Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_J05
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009750-1|AAH09750.2| 469|Homo sapiens chromosome 20 open read... 46 1e-04
AL118502-2|CAH73078.2| 415|Homo sapiens chromosome 20 open read... 46 1e-04
AL118502-1|CAH73077.2| 469|Homo sapiens chromosome 20 open read... 46 1e-04
AK074650-1|BAC11113.1| 415|Homo sapiens protein ( Homo sapiens ... 46 1e-04
BC002917-1|AAH02917.1| 445|Homo sapiens G protein-coupled recep... 36 0.19
AY070774-1|AAL59882.1| 445|Homo sapiens PERV-A receptor 1 protein. 36 0.19
AK027888-1|BAB55433.1| 445|Homo sapiens protein ( Homo sapiens ... 36 0.19
AK021918-1|BAB13936.1| 445|Homo sapiens protein ( Homo sapiens ... 36 0.19
BC092473-1|AAH92473.1| 448|Homo sapiens GPR172B protein protein. 35 0.45
BC060810-1|AAH60810.1| 448|Homo sapiens G protein-coupled recep... 35 0.45
AY070775-1|AAL59883.1| 448|Homo sapiens PERV receptor A2 protein. 35 0.45
AK000922-1|BAA91427.1| 448|Homo sapiens protein ( Homo sapiens ... 35 0.45
AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens ... 31 7.3
BC119626-1|AAI19627.1| 152|Homo sapiens SLIC1 protein protein. 30 9.6
BC027944-1|AAH27944.1| 129|Homo sapiens SLIC1 protein protein. 30 9.6
AY302441-1|AAP58362.1| 316|Homo sapiens selectin ligand interac... 30 9.6
>BC009750-1|AAH09750.2| 469|Homo sapiens chromosome 20 open reading
frame 54 protein.
Length = 469
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +3
Query: 723 LAVQLANIGPILYGLLGRLRXHA-SDSPYIYGLLIVGTLSLIINAFVYEMTT 875
+ +QLANIGP+L LL R S+ P I+ LL VGT++ II AF++ MT+
Sbjct: 46 VVIQLANIGPLLVTLLHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTS 97
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 LLIC-WGIGTWLGVNGLYVQLPLARREAARG 696
LL+C +G+G+W+ +NGL+V+LPL E G
Sbjct: 7 LLVCVFGMGSWVTINGLWVELPLLVMELPEG 37
>AL118502-2|CAH73078.2| 415|Homo sapiens chromosome 20 open reading
frame 54 protein.
Length = 415
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +3
Query: 723 LAVQLANIGPILYGLLGRLRXHA-SDSPYIYGLLIVGTLSLIINAFVYEMTT 875
+ +QLANIGP+L LL R S+ P I+ LL VGT++ II AF++ MT+
Sbjct: 46 VVIQLANIGPLLVTLLHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTS 97
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 LLIC-WGIGTWLGVNGLYVQLPLARREAARG 696
LL+C +G+G+W+ +NGL+V+LPL E G
Sbjct: 7 LLVCVFGMGSWVTINGLWVELPLLVMELPEG 37
>AL118502-1|CAH73077.2| 469|Homo sapiens chromosome 20 open reading
frame 54 protein.
Length = 469
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +3
Query: 723 LAVQLANIGPILYGLLGRLRXHA-SDSPYIYGLLIVGTLSLIINAFVYEMTT 875
+ +QLANIGP+L LL R S+ P I+ LL VGT++ II AF++ MT+
Sbjct: 46 VVIQLANIGPLLVTLLHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTS 97
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 LLIC-WGIGTWLGVNGLYVQLPLARREAARG 696
LL+C +G+G+W+ +NGL+V+LPL E G
Sbjct: 7 LLVCVFGMGSWVTINGLWVELPLLVMELPEG 37
>AK074650-1|BAC11113.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ90169 fis, clone MAMMA1000226. ).
Length = 415
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +3
Query: 723 LAVQLANIGPILYGLLGRLRXHA-SDSPYIYGLLIVGTLSLIINAFVYEMTT 875
+ +QLANIGP+L LL R S+ P I+ LL VGT++ II AF++ MT+
Sbjct: 46 VVIQLANIGPLLVTLLHHFRPSCLSEVPIIFTLLGVGTVTCIIFAFLWNMTS 97
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 607 LLIC-WGIGTWLGVNGLYVQLPLARREAARG 696
LL+C +G+G+W+ +NGL+V+LPL E G
Sbjct: 7 LLVCVFGMGSWVTINGLWVELPLLVMELPEG 37
>BC002917-1|AAH02917.1| 445|Homo sapiens G protein-coupled receptor
172A protein.
