Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_J09
(884 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 73 2e-15
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 25 1.0
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 24 1.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 4.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 4.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 4.2
AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory recept... 22 7.4
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 21 9.7
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 21 9.7
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 9.7
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 9.7
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 73.3 bits (172), Expect = 2e-15
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
+F + L L + SG+ KP+ IQ + +P+ G DL+ A++G+GKT F + +
Sbjct: 159 SFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIH 218
Query: 511 KL--------NLNNGLQ--VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNE 660
L NN Q V+I++PTRE+A QI D K+ +++ + V V+ GG S N
Sbjct: 219 NLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKF-AYNSTVKVAVIYGGTSTNH 277
Query: 661 DIAKFKKKVHIVVGSPGRLK 720
+ HI+V +PGRLK
Sbjct: 278 QRGRILGGCHILVATPGRLK 297
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 58 KKNRLFPKARTLNVFKEYLYNCF 126
KK + + K +TL + KE+L+N +
Sbjct: 245 KKRKPYSKFQTLELEKEFLFNAY 267
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 502 ALEKLNLNNGLQVMI 546
A EKLN+N+GLQ+ +
Sbjct: 239 AYEKLNVNDGLQLWV 253
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -1
Query: 668 AMSSFTDNPPITTSTFRPLWCDPICLITSHICAAISRVGVKII 540
A S + NP T+S +W I + ++IC A + K++
Sbjct: 114 ASSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVM 156
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -1
Query: 668 AMSSFTDNPPITTSTFRPLWCDPICLITSHICAAISRVGVKII 540
A S + NP T+S +W I + ++IC A + K++
Sbjct: 347 ASSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVM 389
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -1
Query: 668 AMSSFTDNPPITTSTFRPLWCDPICLITSHICAAISRVGVKII 540
A S + NP T+S +W I + ++IC A + K++
Sbjct: 347 ASSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVM 389
>AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory receptor
candidate 58 protein.
Length = 376
Score = 21.8 bits (44), Expect = 7.4
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -3
Query: 711 TWTANNNVYFFLKLSYVFIYR*SSHYNFDIQTLVV*SYLFNNITYLCCYFS 559
++ + N FLK+ Y + S N+D + V+ S + I+ +C S
Sbjct: 2 SYRLSRNDIRFLKVMYKLSHFLSITPNYDFENFVIISPRCDKISAICFLLS 52
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.4 bits (43), Expect = 9.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 332 VTFSTI*TSRVLVLFLKS*AKDITAIQIACCL*KVVDSILKYWMVP 195
+ FS I + VLVL +K K + I + D ++ + M+P
Sbjct: 63 MVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLAIADLLVTFLMMP 108
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.4 bits (43), Expect = 9.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 332 VTFSTI*TSRVLVLFLKS*AKDITAIQIACCL*KVVDSILKYWMVP 195
+ FS I + VLVL +K K + I + D ++ + M+P
Sbjct: 63 MVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLAIADLLVTFLMMP 108
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 552 TYTRNSSTDM*CY*TNRITPQGSEC 626
T+TR+++T T R TP S C
Sbjct: 278 THTRHTTTSHNTRGTPRTTPASSRC 302
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 153 LNRKLFQEKSQRTLGNHPIFQNRI 224
++ L QE S T NHP NR+
Sbjct: 352 MSHHLKQEPSGFTSSNHPFSINRL 375
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,363
Number of Sequences: 336
Number of extensions: 4006
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -