Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_J05
         (880 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071469-1|AAL49091.1|  395|Drosophila melanogaster RE54692p pro...    50   6e-06
AE014297-4819|AAF57205.3|  487|Drosophila melanogaster CG11576-P...    48   2e-05
X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protei...    30   4.8  
M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein.     30   4.8  
AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA ...    30   4.8  
BT024279-1|ABC86341.1| 1108|Drosophila melanogaster IP14124p pro...    29   6.4  
AE014296-2211|AAF49869.1| 1371|Drosophila melanogaster CG14120-P...    29   6.4  

>AY071469-1|AAL49091.1|  395|Drosophila melanogaster RE54692p
           protein.
          Length = 395

 Score = 49.6 bits (113), Expect = 6e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
 Frame = +1

Query: 598 LDVLLICWGIGTWLGVNGLYVQLPLARREAARGLG-PAVLA 717
           +DVL I +GIGTWLGVNG ++QLPL   EA  G G P+ L+
Sbjct: 76  VDVLAIFFGIGTWLGVNGTFIQLPLLVDEAPEGWGLPSYLS 116



 Score = 36.3 bits (80), Expect = 0.056
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +3

Query: 729 VQLANIGPILYGLLGRLRXHA-SDSPYIYGLLIVGTLSLIINAFVYEMT 872
           VQ+ N+GP+LY  + +      +D   I+G+L+V  +S ++ AF Y  T
Sbjct: 119 VQIGNLGPLLYTAIQKYSPKKLNDGWTIHGVLLVRAISCLLTAFFYNQT 167


>AE014297-4819|AAF57205.3|  487|Drosophila melanogaster CG11576-PA
           protein.
          Length = 487

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = +1

Query: 598 LDVLLICWGIGTWLGVNGLYVQLPLARREAARG 696
           +DVL I +GIGTWLGVNG ++QLPL   EA  G
Sbjct: 76  VDVLAIFFGIGTWLGVNGTFIQLPLLVDEAPEG 108



 Score = 39.5 bits (88), Expect = 0.006
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 729 VQLANIGPILYGLLGRLRXHA-SDSPYIYGLLIVGTLSLIINAFVYEMT 872
           VQ+ N+GP+LY  + +      +D   I+G+L+VG +S ++ AF Y  T
Sbjct: 119 VQIGNLGPLLYTAIQKYSPKKLNDGWTIHGVLLVGAISCLLTAFFYNQT 167


>X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protein
           protein.
          Length = 1299

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 485 FSRQVNQLIHKDEGFTRNFHIYVLSQNIFSYITIQF 378
           FSR+V QL+ K      N+ IYV S      I  +F
Sbjct: 389 FSREVEQLLRKQSRIATNYDIYVFSSAALDDILAKF 424


>M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein.
          Length = 1286

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 485 FSRQVNQLIHKDEGFTRNFHIYVLSQNIFSYITIQF 378
           FSR+V QL+ K      N+ IYV S      I  +F
Sbjct: 389 FSREVEQLLRKQSRIATNYDIYVFSSAALDDILAKF 424


>AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA
           protein.
          Length = 1286

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 485 FSRQVNQLIHKDEGFTRNFHIYVLSQNIFSYITIQF 378
           FSR+V QL+ K      N+ IYV S      I  +F
Sbjct: 389 FSREVEQLLRKQSRIATNYDIYVFSSAALDDILAKF 424


>BT024279-1|ABC86341.1| 1108|Drosophila melanogaster IP14124p protein.
          Length = 1108

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 562  NVRMWGAQRRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARGLGP 705
            +VR + A   +T+D     WG+ T   VNG+  +L L   E   GL P
Sbjct: 971  SVRKFVADENITVDCYTGTWGVSTLPDVNGIGRELYLDFDENNNGLIP 1018


>AE014296-2211|AAF49869.1| 1371|Drosophila melanogaster CG14120-PA
            protein.
          Length = 1371

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 562  NVRMWGAQRRVTLDVLLICWGIGTWLGVNGLYVQLPLARREAARGLGP 705
            +VR + A   +T+D     WG+ T   VNG+  +L L   E   GL P
Sbjct: 1234 SVRKFVADENITVDCYTGTWGVSTLPDVNGIGRELYLDFDENNNGLIP 1281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,744,590
Number of Sequences: 53049
Number of extensions: 716714
Number of successful extensions: 1575
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)