSEALDVISRGVHIVVATPGRL 320
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 77.0 bits (181), Expect = 6e-13
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + E L L + G +P+ IQ +P G +L++ +++GTGKT+ + + L K
Sbjct: 4 FQQWPIGEPFLEALTNQGITEPTEIQQQVIPEALDGQNLIVHSQTGTGKTLAYLLPMLTK 63
Query: 514 L-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF-KKKV 687
L Q +IL PT+E+A QI +V KQ+ + + V ++GG ++ + K KKK
Sbjct: 64 TEELPEQTQALILAPTQELAMQIVEVAKQL-TATTSITVLPLIGGANIKRQVEKLKKKKP 122
Query: 688 HIVVGSPGRL 717
H+ VG+PGR+
Sbjct: 123 HVAVGTPGRI 132
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 77.0 bits (181), Expect = 6e-13
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F + L++ + GL G KP+ IQ+ +PL D++ ++ +G+GKT+ + + +
Sbjct: 4 SFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLPIFQ 63
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHK-GLNVEVVMGGLSVNEDIAKFKKK 684
K++ + +Q +IL PT E+A QI I+ + + K + ++G +V I K K+K
Sbjct: 64 KIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKLKEK 123
Query: 685 VHIVVGSPGRL 717
H++VGS GR+
Sbjct: 124 PHVIVGSSGRI 134
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 77.0 bits (181), Expect = 6e-13
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 9/140 (6%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
+ TF L+ L + G+ P+PIQ +P+ G D++ A++GTGKT FS+
Sbjct: 10 DATFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPI 69
Query: 505 LEKL---------NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVN 657
+++L + ++ +ILTPTRE+A Q+ + + H L VV GG+ +N
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAY-AKHTPLRSAVVFGGVDMN 128
Query: 658 EDIAKFKKKVHIVVGSPGRL 717
+A+ ++ V I++ +PGRL
Sbjct: 129 PQMAELRRGVEILIATPGRL 148
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 77.0 bits (181), Expect = 6e-13
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = +1
Query: 388 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTRE 564
F PSPIQ +PL G D + A++GTGKT F++ L+ L+ + Q +IL PTRE
Sbjct: 26 FITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRE 85
Query: 565 IAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+A Q+ + + + + + + + V+ GG + + + +VVG+PGR+
Sbjct: 86 LAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSGAQVVVGTPGRI 136
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 77.0 bits (181), Expect = 6e-13
Identities = 46/138 (33%), Positives = 80/138 (57%), Gaps = 8/138 (5%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F S+ L + L L +Q P+P+Q +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLL 60
Query: 508 EKL------NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE--VVMGGLSVNED 663
++L +N +V++L PTRE+A Q V++ ++ KGL++ GG+S+N
Sbjct: 61 QRLVQHGPAVSSNRARVLVLVPTRELAEQ---VLQSFIAYGKGLDLRFLAAYGGVSINPQ 117
Query: 664 IAKFKKKVHIVVGSPGRL 717
+ K +K V ++V +PGRL
Sbjct: 118 MMKLRKGVDVLVATPGRL 135
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 77.0 bits (181), Expect = 6e-13
Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 23/151 (15%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F L L + SGF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 514 L-----------------NLNNG----LQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 630
L N NNG ++ + L TRE+A QI + + + K + E
Sbjct: 117 LDTNENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCE 176
Query: 631 VVMGGLSVNEDIAKFKKK--VHIVVGSPGRL 717
VV GG+S+N+ I FK+ HI++G+PGR+
Sbjct: 177 VVYGGISMNKHIKLFKEDNIPHIIIGTPGRI 207
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 77.0 bits (181), Expect = 6e-13
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 8/139 (5%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
N+ F+S+ L L GL +GF +PIQ +P+ G D+ +A++GTGKT+ F ++
Sbjct: 8 NLNFSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVV 67
Query: 505 LEKLNLNNGL--------QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNE 660
+ +L GL + +IL PTRE+A QI + + G + GL ++ GG+ ++
Sbjct: 68 VNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGG-NLGLRFALIYGGVDYDK 126
Query: 661 DIAKFKKKVHIVVGSPGRL 717
+K +V+ +PGRL
Sbjct: 127 QREMLRKGADVVIATPGRL 145
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 76.6 bits (180), Expect = 8e-13
Identities = 42/134 (31%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F + LS+ L + G+++P+P+Q +P DL+ A++GTGKT F + +
Sbjct: 1 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 60
Query: 508 EKLNLNNGL----QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
