Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_J09
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 109 3e-24
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 109 3e-24
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 99 5e-21
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 98 6e-21
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 98 6e-21
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 95 4e-20
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 95 6e-20
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 82 4e-16
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 82 4e-16
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 82 4e-16
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 75 7e-14
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 75 9e-14
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 75 9e-14
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 75 9e-14
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 75 9e-14
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 72 5e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 72 5e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 72 5e-13
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 72 5e-13
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 70 3e-12
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 69 6e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 66 4e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 66 4e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 66 4e-11
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 64 2e-10
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 64 2e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 63 2e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 62 7e-10
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 61 1e-09
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 59 5e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 58 8e-09
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 55 6e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 55 6e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 55 6e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 53 3e-07
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z83238-7|CAB05797.1| 313|Caenorhabditis elegans Hypothetical pr... 32 0.63
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 31 1.1
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 29 3.3
Z78412-5|CAB01648.1| 484|Caenorhabditis elegans Hypothetical pr... 28 7.7
L03524-2|AAA28151.1| 488|Caenorhabditis elegans protein-tyrosin... 28 7.7
AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical ... 28 7.7
AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain p... 28 7.7
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 109 bits (261), Expect = 3e-24
Identities = 54/142 (38%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
R + + N TF S+++ + TL L +S F +PSP+Q +P+G G D+L++AKSGTG
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 478 KTVVFSIIALEKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
KT+VFS++A+E L+ + +Q +I+TPTREI+ QI + ++++ G V +GG +
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 655 NEDIAKFKK-KVHIVVGSPGRL 717
++ K+ + IV+G+PGR+
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRI 151
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 109 bits (261), Expect = 3e-24
Identities = 54/142 (38%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
R + + N TF S+++ + TL L +S F +PSP+Q +P+G G D+L++AKSGTG
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 478 KTVVFSIIALEKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
KT+VFS++A+E L+ + +Q +I+TPTREI+ QI + ++++ G V +GG +
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 655 NEDIAKFKK-KVHIVVGSPGRL 717
++ K+ + IV+G+PGR+
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRI 151
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 98.7 bits (235), Expect = 5e-21
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Frame = +1
Query: 298 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 477
+T DV + V F L L G+ G++KPSPIQ + + G D+L AK+GTG
Sbjct: 33 KTADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTG 92
Query: 478 KTVVFSIIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSV 654
KT + I +EK+ +Q M++ PTRE+A Q + ++ S H L V V GG +
Sbjct: 93 KTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVEL-SKHIQLKVMVTTGGTDL 151