Length = 445
Score = 35.9 bits (79), Expect = 0.19
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 586 RRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARG 696
R V +L+ +G+G+W VNG++V+LP+ +E G
Sbjct: 8 RPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEG 44
>AY070774-1|AAL59882.1| 445|Homo sapiens PERV-A receptor 1 protein.
Length = 445
Score = 35.9 bits (79), Expect = 0.19
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 586 RRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARG 696
R V +L+ +G+G+W VNG++V+LP+ +E G
Sbjct: 8 RPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEG 44
>AK027888-1|BAB55433.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ14982 fis, clone Y79AA1000258. ).
Length = 445
Score = 35.9 bits (79), Expect = 0.19
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 586 RRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARG 696
R V +L+ +G+G+W VNG++V+LP+ +E G
Sbjct: 8 RPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEG 44
>AK021918-1|BAB13936.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ11856 fis, clone HEMBA1006789. ).
Length = 445
Score = 35.9 bits (79), Expect = 0.19
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 586 RRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARG 696
R V +L+ +G+G+W VNG++V+LP+ +E G
Sbjct: 8 RPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEG 44
>BC092473-1|AAH92473.1| 448|Homo sapiens GPR172B protein protein.
Length = 448
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 586 RRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARG 696
R V +L+ +G+G+W VNG++V+LP+ ++ G
Sbjct: 8 RLVLTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEG 44
>BC060810-1|AAH60810.1| 448|Homo sapiens G protein-coupled receptor
172B protein.
Length = 448
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 586 RRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARG 696
R V +L+ +G+G+W VNG++V+LP+ ++ G
Sbjct: 8 RLVLTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEG 44
>AY070775-1|AAL59883.1| 448|Homo sapiens PERV receptor A2 protein.
Length = 448
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 586 RRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARG 696
R V +L+ +G+G+W VNG++V+LP+ ++ G
Sbjct: 8 RLVLTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEG 44
>AK000922-1|BAA91427.1| 448|Homo sapiens protein ( Homo sapiens
cDNA FLJ10060 fis, clone HEMBA1001407. ).
Length = 448
Score = 34.7 bits (76), Expect = 0.45
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 586 RRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARG 696
R V +L+ +G+G+W VNG++V+LP+ ++ G
Sbjct: 8 RLVLTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEG 44
>AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ42813 fis, clone BRCAN2012355. ).
Length = 180
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -2
Query: 426 HLCSFTK-YFFLHHHSILF*TF*VHILTR-HIFITV*CF--FFIKLIRCITIYLYLFIQY 259
+LC +T Y H H ++ V+I T HI + + + ++ + CI IY+Y++ Y
Sbjct: 78 YLCMYTHTYMCAHIHMCVYTYIYVYIYTHIHICVHINMYVSIYVYIYTCIQIYIYMYTLY 137
>BC119626-1|AAI19627.1| 152|Homo sapiens SLIC1 protein protein.
Length = 152
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 772 PSRPYRMGPMLASCTASTXRGRQGPALGQPLDEPGVAAHRD 650
P P MGP + CTA T + + PA G L PG H D
Sbjct: 7 PGSPGCMGP-ITQCTARTQQ--EAPATGPDLPHPGPDGHLD 44
>BC027944-1|AAH27944.1| 129|Homo sapiens SLIC1 protein protein.
Length = 129
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 772 PSRPYRMGPMLASCTASTXRGRQGPALGQPLDEPGVAAHRD 650
P P MGP + CTA T + + PA G L PG H D
Sbjct: 7 PGSPGCMGP-ITQCTARTQQ--EAPATGPDLPHPGPDGHLD 44
>AY302441-1|AAP58362.1| 316|Homo sapiens selectin ligand interactor
cytoplasmic-1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 772 PSRPYRMGPMLASCTASTXRGRQGPALGQPLDEPGVAAHRD 650
P P MGP + CTA T + + PA G L PG H D
Sbjct: 7 PGSPGCMGP-ITQCTARTQQ--EAPATGPDLPHPGPDGHLD 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,227,874
Number of Sequences: 237096
Number of extensions: 2494209
Number of successful extensions: 9137
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9130
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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