+ L + +IL PTRE+AAQ+ + ++ G +HK L++ +++GG+ + E A
Sbjct: 61 DILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHK-LSMSLLIGGVPMAEQQAAL 119
Query: 676 KKKVHIVVGSPGRL 717
+K V +++ +PGRL
Sbjct: 120 EKGVDVLIATPGRL 133
>UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=1;
Pediococcus pentosaceus ATCC 25745|Rep: Superfamily II
DNA and RNA helicase - Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w)
Length = 438
Score = 76.6 bits (180), Expect = 8e-13
Identities = 41/113 (36%), Positives = 69/113 (61%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 564
GF +P+ IQ + G +L + +G+GKT+ F++ +EK+ +G Q+++L+P++E
Sbjct: 13 GFAEPTLIQQKVAEPLRNGESVLGLSPTGSGKTLAFALPLMEKITPGDGTQLLVLSPSQE 72
Query: 565 IAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKT 723
+A Q DV ++ + GL V + GG +V I + KKK IVVG+PGR+ T
Sbjct: 73 LAIQTTDVFREWAA-LIGLRVTSITGGANVQRQIERLKKKPEIVVGTPGRVLT 124
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 76.6 bits (180), Expect = 8e-13
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
NVTF L + + G+ +P+PIQ +P+ G D++ A++GTGKT FS+
Sbjct: 19 NVTFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPI 78
Query: 505 LEKL---------NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVN 657
L +L + ++ +ILTPTRE+A Q+ + + L VV GG+ +N
Sbjct: 79 LNRLMPLATENTSPARHPVRALILTPTRELADQVAANVHTY-AKFTPLRSTVVYGGVDIN 137
Query: 658 EDIAKFKKKVHIVVGSPGRLKTSYCRKS 741
I ++ V +V+ +PGRL +KS
Sbjct: 138 PQIQTLRRGVELVIATPGRLLDHVQQKS 165
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 76.6 bits (180), Expect = 8e-13
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
R+RD V FT++ L+E L + ++ P+PIQ +P+ G DL+ A++GTG
Sbjct: 48 RSRDESAVLT-DFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTG 106
Query: 478 KTVVFSIIALEKLNLN------NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVM 639
KT F + L ++ N + ++L PTRE+A QI D + G + +V VV+
Sbjct: 107 KTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRP-SVAVVI 165
Query: 640 GGLSVNEDIAKFKKKVHIVVGSPGRL 717
GG + + V ++V +PGRL
Sbjct: 166 GGAKPGPQARRMESGVDLLVATPGRL 191
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 76.6 bits (180), Expect = 8e-13
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL--------EKLNLNNGLQV 540
GF++PSPIQ + P G D + A +G+GKT+ F + AL EK +V
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRV 170
Query: 541 MILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLK 720
++L+PTRE+A QI DV+ + G+ G++ + GG S I+ K V IV+G+PGR+K
Sbjct: 171 LVLSPTRELAQQIADVLCEAGA-PCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMK 229
Score = 34.7 bits (76), Expect = 3.2
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +1
Query: 562 EIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLK 720
+++ I DV+ + G+ G++ + GG S I+ K V IV+G+PGR+K
Sbjct: 241 DVSFVIADVLCEAGAPC-GISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMK 292
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 76.6 bits (180), Expect = 8e-13
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
DLR +T DV + F L L G+ G++KPSPIQ +P+ G D+L
Sbjct: 82 DLR--IKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILAR 139
Query: 460 AKSGTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIAAQICDV 588
AK+GTGK+ + I LE+L+L + +Q M++ PTRE+A Q+ +
Sbjct: 140 AKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 76.2 bits (179), Expect = 1e-12
Identities = 38/115 (33%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQVMILT 552
G++KP+ IQ + +P+ D++ A++G+GKT F + ++ L N G +I+
Sbjct: 28 GYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQHLLNVKEKNRGFYCIIIE 87
Query: 553 PTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
PTRE+AAQ+ +VI ++G GL +++GG+ V + + K+ ++VG+PGR+
Sbjct: 88 PTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQSVQLAKRPQVIVGTPGRI 142
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 76.2 bits (179), Expect = 1e-12
Identities = 36/123 (29%), Positives = 71/123 (57%)
Frame = +1
Query: 349 LSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 528
LSE + L + +P+ IQ +P+ G D+L +++G+GKT+ + + ++ + N
Sbjct: 10 LSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSF-IKN 68
Query: 529 GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSP 708
+IL PTRE+A QI + ++ + +K +N V++GG + + + KK +++G+P
Sbjct: 69 KTTALILVPTRELATQIHSTLNKVTTSYK-INSAVLIGGEPMPKQFIQLKKNPKVIIGTP 127
Query: 709 GRL 717
GR+
Sbjct: 128 GRI 130