Query: 655 NEDIAKFKKKVHIVVGSPGRL 717
+DI + VH+V+ +PGR+
Sbjct: 152 RDDIMRLNGTVHLVIATPGRI 172
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 98.3 bits (234), Expect = 6e-21
Identities = 52/136 (38%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Frame = +1
Query: 313 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 492
Q+VE+ F M L E L G+ GF+KPS IQ + G D++ +A+SGTGKT F
Sbjct: 26 QVVES--FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
Query: 493 SIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIA 669
S+ L++++ + +Q +++ PTRE+A QI V+ +G + +N+ +GG SV +D
Sbjct: 84 SVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALG-EYLNVNILPCIGGTSVRDDQR 142
Query: 670 KFKKKVHIVVGSPGRL 717
K + +H+VVG+PGR+
Sbjct: 143 KLEAGIHVVVGTPGRV 158
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 98.3 bits (234), Expect = 6e-21
Identities = 52/136 (38%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Frame = +1
Query: 313 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 492
Q+VE+ F M L E L G+ GF+KPS IQ + G D++ +A+SGTGKT F
Sbjct: 26 QVVES--FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
Query: 493 SIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIA 669
S+ L++++ + +Q +++ PTRE+A QI V+ +G + +N+ +GG SV +D
Sbjct: 84 SVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALG-EYLNVNILPCIGGTSVRDDQR 142
Query: 670 KFKKKVHIVVGSPGRL 717
K + +H+VVG+PGR+
Sbjct: 143 KLEAGIHVVVGTPGRV 158
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 95.5 bits (227), Expect = 4e-20
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF M L E L G+ + GF+KPS IQ VP D++ +A+SGTGKT FSI L+
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
L+ Q +IL+PTRE+A QI V+ +G + + +GG ++ EDI K
Sbjct: 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGD-YMNVQCHACIGGTNLGEDIRKLDYGQ 145
Query: 688 HIVVGSPGRL 717
H+V G+PGR+
Sbjct: 146 HVVSGTPGRV 155
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 95.1 bits (226), Expect = 6e-20
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF M L E L G+ + GF+KPS IQ +P D++ +A+SGTGKT FSI L+
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 511 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV 687
L+ Q +IL+PTRE+A QI V+ +G + + +GG ++ EDI K
Sbjct: 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGD-YMNVQCHACIGGTNLGEDIRKLDYGQ 145
Query: 688 HIVVGSPGRL 717
H+V G+PGR+
Sbjct: 146 HVVSGTPGRV 155
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 82.2 bits (194), Expect = 4e-16
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F LL L + GF+ PS +Q +P G D++ +AKSG GKT VF I L++
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 514 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV- 687
L +G + V+ + TRE+A QI ++ + G+ V V GG+++ +D +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 688 HIVVGSPGRL 717
HIVVG+PGR+
Sbjct: 163 HIVVGTPGRM 172
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 82.2 bits (194), Expect = 4e-16
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F LL L + GF+ PS +Q +P G D++ +AKSG GKT VF I L++
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 514 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV- 687
L +G + V+ + TRE+A QI ++ + G+ V V GG+++ +D +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 688 HIVVGSPGRL 717
HIVVG+PGR+
Sbjct: 163 HIVVGTPGRM 172
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 82.2 bits (194), Expect = 4e-16
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F LL L + GF+ PS +Q +P G D++ +AKSG GKT VF I L++
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 514 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKV- 687
L +G + V+ + TRE+A QI ++ + G+ V V GG+++ +D +
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 161
Query: 688 HIVVGSPGRL 717
HIVVG+PGR+
Sbjct: 162 HIVVGTPGRM 171
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 74.9 bits (176), Expect = 7e-14
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Frame = +1
Query: 325 NVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 504
NV+F M LS L +G+ P+PIQ +P+ G D+ A +GTGKT F +
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 505 LEKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAK 672
LE++ + +V++L PTRE+A Q+ V +++ + + L V + GGL + A
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDLKAQEAA 265
Query: 673 FKKKVHIVVGSPGRL 717
+ +VV +PGRL
Sbjct: 266 LRSGPDVVVATPGRL 280
