Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_J06
         (920 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.049
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   7.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.1 bits (67), Expect = 0.049
 Identities = 28/93 (30%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
 Frame = +3

Query: 555 PPXPGGX--RXXPXXPXAPPGXXPQXXGHGGXQXP*XXPPPXXLNTXNPPPXRGXXPPTP 728
           PP   G   R     P  PP   P   G      P   PPP  LN    P      P  P
Sbjct: 512 PPHGAGYDGRDLTGGPLGPP-PPPPPGGAVLNIPPQFLPPP--LNLLRAP----FFPLNP 564

Query: 729 PKRXXPTXXEKNPXXAPPPXETPLXPXXSPPXP 827
            +   P      P   PPP   P  P   PP P
Sbjct: 565 AQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSP 597



 Score = 27.9 bits (59), Expect = 0.46
 Identities = 22/67 (32%), Positives = 22/67 (32%)
 Frame = +3

Query: 636 GGXQXP*XXPPPXXLNTXNPPPXRGXXPPTPPKRXXPTXXEKNPXXAPPPXETPLXPXXS 815
           GG   P   PPP      N PP     PP P           NP     P   P  P   
Sbjct: 525 GGPLGPPPPPPPGGA-VLNIPPQ--FLPP-PLNLLRAPFFPLNPAQLRFPAGFPNLPNAQ 580

Query: 816 PPXPPPP 836
           PP  PPP
Sbjct: 581 PPPAPPP 587



 Score = 23.4 bits (48), Expect = 9.8
 Identities = 13/41 (31%), Positives = 14/41 (34%)
 Frame = +3

Query: 678 LNTXNPPPXRGXXPPTPPKRXXPTXXEKNPXXAPPPXETPL 800
           L    PPP     PP PP    P+     P   P     PL
Sbjct: 576 LPNAQPPPA---PPPPPPMGPPPSPLAGGPLGGPAGSRPPL 613


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
 Frame = +3

Query: 594 PXAPPGXXPQXXGHGGXQXP*XXPPPXXLNTXNPPPXRGXXPPTPPKRXXPTXXEKNPXX 773
           P  PPG  PQ     G       PP     T   PP  G   P PP    P   +  P  
Sbjct: 183 PGMPPG--PQMMRPPGN----VGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGA 236

Query: 774 AP--PPXETPLXPXXSPPXPPP 833
            P   P   P  P       PP
Sbjct: 237 VPGMQPGMQPRPPSAQGMQRPP 258



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 19/79 (24%), Positives = 26/79 (32%)
 Frame = +3

Query: 594 PXAPPGXXPQXXGHGGXQXP*XXPPPXXLNTXNPPPXRGXXPPTPPKRXXPTXXEKNPXX 773
           P   PG  P+     G Q P     P  +    P P  G  P   P+    +    +   
Sbjct: 238 PGMQPGMQPRPPSAQGMQRPPMMGQPPPIRP--PNPMGGPRPQISPQNSNLSGGMPSGMV 295

Query: 774 APPPXETPLXPXXSPPXPP 830
            PP    P+    +P  PP
Sbjct: 296 GPPRPPMPM-QGGAPGGPP 313


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = -2

Query: 805 GXXGVSXGGGAXXGFFSXXVGXXLFGGVGGXXPLXGGGXFV 683
           G  G   GGG   G  S  +G    GG GG      GG  +
Sbjct: 654 GGGGGGGGGGGSVG--SGGIGSSSLGGGGGSGRSSSGGGMI 692


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 212 GXXPPXGTGGGXGXRXXXGGG 274
           G   P G GGG G     GGG
Sbjct: 539 GPVGPAGVGGGGGGGGGGGGG 559


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.146    0.491 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,531
Number of Sequences: 2352
Number of extensions: 9051
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)