Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_J05
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0006 + 11426346-11426420,11426733-11427452                       31   1.6  
12_02_0346 - 17776871-17781445                                         30   2.8  
10_08_1064 + 22636603-22636785,22636901-22637671,22637749-22638960     29   3.7  
01_06_1740 - 39575614-39576981                                         28   8.6  

>09_03_0006 + 11426346-11426420,11426733-11427452
          Length = 264

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 777 TGPVDRTEWAQCWPAARPAPXEDGRAQPSGSLSTS 673
           T P+  T W+  WPA RP      R  P  +LSTS
Sbjct: 148 TAPLVSTSWSAMWPALRPMSLT--RLTPFAALSTS 180


>12_02_0346 - 17776871-17781445
          Length = 1524

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 744 CWPAARP-APXEDGRAQPSGSLSTSQG*LHIETVHSEPGADAPTDEQHVE 598
           C  +AR  A  E+GR  P+ ++          TVH++  A A T+EQH++
Sbjct: 133 CSASARSHADAEEGRCLPATAVGKLLPCCSPPTVHNDDAAGAKTNEQHLQ 182


>10_08_1064 + 22636603-22636785,22636901-22637671,22637749-22638960
          Length = 721

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 619 WGIGTWLGVNGLYVQLPLARREAARGLGPAVLA 717
           + + T LG+  L + LPL   EAA+GL P   A
Sbjct: 348 FSLATSLGLGALALDLPLTAAEAAKGLVPPATA 380


>01_06_1740 - 39575614-39576981
          Length = 455

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 22/75 (29%), Positives = 32/75 (42%)
 Frame = -2

Query: 780 VTGPVDRTEWAQCWPAARPAPXEDGRAQPSGSLSTSQG*LHIETVHSEPGADAPTDEQHV 601
           VT P +     + +PAARP   E G A  +    TS G        + PG  +P+  +  
Sbjct: 175 VTYPAEPAPPGRTFPAARPPQDEPGFATAARHPRTSPG------TPALPGRSSPSPWRPH 228

Query: 600 ERHASLSAPHPHVEA 556
               S ++P P  EA
Sbjct: 229 NEPGSYASPSPSSEA 243


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,502,265
Number of Sequences: 37544
Number of extensions: 416555
Number of successful extensions: 1057
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)