Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_J06
(920 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.011
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.025
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.025
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.057
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.057
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.53
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.70
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 2.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.7
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.011
Identities = 24/83 (28%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Frame = +3
Query: 609 GXXPQXXGHGGXQXP*XXPPPXXLNTXN---PPPXRGXXPPTPPKRXXPTXXEKNPXXAP 779
G P G P PPP + PP R PP PP+ T + P +
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSS 382
Query: 780 -----PPXETPLXPXXSPPXPPP 833
PP P P S P PP
Sbjct: 383 RAVSNPPAPPPAIPGRSAPALPP 405
Score = 32.7 bits (71), Expect = 0.075
Identities = 39/146 (26%), Positives = 45/146 (30%), Gaps = 19/146 (13%)
Frame = +3
Query: 525 TPTLXGGGXXPPXPGGXRXXPXXPX----APPGXXPQXXGHGGXQXP*XXPP-PXXLNTX 689
TPT PP R P APP P +G P PP P +
Sbjct: 223 TPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPP--SNGTVSSPPNSPPRPIAPVSM 280
Query: 690 NPPPXRGXXPPTPPKRXXPTXX-----EKNPXXAPPPX-----ETPLXPXXS----PPXP 827
NP PP PP + +K P PPP + P+ S PP P
Sbjct: 281 NPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP 340
Query: 828 PPPXXXAXXXXXXXXXXXXXXXPNPP 905
PPP A P PP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 32.7 bits (71), Expect = 0.075
Identities = 30/109 (27%), Positives = 33/109 (30%), Gaps = 8/109 (7%)
Frame = +3
Query: 528 PTLXGGGXXPPXPGGXRXXPXXPX--APP-GXXPQXXGHG-GXQXP*XXPP--PXXLNTX 689
P G P P G P P AP G P P PP P
Sbjct: 343 PRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPA 402
Query: 690 NPPPXRGXXPPTPPKRXXPTXXEKNPXXAPP--PXETPLXPXXSPPXPP 830
PP TPP P+ P PP P P+ +PP PP
Sbjct: 403 LPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 32.3 bits (70), Expect = 0.100
Identities = 27/95 (28%), Positives = 30/95 (31%), Gaps = 1/95 (1%)
Frame = +3
Query: 546 GXXPPXPGGXRXXPXXPXAPPGXXPQXXGHGGXQXP*XXPPPXXLNTXNPP-PXRGXXPP 722
G PP R P APP P G P P T PP P PP
Sbjct: 373 GRQPPPLSSSRAVSNPP-APPPAIP------GRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Query: 723 TPPKRXXPTXXEKNPXXAPPPXETPLXPXXSPPXP 827
+ P P+ P AP P +PP P
Sbjct: 426 SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 30.3 bits (65), Expect = 0.40
Identities = 29/101 (28%), Positives = 32/101 (31%), Gaps = 8/101 (7%)
Frame = +3
Query: 555 PPXP-----GGXRXXPXXPXAPPGXXPQXXGHGGXQXP*XXPPPXXLNTXNPPPXRGXXP 719
PP P G P APP P+ G Q P P NPP P
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP---PLSSSRAVSNPPAP----P 392
Query: 720 PTPPKRXXPTXX---EKNPXXAPPPXETPLXPXXSPPXPPP 833
P P R P + PP P P +PP PP
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = +3
Query: 678 LNTXNPPPXRGXXPPTPPKRXXPTXXEKNPXX---APPPXETPLXPXXSPPXPPPPXXXA 848
LN P PP PP E+ P APPP P S P PP A
Sbjct: 217 LNESAGTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIA 276
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 8/68 (11%)
Frame = +3
Query: 651 P*XXPPPXXLNTXNPPPXRG-----XXPPTPPKRXXPTXXEKNP---XXAPPPXETPLXP 806
P PPP N PP G PP PP R P APPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 807 XXSPPXPP 830
PP
Sbjct: 371 STGRQPPP 378
Score = 27.5 bits (58), Expect = 2.8
Identities = 27/97 (27%), Positives = 28/97 (28%), Gaps = 4/97 (4%)
Frame = +3
Query: 555 PPXPGGXRXXPXXPXAPPGXXPQXXGHGGXQXP*XXPP--PXXLNTXNPPPXRGXXPPTP 728