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 76.2 bits (179), Expect = 1e-12
Identities = 46/141 (32%), Positives = 80/141 (56%), Gaps = 11/141 (7%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F S+ LSE + + ++G+ +P+P+Q +P G DL++ A++GTGKT F++ L
Sbjct: 1 MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
Query: 508 EKL--------NLNNG---LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
E+L + +G +V++LTPTRE+AAQ+ D K + + + GG+ +
Sbjct: 61 ERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFK-VYARDLNFISACIFGGVGM 119
Query: 655 NEDIAKFKKKVHIVVGSPGRL 717
N + K V ++V PGRL
Sbjct: 120 NPQVQAMAKGVDVLVACPGRL 140
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 76.2 bits (179), Expect = 1e-12
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F S AG+ G+ P+PIQ +P G D++ A++GTGKT F + L
Sbjct: 1 MSFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPIL 60
Query: 508 EKL--NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
++L ++ MI+TPTRE+A QI VI+ +G + GL + GG+ I + ++
Sbjct: 61 QRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGK-YTGLRSVTLYGGVGYQGQIQRLRR 119
Query: 682 KVHIVVGSPGRL 717
V I V PGRL
Sbjct: 120 GVEIAVVCPGRL 131
>UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 76.2 bits (179), Expect = 1e-12
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 8/136 (5%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + LS+ T+ GL S + + IQ +P CG D+L AK+G+GKT+ F I LEK
Sbjct: 72 FDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTLAFLIPVLEK 131
Query: 514 L-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
L +G+ +I++PTRE+ Q+ DV+K +G +H + +++GG +D+ K
Sbjct: 132 LYRLRWGPEDGVGSIIISPTRELTGQLFDVLKSVGKYH-SFSAGLLIGG---RKDVGMEK 187
Query: 679 KKV---HIVVGSPGRL 717
+ V +I+V +PGRL
Sbjct: 188 EHVNELNILVCTPGRL 203
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 76.2 bits (179), Expect = 1e-12
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF+ + L E L L GF +P+ IQ +P G D+L A +GTGKT + + AL+
Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64
Query: 511 KL-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKF 675
L + +++ILTPTRE+A Q+ D +++ + H L++ + GG++ F
Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHAREL-AKHTHLDIATITGGVAYMNHAEVF 123
Query: 676 KKKVHIVVGSPGRL 717
+ IVV + GRL
Sbjct: 124 SENQDIVVATTGRL 137
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 76.2 bits (179), Expect = 1e-12
Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Frame = +1
Query: 388 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL-----EKLNLNNGLQ----- 537
F+KPSPIQ H P G DL+ AK+G+GKT+ F I A+ + + G +
Sbjct: 134 FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPT 193
Query: 538 VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
++L+PTRE+A QI DV+++ G GL V GG S I+ + V IV+G+PGRL
Sbjct: 194 CLVLSPTRELAVQISDVLREAG-EPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRL 252
Query: 718 K 720
+
Sbjct: 253 R 253
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 76.2 bits (179), Expect = 1e-12
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Frame = +1
Query: 271 LAHDLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDL 450
+A +S++++ E+ +F + LS L L S F KP+PIQ +P+ G D+
Sbjct: 315 IATSADSSSKSKSTNDAES-SFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDI 373
Query: 451 LLEAKSGTGKTVVFSIIALEKLNLNNGL--------QVMILTPTREIAAQICDVIKQIGS 606
+ A +G+GKT F I +E+L +V+IL PTRE+A Q V K I +
Sbjct: 374 VAGAVTGSGKTAAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSI-A 432
Query: 607 HHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+ + +GGLSV A+ K + +V+ +PGRL
Sbjct: 433 KFTDIRFCLCVGGLSVKSQEAELKLRPEVVIATPGRL 469
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 75.8 bits (178), Expect = 1e-12
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Frame = +1
Query: 382 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IALEKLNLNNGLQ----VMI 546
+G++ P+P+Q+ VP+G G D++ A +G+GKTV F + + + L + +I
Sbjct: 188 AGYEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRALQSESASPSCPACLI 247
Query: 547 LTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
LTPTRE+A QI + K++ + +++GG+ + + + K + IV+G+PGRL
Sbjct: 248 LTPTRELAIQIEEQAKELMRGLPNMGTALLVGGMPLPPQLHRLKHNIKIVIGTPGRL 304
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 75.8 bits (178), Expect = 1e-12
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Frame = +1
Query: 322 ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 501
++ F+ + L++ + G+ +P+PIQ VP G D+ A++GTGKT F++
Sbjct: 131 QDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALP 190
Query: 502 ALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
L KL + L+ ++L PTRE+A Q+ + ++ S + L VV GG+ + +
Sbjct: 191 ILHKLGAHERRLRCLVLEPTRELALQVEEAFQKY-SKYTDLTATVVYGGVGYGKQREDLQ 249
Query: 679 KKVHIVVGSPGRL 717
+ V +V +PGRL
Sbjct: 250 RGVDVVAATPGRL 262
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 75.8 bits (178), Expect = 1e-12
Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 9/158 (5%)
Frame = +1
Query: 271 LAHDLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDL 450
++ D+R+ +T I+ N F+S+ L ++ L + G++ P+PIQ +P G DL
Sbjct: 14 VSDDIRSERKTT---IMSN-PFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDL 69
Query: 451 LLEAKSGTGKTVVFSIIALEKLN---------LNNGLQVMILTPTREIAAQICDVIKQIG 603
L A++GTGKT F + +LE+L + +++++LTPTRE+A QI D Q
Sbjct: 70 LAAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQI-DQNVQSY 128
Query: 604 SHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+ L V+ GG+++++ A + IVV + GRL
Sbjct: 129 IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRL 166
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 75.8 bits (178), Expect = 1e-12
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Frame = +1
Query: 310 VQIVENVT-FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 486
V+ E +T F M LS + + G+ P+PIQ +P+ G D+ A +GTGKT
Sbjct: 150 VEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTA 209
Query: 487 VFSIIALEKL---NLNNG--LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLS 651
+ + LE+L LNN +V++L PTRE+ AQ+ V KQ+ ++V + +GGL
Sbjct: 210 AYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQL-CQFTTIDVGLAIGGLD 268
Query: 652 VNEDIAKFKKKVHIVVGSPGRL 717
V A ++ IV+ +PGRL
Sbjct: 269 VKAQEAVLRQNPDIVIATPGRL 290
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 75.4 bits (177), Expect = 2e-12
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 5/148 (3%)
Frame = +1
Query: 289 NSTRTRDV-QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 465
NS + D Q E++TF M LS L + + F +P+PIQ +P+G G D+ A
Sbjct: 167 NSGFSEDASQYDESLTFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAA 226
Query: 466 SGTGKTVVFSIIALEKLNLNNG----LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEV 633
+GTGKT F + LE+L +V++L PTRE+ Q+ V +Q+ + + +
Sbjct: 227 TGTGKTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTE-VTTCL 285
Query: 634 VMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+GGL V A + +++ +PGRL
Sbjct: 286 AVGGLDVKTQEAALRSGPDVLIATPGRL 313
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 75.4 bits (177), Expect = 2e-12
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+TF + L T+ + SG+ P+PIQ +P G D++ A++GTGKT F + +
Sbjct: 24 LTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPII 83
Query: 508 EKLNLNN-----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAK 672
E L + + ++LTPTRE+AAQ+ + + + + L + V GG+S+ + +
Sbjct: 84 ELLRAEDKPKRYQVHSLVLTPTRELAAQV-EASAKAYTKYLALRSDAVFGGVSIRPQVKR 142
Query: 673 FKKKVHIVVGSPGRL 717
+ V I+V +PGRL
Sbjct: 143 LQGGVDILVATPGRL 157
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 75.4 bits (177), Expect = 2e-12
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F S+ L L + G+++PSPIQ +P G D+L A++GTGKT F++ L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 514 L-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVH 690
N QV++L PTRE+A Q+ ++ H + V + GG K+
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 691 IVVGSPGRL 717
VVG+PGR+
Sbjct: 128 WVVGTPGRV 136
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 75.4 bits (177), Expect = 2e-12
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F SM L + G+ G++ P+PIQ +PL G D++ AK+G+GKT F I EK
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 514 LNL---NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
L G + +IL+PTRE+A Q IK++G + L +V+GG S++ +
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFME-LKSILVLGGDSMDSQFSAIHTC 159
Query: 685 VHIVVGSPGR 714
++V +PGR
Sbjct: 160 PDVIVATPGR 169
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 75.4 bits (177), Expect = 2e-12
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
Frame = +1
Query: 388 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE------KLNLNNGLQVMIL 549
+++P PIQ+ +P CG D++ A++G+GKT+ F + A+ L N+G+ V+++
Sbjct: 388 YERPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVI 447
Query: 550 TPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
PTRE+ QI + + S GL + GG + E + K+ IV+G+PGRL
Sbjct: 448 APTRELVIQISNESSKF-SRAVGLKTLAIYGGAGIGEQLNALKRGAEIVIGTPGRL 502
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 75.4 bits (177), Expect = 2e-12
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+FT L L + S + +P+PIQ +P G D++ A++G+GKT F+I L+
Sbjct: 99 SFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQ 158
Query: 511 KL-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
L ++L PTRE+A QI + +GS GL ++GG+S+ E +K
Sbjct: 159 TLYTAAQPYYALVLAPTRELAFQIKETFDALGS-SMGLRSVCIIGGMSMMEQARDLMRKP 217
Query: 688 HIVVGSPGRL 717
H+++ +PGRL
Sbjct: 218 HVIIATPGRL 227
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 75.4 bits (177), Expect = 2e-12
Identities = 45/141 (31%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Frame = +1
Query: 310 VQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 489
+ + E F+ LS+ TL GL + ++ + IQ + L G D+L AK+G+GKT+
Sbjct: 63 INVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLA 122
Query: 490 FSIIALEKL-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
F + LE L +GL V+I++PTRE+A Q +V++++G +H + +++GG +
Sbjct: 123 FLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNH-DFSAGLIIGGKDL 181
Query: 655 NEDIAKFKKKVHIVVGSPGRL 717
+ + ++I+V +PGRL
Sbjct: 182 KHEAERI-NNINILVCTPGRL 201
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 75.4 bits (177), Expect = 2e-12
Identities = 45/141 (31%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Frame = +1
Query: 310 VQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 489
+ + E F+ LS+ TL GL + ++ + IQ + L G D+L AK+G+GKT+
Sbjct: 63 INVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLA 122
Query: 490 FSIIALEKL-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
F + LE L +GL V+I++PTRE+A Q +V++++G +H + +++GG +
Sbjct: 123 FLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNH-DFSAGLIIGGKDL 181
Query: 655 NEDIAKFKKKVHIVVGSPGRL 717
+ + ++I+V +PGRL
Sbjct: 182 KHEAERI-NNINILVCTPGRL 201
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 74.9 bits (176), Expect = 2e-12
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
+V+F ++ L + L G+ KP+PIQ +P G DL A++GTGKT F++ +
Sbjct: 5 SVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPS 64
Query: 505 LEKLNLN------NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDI 666
+ L N G +++IL+PTRE+A+QI + H ++V V GG+ + +
Sbjct: 65 IHYLATNPQARPQRGCRMLILSPTRELASQIARACNDY-TRHLRMSVNAVFGGVPIGRQM 123
Query: 667 AKFKKKVHIVVGSPGRL 717
+ I+V +PGRL
Sbjct: 124 RMLDRGTDILVATPGRL 140
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/135 (27%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F+ + L L ++++G++ +P+Q +P G DLL+ + +G+GKT F + ++
Sbjct: 1 MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSI 60
Query: 508 EKLNL-----NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAK 672
++L + G +V++LTPTRE+A Q+ G + ++GG + +
Sbjct: 61 QRLLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLKR 120
Query: 673 FKKKVHIVVGSPGRL 717
+ V +VV +PGRL
Sbjct: 121 LSQPVDVVVATPGRL 135
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 74.9 bits (176), Expect = 2e-12
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 7/161 (4%)
Frame = +1
Query: 256 IAVMSLAHDLRNSTRTRDVQIV--ENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPL 429
I + L H+L + T V E TF + + T+ L ++G + IQ + +P+
Sbjct: 84 IEMSELTHNLMDGTELAATAPVSPEAPTFAELGARQETVDALAAAGITRAFAIQEYALPI 143
Query: 430 GKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGL-QVMILTPTREIAAQICDVIK 594
G DL+ +A +GTGKT+ F + LE++ +G Q +++ PTRE+ Q+ ++
Sbjct: 144 ALRGVDLIGQAPTGTGKTLGFGVPLLEQVLAPAEGGDGTPQALVVVPTRELGIQVAKDLQ 203
Query: 595 QIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
GS +G+ V + GG++ I + V I+VG+PGRL
Sbjct: 204 AAGS-TRGVRVLPIYGGVAYEPQIEALRSGVEILVGTPGRL 243
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Frame = +1
Query: 319 VENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
+E +F + + L +G P PIQ +P+ G D++ +AK+GTGKT+ F I
Sbjct: 34 IEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLGFGI 93
Query: 499 IAL-----------EKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGG 645
AL +KL + Q +++ PTRE+A Q+ ++ + + + + GG
Sbjct: 94 PALQRVVGRDDPGFDKLAVPGAPQALVIVPTRELAVQVAKDLEN-AARKRNARIATIYGG 152
Query: 646 LSVNEDIAKFKKKVHIVVGSPGRLKTSYCRK 738
