Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_J03
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70680-4|CAA94569.1|  274|Caenorhabditis elegans Hypothetical pr...    31   0.85 
AF000197-4|AAB52899.1|  274|Caenorhabditis elegans Hypothetical ...    31   0.85 
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF016418-3|AAK18905.1|  210|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF039049-12|AAB94245.1|  499|Caenorhabditis elegans Cytochrome p...    28   7.9  

>Z70680-4|CAA94569.1|  274|Caenorhabditis elegans Hypothetical
           protein C25G4.6 protein.
          Length = 274

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +1

Query: 310 KKLLEELRAVLHISHDRHSAEARRVSNDELLATIAERLSGPNTGLG 447
           +K  EEL A +HI  DR     RR      LAT+    +GP  GLG
Sbjct: 81  EKKAEELEARVHIPEDRAKIIQRREGYVYELATLVWVQNGPKLGLG 126


>AF000197-4|AAB52899.1|  274|Caenorhabditis elegans Hypothetical
           protein T21G5.4 protein.
          Length = 274

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +1

Query: 310 KKLLEELRAVLHISHDRHSAEARRVSNDELLATIAERLSGPNTGLG 447
           +K  EEL A +HI  DR     RR      LAT+    +GP  GLG
Sbjct: 81  EKKAEELEARVHIPEDRAKIIQRREGYVYELATLVWVQNGPKLGLG 126


>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
            K12D12.1 protein.
          Length = 1520

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
 Frame = +2

Query: 461  AEEKCLYYHVALPKQCTLK*QTKQPRQPLLKMLKFKRGFRARKLV---APKTNEEEIXS- 628
            A  K  Y  ++ PK+  +K + K+P++P  K +K K G   +K +   APKT ++E    
Sbjct: 1281 AATKAKYEKMSQPKKERVKKEPKEPKEP--KKVK-KEGQDIKKFMSPAAPKTAKKEKSDG 1337

Query: 629  -VEGQTAESGLSSNEGMD-ESNYPPVAMED 712
                 + ES +  +EG+D +S+   V  ED
Sbjct: 1338 FNSDMSEESDVEFDEGIDFDSDDDGVERED 1367


>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
            K12D12.1 protein.
          Length = 1520

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
 Frame = +2

Query: 461  AEEKCLYYHVALPKQCTLK*QTKQPRQPLLKMLKFKRGFRARKLV---APKTNEEEIXS- 628
            A  K  Y  ++ PK+  +K + K+P++P  K +K K G   +K +   APKT ++E    
Sbjct: 1281 AATKAKYEKMSQPKKERVKKEPKEPKEP--KKVK-KEGQDIKKFMSPAAPKTAKKEKSDG 1337

Query: 629  -VEGQTAESGLSSNEGMD-ESNYPPVAMED 712
                 + ES +  +EG+D +S+   V  ED
Sbjct: 1338 FNSDMSEESDVEFDEGIDFDSDDDGVERED 1367


>AF016418-3|AAK18905.1|  210|Caenorhabditis elegans Hypothetical
           protein C49G7.10 protein.
          Length = 210

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 130 PYLKYSIGKISILFTSNDNSFILTLQKKIKS*GFPIVSR 14
           PY+KYS+ K     T ND +++  +QK+ +     ++ R
Sbjct: 12  PYVKYSLNKKKRWETGNDKNYLSEVQKRYRGMDMFVIDR 50


>AF039049-12|AAB94245.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 35B3 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +2

Query: 212 ATSVVSRFGDSNWKPTRI*SVCLEHKGLXKTTEKNY----WKNYAPC-YT*ATIGTVPRH 376
           AT++VS F      P  +   C E   + K TE  Y     K+ A   Y  ATI  + RH
Sbjct: 314 ATTLVSGFNQLVNNP-EVMRKCREE--IMKITENGYRPLQLKDRAETHYLNATIAEIQRH 370

Query: 377 AACLTTNYW 403
           A+ L  N+W
Sbjct: 371 ASILNVNFW 379


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,194,886
Number of Sequences: 27780
Number of extensions: 374756
Number of successful extensions: 935
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)