PP P P PP P PP P L PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 729 PKRXXPTXXEKNPXXAPPPXETPLXPXXS--PPXPPP 833
P P+ P A P PL P PP P P
Sbjct: 448 P--LPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.025
Identities = 28/102 (27%), Positives = 31/102 (30%), Gaps = 5/102 (4%)
Frame = +3
Query: 558 PXPGGXRXXPXXPXAPPGXXPQXXGHGGXQXP*XXPPPXXLNTXNPPPX---RGXXPPTP 728
P P G P A P P G P PP + PP PP P
Sbjct: 1134 PVPSGAPPVPKPSVAAP-PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Query: 729 PKRXXPTXXEKN--PXXAPPPXETPLXPXXSPPXPPPPXXXA 848
P P + + PPP P P S PP P A
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA 1234
Score = 33.1 bits (72), Expect = 0.057
Identities = 21/71 (29%), Positives = 24/71 (33%)
Frame = +2
Query: 605 PRXXPPKXGPRRXTXPLXXPAPXXP*HKXPPPXXGXTPAHPPKKXXPXPXXKKPXXGXXP 784
P PP P P+ P+ P P P G P PP + P P KP G P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIP--PVPKPAAGVPPVPPPSEAPPVP---KPSVGVPP 1209
Query: 785 XGNPXXPXXFP 817
P P
Sbjct: 1210 VPPPSTAPPVP 1220
Score = 30.3 bits (65), Expect = 0.40
Identities = 28/102 (27%), Positives = 31/102 (30%)
Frame = +3
Query: 528 PTLXGGGXXPPXPGGXRXXPXXPXAPPGXXPQXXGHGGXQXP*XXPPPXXLNTXNPPPXR 707
P + PP P P P G P G PPP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP---VPPPSEAPPV-PKPSV 1205
Query: 708 GXXPPTPPKRXXPTXXEKNPXXAPPPXETPLXPXXSPPXPPP 833
G PP PP P P PP P+ +PP P P
Sbjct: 1206 GV-PPVPPPSTAPPV--PTPSAGLPP--VPVPTAKAPPVPAP 1242
Score = 29.9 bits (64), Expect = 0.53
Identities = 28/97 (28%), Positives = 30/97 (30%), Gaps = 7/97 (7%)
Frame = +2
Query: 527 PHPXXXXXXSPXPXGXXXXTP*XXGPPRXXPPKXGPRRXTXPLXXPA----PXXP*HKXP 694
P P P P G P P PP P P+ PA P P + P
Sbjct: 1143 PKPSVAAPPVPAPSG----APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Query: 695 P---PXXGXTPAHPPKKXXPXPXXKKPXXGXXPXGNP 796
P P G P PP P P P G P P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVP---TPSAGLPPVPVP 1232
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/94 (22%), Positives = 25/94 (26%), Gaps = 1/94 (1%)
Frame = +3
Query: 558 PXPGGXRXXPXXPXAPPGXXPQXXGHGGXQXP*XXPP-PXXLNTXNPPPXRGXXPPTPPK 734
P P G P PP P + PP P P PP P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 735 RXXPTXXEKNPXXAPPPXETPLXPXXSPPXPPPP 836
P + + P P + P P PP
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +3
Query: 666 PPXXLNTXNPP-PXRGXXPPTPPKRXXPTXXEKNPXXAPPPXETPL-XPXXSPPXPPP 833
PP + T PP P P+ P P + P P P+ P PP P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPP-PVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.025
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 693 PPPXRGXXPPTPPKRXXPTXXEKNPXXAPPPXETPLXPXXSPPXPPPPXXXA 848
PPP PTP P PPP P + P PPPP A
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 33.1 bits (72), Expect = 0.057
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = +3
Query: 663 PPPXXLNTXNPPPXRGXXPPTPPKRXXPTXXEKNPXXAPPPXETPLXPXXSPPXPPPPXX 842
PPP + P P PP P P P PPP P PP PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGP------PPPPPPPGVAGAGPP--PPPPPPPAV 785
Query: 843 XA 848
A
Sbjct: 786 SA 787
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 602 PPRXXPPKXGPRRXTXPLXXPAPXXP*HKXPPPXXGXTPAHPPKKXXPXP 751
PP P P P+ PAP PPP G A PP P P
Sbjct: 736 PPAVIVPTPAPA--PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 653 LXXPAPXXP*HKXPPPXXGXTPAHPPKKXXPXPXXKKPXXGXXPXGNPXXPXXFPPXA 826
L P P P P P P PP P P G G P P PP A
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP--PPPA 784
Score = 26.2 bits (55), Expect = 6.5
Identities = 19/71 (26%), Positives = 22/71 (30%), Gaps = 5/71 (7%)
Frame = +3