+ + +K V IVVG+PGRL Y +K
Sbjct: 153 RAYEPQVDSLQKGVEIVVGTPGRLIDLYKQK 183
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
NV+F M LS L +G+ P+PIQ +P+ G D+ A +GTGKT F +
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 505 LEKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAK 672
LE++ + +V++L PTRE+A Q+ V +++ + + L V + GGL + A
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDLKAQEAA 265
Query: 673 FKKKVHIVVGSPGRL 717
+ +VV +PGRL
Sbjct: 266 LRSGPDVVVATPGRL 280
>UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 900
Score = 74.9 bits (176), Expect = 2e-12
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
D+ S E FT + +S+ T GL + +P+Q + L G D+L
Sbjct: 53 DIAESNEANTSTEHEYSKFTELPISQRTQMGLERGHYTILTPVQKGTLHLALAGLDVLGA 112
Query: 460 AKSGTGKTVVFSIIALEKL-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLN 624
AK+G+GKT+ F I LE+L + + G+ ++L+PTRE+A QI V++ +G H L+
Sbjct: 113 AKTGSGKTLCFVIPVLERLYRERWSSDMGVGALLLSPTRELALQIFKVMQLVGYKHV-LS 171
Query: 625 VEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
++ GG V E+ K + I+VG+PGR+
Sbjct: 172 AALLTGGRDVQEE-RKRLHAISIIVGTPGRV 201
>UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent rRNA
helicase spb4 - Schizosaccharomyces pombe (Fission
yeast)
Length = 606
Score = 74.9 bits (176), Expect = 2e-12
Identities = 44/143 (30%), Positives = 86/143 (60%), Gaps = 13/143 (9%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F S+ + ++ + + GF+K +P+Q + +PL DL++EA +G+GKT+ + +
Sbjct: 1 MSFQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCF 60
Query: 508 EKLNLNN----GLQVMILTPTREIAAQICDVIKQIGSHH-------KGLNVEVVMGGL-S 651
+K+ + GL +I+ PTRE+A QI +V K++ ++ K L ++ +GG +
Sbjct: 61 DKVTRRDTDETGLGALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGT 120
Query: 652 VNEDIAKFKKK-VHIVVGSPGRL 717
+ D+A F++K +V+G+PGRL
Sbjct: 121 LTNDLASFREKNPSVVIGTPGRL 143
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 74.5 bits (175), Expect = 3e-12
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F S + + L G++K +PIQ +P+ + G D+ A++GTGKT FS+ +
Sbjct: 1 MSFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLI 60
Query: 508 EKLNLNNG-------LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDI 666
++L L +G + +I PTRE+A QI D IK + + L+V + GG ++
Sbjct: 61 QQL-LESGKSASRKTARALIFAPTRELAEQIADNIKAY-TKYTNLSVAAIFGGRKMSSQE 118
Query: 667 AKFKKKVHIVVGSPGRLK 720
+ V I+V +PGRL+
Sbjct: 119 RMLENGVDILVATPGRLE 136
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 74.5 bits (175), Expect = 3e-12
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F++ LS+ L G++ P+ +Q +P+ DL++++++G+GKT F I E
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+ N Q ++LTPTRE+A Q+ + I IG K + + G + K+K
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIG-RFKRIKAAAIYGKSPFARQKLELKQKT 123
Query: 688 HIVVGSPGRL 717
HIVVG+PGR+
Sbjct: 124 HIVVGTPGRV 133
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 74.5 bits (175), Expect = 3e-12
Identities = 43/146 (29%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
++F ++ L + + + + G+ + IQ +PL DLL A++GTGKT F++ L
Sbjct: 1 MSFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLL 60
Query: 508 EKLNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAK 672
++L G++ +I+TPTRE+AAQ+ + +I S + V GG+ + IA+
Sbjct: 61 QRLAAKQSTKVQGVRSLIVTPTRELAAQVA-ISVEIYSTQLNIRSFAVYGGVRIEPQIAQ 119
Query: 673 FKKKVHIVVGSPGRLKTSYCRKSY*F 750
++ V +++ +PGRL Y +++ F
Sbjct: 120 LQEGVDVLIATPGRLLDLYEQRALHF 145
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 74.5 bits (175), Expect = 3e-12
Identities = 41/130 (31%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + LSE L L+ G ++P+ IQ +P G +++ +A++GTGKT+ + + +EK
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEK 63
Query: 514 L-NLNNGLQVMILTPTREIAAQICDVIKQI-GSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
+ + N +Q +IL+PT E+ QI +V+ + K + ++G ++ + K K K
Sbjct: 64 IDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKNKP 123
Query: 688 HIVVGSPGRL 717
HI+VG+ GR+
Sbjct: 124 HILVGTTGRI 133
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQVMILTPT 558
GF +P+PIQ +P G D++ +++G+GKT F I L+KL + G++ ++++PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 559 REIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
RE+A Q V+K++G GL ++GG + E + + I++ +PGRL
Sbjct: 103 RELALQTFKVVKELG-RFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRL 154
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 74.5 bits (175), Expect = 3e-12
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Frame = +1
Query: 382 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-NLNNG----LQVMI 546
+GF+ PS +Q +P G D+L +AKSG GKT VF LE++ + G Q ++
Sbjct: 54 NGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQVEKVPQGQKPYCQAVV 113
Query: 547 LTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV-HIVVGSPGRLKT 723
L RE+A QI K+ + V GG+ +E++ + KK+V I+VG+PGR+K
Sbjct: 114 LVHARELAYQIEQEFKRFSKYLPYATTGVFFGGIPEDENVKQLKKEVPAIIVGTPGRMKA 173
Query: 724 SYCRKSY 744
K++
Sbjct: 174 LIQNKAF 180
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 74.5 bits (175), Expect = 3e-12
Identities = 48/143 (33%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Frame = +1
Query: 304 RDVQIVE-NVT---FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSG 471
+ +QI E N+T F+ + + + L + + +P+Q +P G D+L A++G
Sbjct: 77 KPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTG 136
Query: 472 TGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGL 648
TGKT+ F+I L+KL+++ G+ +ILTPTRE+A QI + +G L V++GG
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPIT-LKCSVIVGGR 195
Query: 649 SVNEDIAKFKKKVHIVVGSPGRL 717
S+ + ++ H+VV +PGRL
Sbjct: 196 SLIHQARELSERPHVVVATPGRL 218
>UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DBP4 - Encephalitozoon cuniculi
Length = 452
Score = 74.5 bits (175), Expect = 3e-12
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 5/133 (3%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F + + + GL +GF +Q +P+ G D++ +++GTGKT+ F + L++
Sbjct: 6 FEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQR 65
Query: 514 L-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
L +GL +++TPTRE+A QI DV+ +I + + L+ ++MGGL +++ K
Sbjct: 66 LVSLGWGGGDGLGCLVITPTRELALQIFDVLSRI-AKYTVLSTGLIMGGLEAEDELLKV- 123
Query: 679 KKVHIVVGSPGRL 717
+++I+V +PGRL
Sbjct: 124 NQMNILVCTPGRL 136
>UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
R27090_2 - Ornithorhynchus anatinus
Length = 332
Score = 74.1 bits (174), Expect = 4e-12
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTR 561
G ++P+P+Q VP G D + AK+G+GKT F + L+KL+ + G+ ++LTPTR
Sbjct: 21 GLRQPTPVQQSCVPAILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTR 80
Query: 562 EIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
E+A QI + + +G GL +V+GG+ + +K H+V+ +PGRL
Sbjct: 81 ELAYQIAEQFRVLGK-PLGLKDCIVVGGMDMVTQALDLSRKPHVVIATPGRL 131
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 74.1 bits (174), Expect = 4e-12
Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTR 561
G+ + IQ +P+ D++ ++ +GTGKTV F + L+ LN + Q +IL PT
Sbjct: 20 GYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCPTH 79
Query: 562 EIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKTSYCRKS 741
E+A+QI + +++ ++ +G+N ++ GG + I +K +I+VG+PGR+ RK+
Sbjct: 80 ELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYALRKS-NIIVGTPGRIADHINRKT 138
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Frame = +1
Query: 328 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIA 504
+TF+ + L+ L L + PS IQ +P + +++ A++GTGKT F +
Sbjct: 1 MTFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPV 60
Query: 505 LEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
L+++N + QV++L PTRE+ Q+ + + ++ E V GG + E I K +
Sbjct: 61 LQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLET 120
Query: 682 KVHIVVGSPGRLKTSYCRKS 741
HI+V +PGRL RK+
Sbjct: 121 PKHILVATPGRLLDLIARKA 140
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 74.1 bits (174), Expect = 4e-12
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 510
FT++ L + L + GF++PSPIQ +P L D++ +A++GTGKT F + ++
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
K+ Q +IL PTRE+A Q+ + IK +G+ + GG + + KK V
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEIKSF-CKGRGITTVTLYGGAPIMDQKRALKKGV 122
Query: 688 HIVVGSPGR 714
+VV +PGR
Sbjct: 123 DLVVATPGR 131
>UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 74.1 bits (174), Expect = 4e-12
Identities = 41/139 (29%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Frame = +1
Query: 316 IVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS 495
I+ + F+ + +S+ T + + + IQ +P G D++ AK+G+GKT+ F
Sbjct: 82 ILTDKLFSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFL 141
Query: 496 IIALE-----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNE 660
I A+E + + NG V++L PTRE+A Q +V K++ +H + V+GG+ +