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 74.5 bits (175), Expect = 9e-14
Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQVMILTPT 558
GF +P+PIQ +P G D++ +++G+GKT F I L+KL + G++ ++++PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 559 REIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
RE+A Q V+K++G GL ++GG + E + + I++ +PGRL
Sbjct: 103 RELALQTFKVVKELG-RFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRL 154
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 74.5 bits (175), Expect = 9e-14
Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQVMILTPT 558
GF +P+PIQ +P G D++ +++G+GKT F I L+KL + G++ ++++PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 559 REIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
RE+A Q V+K++G GL ++GG + E + + I++ +PGRL
Sbjct: 103 RELALQTFKVVKELG-RFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRL 154
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 74.5 bits (175), Expect = 9e-14
Identities = 48/143 (33%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Frame = +1
Query: 304 RDVQIVE-NVT---FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSG 471
+ +QI E N+T F+ + + + L + + +P+Q +P G D+L A++G
Sbjct: 77 KPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTG 136
Query: 472 TGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGL 648
TGKT+ F+I L+KL+++ G+ +ILTPTRE+A QI + +G L V++GG
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPIT-LKCSVIVGGR 195
Query: 649 SVNEDIAKFKKKVHIVVGSPGRL 717
S+ + ++ H+VV +PGRL
Sbjct: 196 SLIHQARELSERPHVVVATPGRL 218
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 74.5 bits (175), Expect = 9e-14
Identities = 48/143 (33%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Frame = +1
Query: 304 RDVQIVE-NVT---FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSG 471
+ +QI E N+T F+ + + + L + + +P+Q +P G D+L A++G
Sbjct: 77 KPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTG 136
Query: 472 TGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGL 648
TGKT+ F+I L+KL+++ G+ +ILTPTRE+A QI + +G L V++GG
Sbjct: 137 TGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPIT-LKCSVIVGGR 195
Query: 649 SVNEDIAKFKKKVHIVVGSPGRL 717
S+ + ++ H+VV +PGRL
Sbjct: 196 SLIHQARELSERPHVVVATPGRL 218
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.1 bits (169), Expect = 5e-13
Identities = 48/163 (29%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
+++ ++ + V I TF L+E + +G+ K +PIQ + +PL G+D++
Sbjct: 325 EVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMAC 384
Query: 460 AKSGTGKTVVFSIIALEKL----NLNNG------LQVMILTPTREIAAQICDVIKQIGSH 609
A++G+GKT F + + +L NLN + +ILTPTRE+A QI + ++ ++
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF-AY 443
Query: 610 HKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKTSYCRK 738
+ ++ V GGL+V + + +K I+VG+ GR+K +C +
Sbjct: 444 QTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIK-HFCEE 485
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.1 bits (169), Expect = 5e-13
Identities = 48/163 (29%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
+++ ++ + V I TF L+E + +G+ K +PIQ + +PL G+D++
Sbjct: 325 EVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMAC 384
Query: 460 AKSGTGKTVVFSIIALEKL----NLNNG------LQVMILTPTREIAAQICDVIKQIGSH 609
A++G+GKT F + + +L NLN + +ILTPTRE+A QI + ++ ++
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF-AY 443
Query: 610 HKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKTSYCRK 738
+ ++ V GGL+V + + +K I+VG+ GR+K +C +
Sbjct: 444 QTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIK-HFCEE 485
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 72.1 bits (169), Expect = 5e-13
Identities = 48/163 (29%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
Frame = +1
Query: 280 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 459
+++ ++ + V I TF L+E + +G+ K +PIQ + +PL G+D++
Sbjct: 325 EVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMAC 384
Query: 460 AKSGTGKTVVFSIIALEKL----NLNNG------LQVMILTPTREIAAQICDVIKQIGSH 609
A++G+GKT F + + +L NLN + +ILTPTRE+A QI + ++ ++
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF-AY 443
Query: 610 HKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRLKTSYCRK 738
+ ++ V GGL+V + + +K I+VG+ GR+K +C +
Sbjct: 444 QTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIK-HFCEE 485
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 72.1 bits (169), Expect = 5e-13
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 510
F LS TL GL + + KP+ IQ + G D++ AK+G+GKT+ I LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 511 ----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFK 678
K + + GL +I++PTRE+A Q I +G+HH G + +V+GG V + +
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHH-GFSCGLVIGGSDVAFERNRI- 195
Query: 679 KKVHIVVGSPGRL 717
++I+V +PGRL
Sbjct: 196 SGINIIVCTPGRL 208
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 70.5 bits (165), Expect = 1e-12
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Frame = +1
Query: 307 DVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 486
D + V+ +F + +S+ G+ KPS IQ +P G D++ A++G+GKT
Sbjct: 37 DEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTG 96
Query: 487 VFSIIALEK-LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNED 663
F+I L+ L+ ++LTPTRE+A QI + +GS GL V++GG+ +
Sbjct: 97 AFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGS-GIGLIAAVIVGGVDMAAQ 155
Query: 664 IAKFKKKVHIVVGSPGRL 717
++ HI+V +PGRL
Sbjct: 156 AMALARRPHIIVATPGRL 173
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 69.7 bits (163), Expect = 3e-12
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Frame = +1
Query: 277 HDLRNSTRTRDVQIVENVTFTSM--LLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDL 450
H S+ T+ + + TF S+ ++ L + GF + IQ + G D+
Sbjct: 49 HQTEESSETKVSEFLTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDV 108
Query: 451 LLEAKSGTGKTVVFSIIALE---KLN--LNNGLQVMILTPTREIAAQICDVIKQIGSHHK 615
L AK+G+GKT+ F + A+E KLN +NG V+I++PTRE++ Q V+ ++
Sbjct: 109 LASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSEL-LEGS 167
Query: 616 GLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
L +VMGG + + + K K V I+V +PGRL
Sbjct: 168 NLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRL 201
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 68.5 bits (160), Expect = 6e-12
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Frame = +1
Query: 373 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL------NLNNGL 534
L+ FQKP+ IQ P+ G D++ AK+G+GKT+ F + AL + G
Sbjct: 144 LLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGP 203
Query: 535 QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGR 714
V++L PTRE+A Q+ +V H GL + + GG S ++ V IVV +PGR
Sbjct: 204 AVLVLLPTRELAQQVQEVSIDF-CHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGR 262
Query: 715 L 717
L
Sbjct: 263 L 263
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 65.7 bits (153), Expect = 4e-11
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF+ L E + +G+ K +PIQ + +PL G D++ A++G+GKT F + +
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMA 612
Query: 511 KLNLNNGL----------QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNE 660
+L N L + +ILTPTRE+ QI + ++ ++ + + V GGL+V
Sbjct: 613 RLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF-AYQTMMEIRPVYGGLAVGY 671
Query: 661 DIAKFKKKVHIVVGSPGRLKTSYCRK 738
+ + +K I+VG+ GR+K +C +
Sbjct: 672 NKGQIEKGATIIVGTVGRIK-HFCEE 696
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 65.7 bits (153), Expect = 4e-11
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF+ L E + +G+ K +PIQ + +PL G D++ A++G+GKT F + +
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMA 612
Query: 511 KLNLNNGL----------QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNE 660
+L N L + +ILTPTRE+ QI + ++ ++ + + V GGL+V
Sbjct: 613 RLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF-AYQTMMEIRPVYGGLAVGY 671
Query: 661 DIAKFKKKVHIVVGSPGRLKTSYCRK 738
+ + +K I+VG+ GR+K +C +
Sbjct: 672 NKGQIEKGATIIVGTVGRIK-HFCEE 696
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 65.7 bits (153), Expect = 4e-11
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 510
TF+ L E + +G+ K +PIQ + +PL G D++ A++G+GKT F + +
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMA 612
Query: 511 KLNLNNGL----------QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNE 660
+L N L + +ILTPTRE+ QI + ++ ++ + + V GGL+V
Sbjct: 613 RLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF-AYQTMMEIRPVYGGLAVGY 671
Query: 661 DIAKFKKKVHIVVGSPGRLKTSYCRK 738
+ + +K I+VG+ GR+K +C +
Sbjct: 672 NKGQIEKGATIIVGTVGRIK-HFCEE 696
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 63.7 bits (148), Expect = 2e-10
Identities = 41/123 (33%), Positives = 73/123 (59%), Gaps = 10/123 (8%)
Frame = +1
Query: 382 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQ---- 537
+G+ + +PIQ + +PL G D+L A++G+GKT F + + +L +LN G +
Sbjct: 316 AGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCY 375
Query: 538 --VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPG 711
+ILTPTRE+A QI + ++ S+ + ++ V GG++V + ++ K I+VG+ G
Sbjct: 376 PRCIILTPTRELADQIYNEGRKF-SYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIG 434
Query: 712 RLK 720
R+K
Sbjct: 435 RVK 437
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 63.7 bits (148), Expect = 2e-10
Identities = 41/123 (33%), Positives = 73/123 (59%), Gaps = 10/123 (8%)
Frame = +1
Query: 382 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQ---- 537
+G+ + +PIQ + +PL G D+L A++G+GKT F + + +L +LN G +
Sbjct: 316 AGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCY 375
Query: 538 --VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPG 711
+ILTPTRE+A QI + ++ S+ + ++ V GG++V + ++ K I+VG+ G
Sbjct: 376 PRCIILTPTRELADQIYNEGRKF-SYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIG 434
Query: 712 RLK 720
R+K
Sbjct: 435 RVK 437
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +1
Query: 388 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF------SIIALEKLNLNNGLQVMIL 549
+ KP+ IQ +P G D++ AK+G+GKT+ F I+ +L +G +IL
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVIL 383
Query: 550 TPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
PTRE+A Q + GL V GG+ ++E IA K+ IVV +PGR+
Sbjct: 384 APTRELAMQTYKEANKFAKP-LGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRM 438
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 61.7 bits (143), Expect = 7e-10
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +1
Query: 343 MLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 522
M L E L G+ GF+KPS IQ V G D+ +++++G+GKTV+ I L+ ++
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 523 NNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVV 699
+ LQV++L P R +A + + +K +G + LNV G + A+ K H+++
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLG---RNLNVNATCLGF---DTTAENDKISHVLM 114
Query: 700 GSP 708
G+P
Sbjct: 115 GTP 117
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/97 (38%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
Frame = +1
Query: 445 DLLLEAKSGTGKTVVFSIIALEKLNLNNGLQ-----VMILTPTREIAAQICDVIKQIGSH 609
D+++E+ +G+GKT+ F ++ + ++ N LQ +IL+P+RE+ +QI VI+ +
Sbjct: 48 DVVVESPTGSGKTLAF-VLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPF-AE 105
Query: 610 HKGLNVEVVMGGLSVNEDIAKFK-KKVHIVVGSPGRL 717
L VE V GG V+++I FK K V+I+V +PGRL
Sbjct: 106 KLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRL 142
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.5 bits (140), Expect = 2e-09
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS------IIALEKLNLNN----GL 534
G+ +P+PIQ +P+G D++ A++G+GKT F I +L K+ G
Sbjct: 320 GYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGP 379
Query: 535 QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGR 714
+I+ PTRE+A QI + + G G+ V+GG S + K + V +V+ +PGR
Sbjct: 380 YAIIMAPTRELAQQIEEETNKFGK-LLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGR 438
Query: 715 L 717
L
Sbjct: 439 L 439
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 58.8 bits (136), Expect = 5e-09
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLI-SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 507
+F S ++ G I +GF+KPSPIQ PL G D + +++G+GKT+ F + AL
Sbjct: 84 SFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPAL 143
Query: 508 EKLNL-------NNGLQ-----VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLS 651
++ N+ Q V++L+PTRE+A QI +K+ + G + GG S
Sbjct: 144 LHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGS 201
Query: 652 VNEDIAKFKKKVHIVVGSPGRL 717
E + + V IV+ +PGRL
Sbjct: 202 RPEQVEACRGGVEIVIATPGRL 223
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 58.0 bits (134), Expect = 8e-09
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Frame = +1
Query: 385 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALE-KLNL----NNGLQ 537
G P+ IQ+ G+P+ G D++ A +G+GKT+ F + LE ++ L + G
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 538 VMILTPTREIAAQICD-VIKQIGSHHKG----LNVEVVMGGLSVNEDIAKFKKKVHIVVG 702
+I+ P+RE+A QI D +I+ + K + + +GG+ + E + +HIVV
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVA 328
Query: 703 SPGRLKTSYCRK 738
+PGRL +K
Sbjct: 329 TPGRLSDMLTKK 340
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 56.4 bits (130), Expect = 3e-08
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSIIA 504
+F + L L L + FQ P+ IQ +PL + +L+ +A+SGTGKT F +
Sbjct: 210 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 269
Query: 505 LEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
L ++++N Q + L PT E+A QI +V++++G L + + G ++ + K
Sbjct: 270 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGR-KL 328
Query: 682 KVHIVVGSPGRLKTSYCRK 738
IV+G+PG + Y +K
Sbjct: 329 TEQIVIGTPG-ITRDYLQK 346
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 56.4 bits (130), Expect = 3e-08
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSIIA 504
+F + L L L + FQ P+ IQ +PL + +L+ +A+SGTGKT F +
Sbjct: 235 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 294
Query: 505 LEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
L ++++N Q + L PT E+A QI +V++++G L + + G ++ + K
Sbjct: 295 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGR-KL 353
Query: 682 KVHIVVGSPGRLKTSYCRK 738
IV+G+PG + Y +K
Sbjct: 354 TEQIVIGTPG-ITRDYLQK 371
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 56.4 bits (130), Expect = 3e-08
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSIIA 504
+F + L L L + FQ P+ IQ +PL + +L+ +A+SGTGKT F +
Sbjct: 619 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 678
Query: 505 LEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKK 681
L ++++N Q + L PT E+A QI +V++++G L + + G ++ + K
Sbjct: 679 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGR-KL 737
Query: 682 KVHIVVGSPGRLKTSYCRK 738
IV+G+PG + Y +K
Sbjct: 738 TEQIVIGTPG-ITRDYLQK 755
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 55.2 bits (127), Expect = 6e-08
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Frame = +1
Query: 382 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----------NLNN 528
SG+ KP+P+Q H +P DL+ A++G+GKT F + ++ + N
Sbjct: 157 SGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTN 216
Query: 529 GLQ-----VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGL-SVNEDIAKFKKKVH 690
G + ++L+PTRE+A QI + S+ + ++ GG + + + + + H
Sbjct: 217 GRRTYYPCALVLSPTRELAIQIHKEATKF-SYKSNIQTAILYGGRENYRDQVNRLRAGTH 275
Query: 691 IVVGSPGRL 717
I++ +PGRL
Sbjct: 276 ILIATPGRL 284
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 55.2 bits (127), Expect = 6e-08
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Frame = +1
Query: 382 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----------NLNN 528
SG+ KP+P+Q H +P DL+ A++G+GKT F + ++ + N
Sbjct: 141 SGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTN 200
Query: 529 GLQ-----VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGL-SVNEDIAKFKKKVH 690
G + ++L+PTRE+A QI + S+ + ++ GG + + + + + H
Sbjct: 201 GRRTYYPCALVLSPTRELAIQIHKEATKF-SYKSNIQTAILYGGRENYRDQVNRLRAGTH 259
Query: 691 IVVGSPGRL 717
I++ +PGRL
Sbjct: 260 ILIATPGRL 268
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 55.2 bits (127), Expect = 6e-08
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Frame = +1
Query: 382 SGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----------NLNN 528
SG+ KP+P+Q H +P DL+ A++G+GKT F + ++ + N
Sbjct: 138 SGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTN 197
Query: 529 GLQ-----VMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGL-SVNEDIAKFKKKVH 690
G + ++L+PTRE+A QI + S+ + ++ GG + + + + + H
Sbjct: 198 GRRTYYPCALVLSPTRELAIQIHKEATKF-SYKSNIQTAILYGGRENYRDQVNRLRAGTH 256
Query: 691 IVVGSPGRL 717
I++ +PGRL
Sbjct: 257 ILIATPGRL 265
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 52.8 bits (121), Expect = 3e-07
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F+ + L E+ + ++G+ +P+P+Q + +P + G DL+ A++G+GKT F ++ L
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAF-LVPLVN 226
Query: 514 LNLNNG------------------LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVM 639
L +G ++L+PTRE++ QI + ++ ++ + ++
Sbjct: 227 AILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF-AYRTPITSALLY 285
Query: 640 GGL-SVNEDIAKFKKKVHIVVGSPGRL 717
GG + + I K + HI++ +PGRL
Sbjct: 286 GGRENYKDQIHKLRLGCHILIATPGRL 312
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 50.8 bits (116), Expect = 1e-06
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +1
Query: 331 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF------ 492
+F + + + S +++P+PIQ +P G D+L AK+G+GKT +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 493 SIIALEKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAK 672
I+ L G +I+ PTRE+A Q+ K+ + +N GG S E +
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVY-NINPICAYGGGSKWEQSNE 384
Query: 673 FKKK-VHIVVGSPGRL 717
+ + +VV +PGR+
Sbjct: 385 LQNEGAEMVVCTPGRI 400
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 44.4 bits (100), Expect = 1e-04
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Frame = +1
Query: 364 LAGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---- 528
L + GF +P+ IQ +P + D+L A++G+GKT+ F I + +L ++
Sbjct: 167 LEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQ 226
Query: 529 --------GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKK 684
G + +I+ PTRE+ QI I + S + + +V G V ++ +++
Sbjct: 227 ETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQR 286
Query: 685 VHIVVGSPGRL 717
IVV +PGRL
Sbjct: 287 PDIVVATPGRL 297
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Frame = +1
Query: 334 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 513
F+ +S L L + ++PSPIQ+ +P ++L A +G+GKT+ F++ +++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 514 L-----------NLNNGLQVMILTPTREIAAQ 576
+ + ++ L ++L PTRE+AAQ
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.5 bits (93), Expect = 8e-04
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Frame = +1
Query: 388 FQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN------------ 528
F +P+ IQ +P + D+L A++G+GKT+ F I + +L ++
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 529 GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSP 708
G + +I+ PTRE+ QI I + S + + +V G V ++ +++ IVV +P
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATP 127
Query: 709 GRL 717
GRL
Sbjct: 128 GRL 130
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 36.3 bits (80), Expect = 0.029
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Frame = +1
Query: 274 AHDLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLL 453
A ++RN+ + DV++ ++T+ L L L + IQ +P G D+L
Sbjct: 368 AVEIRNAEK--DVRLT---SWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVL 422
Query: 454 LEAKSGTGKTVVFSIIALEKL-----------NLNNGLQVMILTPTREIAAQICDVIKQI 600
+A++ GKT F + ++K+ ++G +IL PTRE+AAQI + ++
Sbjct: 423 GQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTY 482
Query: 601 GSHHKGLNVEVVMGGLSVNEDIAKFKKKVHIVVGSPGRL 717
+ + V + G + + + I++G+ GR+
Sbjct: 483 -CQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRI 520
>Z83238-7|CAB05797.1| 313|Caenorhabditis elegans Hypothetical
protein T08G3.8 protein.
Length = 313
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -3
Query: 690 VYFFLKLSYVFIYR*SSHYNFDIQTLVV*SYLFNNITYLCCYFS 559
VY +KLSY F+YR + Y+ D+ ++ ++ I + C+F+
Sbjct: 29 VYILIKLSYYFLYRKNKCYSTDLHPVLFRQFM---IMQIACFFN 69
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 373 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 498
L S + P+ +Q +P G D L+ A++G+GKT FS+
Sbjct: 17 LSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSL 58
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 409 QLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA-LEKLNLNN 528
+LH +P +CG L L +G GK+ I+A +K NL N
Sbjct: 104 KLHRLPTPRCGEVLGLVGTNGIGKSTALKILAGKQKPNLGN 144
>Z78412-5|CAB01648.1| 484|Caenorhabditis elegans Hypothetical
protein M176.6a protein.
Length = 484
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -1
Query: 680 FLNLAMSSFTDNPPITTSTFRPLWCDPICLITSHICAAISRVGVKIITCK 531
+ N SFT+NP I++ L+ D + +I IC + + V + K
Sbjct: 19 YSNSTFESFTENPHISSQISNVLYMDQMFIIYILICILLILISVIVYLSK 68
>L03524-2|AAA28151.1| 488|Caenorhabditis elegans protein-tyrosine
kinase protein.
Length = 488
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -1
Query: 680 FLNLAMSSFTDNPPITTSTFRPLWCDPICLITSHICAAISRVGVKIITCK 531
+ N SFT+NP I++ L+ D + +I IC + + V + K
Sbjct: 23 YSNSTFESFTENPHISSQISNVLYMDQMFIIYILICILLILISVIVYLSK 72
>AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical
protein Y75B8A.1 protein.
Length = 275
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 58 KKNRLFPKARTLNVFKEYLYNCF 126
KK + + KA+TL + KE+LYN +
Sbjct: 201 KKRKPYTKAQTLELEKEFLYNTY 223
>AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain
protein PHP-3 protein.
Length = 275
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 58 KKNRLFPKARTLNVFKEYLYNCF 126
KK + + KA+TL + KE+LYN +
Sbjct: 201 KKRKPYTKAQTLELEKEFLYNTY 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,205,437
Number of Sequences: 27780
Number of extensions: 376819
Number of successful extensions: 1058
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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