Query: 600 APPGXXPQXXGHGGXQXP*XXPPPXXLNTXNPPPX-----RGXXPPTPPKRXXPTXXEKN 764
+PP P P PPP + PPP G PP PP +
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 765 PXXAPPPXETP 797
AP P P
Sbjct: 791 RYYAPAPQAEP 801
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.057
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 666 PPXXLNTXNPPPXRGXXPPTPPKRXXPTXXEKNPXXAPPPXETPLXPXXSPPXPPPP 836
PP + PP PP PP P PP P P S P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +3
Query: 696 PPXRGXXPPTPPKRXXPTXXEKNPXXAPPPXETPLXPXXSPPXPPPPXXXA 848
PP R PP+ PT P PPP P P PP PPP A
Sbjct: 1690 PPVR-PQSAAPPQMSAPTPPPP-PMSVPPPPSAPPMPA-GPPSAPPPPLPA 1737
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/69 (26%), Positives = 22/69 (31%)
Frame = +3
Query: 585 PXXPXAPPGXXPQXXGHGGXQXP*XXPPPXXLNTXNPPPXRGXXPPTPPKRXXPTXXEKN 764
P P + P PQ P PPP + PPP P PP P +
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVP---PPPSAPPMPAGPPSAPPPPLPASS 1739
Query: 765 PXXAPPPXE 791
P P +
Sbjct: 1740 APSVPNPGD 1748
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.057
Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
Frame = +3
Query: 600 APPGXXPQXXGHGGXQXP*XXPPPXXLNTXNP---PPXRGXXPPTP---PKRXXPTXXEK 761
APP + P PP + +P PP PP P P P K
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 762 NPXXAPP-PXETPLXPXXSPPXPPPPXXXA 848
+P AP P P P P PPPP A
Sbjct: 183 SPPSAPSLPSAVPPMP---PKVPPPPLSQA 209
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.53
Identities = 31/93 (33%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Frame = -2
Query: 820 GGEXXGXXGVSXGGGAXXGFFSXXVGXXLFGGVGGXXPLXGG-GXFVLRXXGGGXXQGXC 644
GG G G S G G F FGG GG GG G F G G +G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGG------FGGFGGEGHHHGGHGGF---GGGPGGFEGG- 236
Query: 643 XPPWPXFWGXXPGGAXGSXGXXRXPPGXGGXXP 545
P +G PGG G G PG G P
Sbjct: 237 ----PGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.70
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +3
Query: 765 PXXAPPPXETP-LXPXXSPPXPPPP 836
P PPP P P PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.0 bits (52), Expect(2) = 2.1
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +3
Query: 669 PXXLNTXNPPPXRGXXPPTPPKRXXPTXXEKNPXX--APPPXETPLXPXXSPPXPPPP 836
P + PPP PP P K T + A + P PP PPPP
Sbjct: 899 PTIITHPTPPPP----PPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPP 952
Score = 21.0 bits (42), Expect(2) = 2.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 816 PPXPPPPXXXA 848
PP PPPP A
Sbjct: 947 PPPPPPPLVSA 957
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Frame = +3
Query: 696 PPXRGXXPPT---PPKRXXPTXXEKNPXXAPPPXETPLXPXXSPPXPPPP 836
P G PT P P + P A P P PP PPPP
Sbjct: 148 PSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 26.6 bits (56), Expect = 4.9
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 12/61 (19%)
Frame = +3
Query: 690 NPPPXRGXXPPTPPKRXXPTXXEKNPXX--------AP--PPXETP--LXPXXSPPXPPP 833
NPPP PP PP P +P PP TP P +PP PPP
Sbjct: 188 NPPPP----PPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPP 243
Query: 834 P 836
P
Sbjct: 244 P 244
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +3
Query: 699 PXRGXXPPTPPKRXXPTXXEKNPXXAPPPXETPLXPXXSPPXPPPP 836
P RG P+ P R N PPP P+ P PPPP
Sbjct: 115 PSRGT--PSLPSRPGSRPSVLNQEQVPPP---PVRPNVMSQMPPPP 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.146 0.491
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,692,092
Number of Sequences: 5004
Number of extensions: 22038
Number of successful extensions: 184
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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