Sbjct: 142 IPAIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYH-SQTLGYVIGGIDLRG 200
Query: 661 DIAKFKKKVHIVVGSPGRL 717
+ + K ++++V +PGRL
Sbjct: 201 EAEQLAKGINVLVATPGRL 219
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Frame = +1
Query: 355 EFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-----IALEK-L 516
+F + + GF P+ IQ G P+ G DL+ A++G+GKT+ + + IA +K L
Sbjct: 238 DFVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLPGIVHIAHQKPL 297
Query: 517 NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGL-NVEVVMGGLSVNEDIAKFKKKVHI 693
G V++L PTRE+A QI V++ G+H K L + GG + ++ V +
Sbjct: 298 QRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQVRDLERGVEV 357
Query: 694 VVGSPGRL 717
V+ +PGRL
Sbjct: 358 VIATPGRL 365
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/121 (35%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = +1
Query: 364 LAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN--LNNGLQ 537
L ++ +GFQ P+PIQ+ +P+ G +LL A +G+GKT+ FSI L +L N G +
Sbjct: 176 LQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFR 235
Query: 538 VMILTPTREIAAQICDVIKQIGSHHKGLNVEVV-MGGLSVNEDIAKFKKKVHIVVGSPGR 714
+I++PTRE+A+QI + +I S G + ++ ++ + K KK I+V +P R
Sbjct: 236 ALIISPTRELASQIHRELIKI-SEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNR 294
Query: 715 L 717
L
Sbjct: 295 L 295
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 74.1 bits (174), Expect = 4e-12
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
+ + + + +F SM LS L GL + GF+ P+ IQ +PL G D++ A +G+G
Sbjct: 249 KEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSG 308
Query: 478 KTVVFSIIALEKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGG 645
KT F + LE+L +V+IL PTRE+A Q V +I S + V + +GG
Sbjct: 309 KTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIAS-FTDIMVCLCIGG 367
Query: 646 LSVNEDIAKFKKKVHIVVGSPGR 714
LS+ + +K+ IV+ +PGR
Sbjct: 368 LSLKLQEQELRKRPDIVIATPGR 390
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/121 (35%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = +1
Query: 364 LAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN--LNNGLQ 537
L ++ +GFQ P+PIQ+ +P+ G +LL A +G+GKT+ FSI L +L N G +
Sbjct: 177 LQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFR 236
Query: 538 VMILTPTREIAAQICDVIKQIGSHHKGLNVEVV-MGGLSVNEDIAKFKKKVHIVVGSPGR 714
+I++PTRE+A+QI + +I S G + ++ ++ + K KK I+V +P R
Sbjct: 237 ALIISPTRELASQIHRELIKI-SEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNR 295
Query: 715 L 717
L
Sbjct: 296 L 296
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 73.7 bits (173), Expect = 6e-12
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F + LS + +GF PSPIQ +P G D++ +A++GTGKT FSI LE
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILE 104
Query: 511 KLNLNNGL---QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
+L+ Q +++ PTRE+A Q+ +++ + + V+ GG ++N + + +
Sbjct: 105 QLDSLEDCRDPQAIVIVPTRELADQVAAEAERL-ARGVPTEIAVLSGGKNMNRQLRQLEN 163
Query: 682 KVHIVVGSPGRL 717
+VVG+PGR+
Sbjct: 164 GTQLVVGTPGRV 175
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 73.7 bits (173), Expect = 6e-12
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
N F + + E T L F +PIQ +P G D++ +A++GTGKT F I
Sbjct: 2 NTLFEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPI 61
Query: 505 LEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
+EK+ Q +IL PTRE+ Q+ + +K++ ++ + + VV GG S + +
Sbjct: 62 IEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEA 121
Query: 682 KVHIVVGSPGR 714
K H+++ +PGR
Sbjct: 122 KPHLIIATPGR 132
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 73.7 bits (173), Expect = 6e-12
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF S+ L + L + G+++P+PIQ +P G DLL A +GTGKT FS+ L+
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 511 KL----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
++ + ++L PTRE+A Q+ + I + G G++V + GG +++ + K
Sbjct: 97 RITPGAHAPFTASALVLVPTRELAMQVAEAIHRYG-QKLGISVVPLYGGQVISQQLRVLK 155
Query: 679 KKVHIVVGSPGRLKTSYCRKS 741
+ V +VV +PGR RK+
Sbjct: 156 RGVDVVVATPGRALDHLQRKT 176
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,436,978
Number of Sequences: 1657284
Number of extensions: 14827972
Number of successful extensions: 38535
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 35847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37384
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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