Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_J01
(891 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 98 3e-19
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 77 8e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 70 9e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 43 0.009
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.34
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 36 1.4
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 35 2.4
UniRef50_Q8N985 Cluster: CDNA FLJ38229 fis, clone FCBBF2004256; ... 34 4.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.6
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 34 5.6
UniRef50_Q188S7 Cluster: ABC transporter, permease protein precu... 33 9.8
UniRef50_Q5K8T9 Cluster: Centromeric protein e (Cenp-e protein),... 33 9.8
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 97.9 bits (233), Expect = 3e-19
Identities = 58/98 (59%), Positives = 63/98 (64%)
Frame = +3
Query: 381 VCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRPGTVK 560
+C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE---I 77
Query: 561 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRR 674
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RR
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRR 115
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 76.6 bits (180), Expect = 8e-13
Identities = 49/108 (45%), Positives = 52/108 (48%)
Frame = +3
Query: 537 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRSXXXXXXXXXXXXX 716
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRR
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 717 XXXTGYLSAFLPSGKRGAFSXXPXXGISXRXXSFPPNLGFXHXPPVXP 860
F + F GIS R SF P+ PP P
Sbjct: 62 CRLPDTCPPF-SLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Score = 56.4 bits (130), Expect = 9e-07
Identities = 31/66 (46%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 691 LXAPSCX---DPCRLPDTCPPFSLRXSVXXSHXXPX*VSXFGXXXSXPTWAXXTNPPXXP 861
L APSC PCRLPDTCPPFSLR + +S P+WA TNPP P
Sbjct: 50 LEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGIS-VRCRSFAPSWAVCTNPPFSP 108
Query: 862 TXXPXP 879
T P P
Sbjct: 109 TAAPYP 114
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 69.7 bits (163), Expect = 9e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +3
Query: 555 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRR 674
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRR
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRR 83
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 545 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 432
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 345 CINESANARGXAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 512
CI + A AR AV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 464 HSKAVIRLSTESGDNAGKNM 523
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 43.2 bits (97), Expect = 0.009
Identities = 28/74 (37%), Positives = 33/74 (44%)
Frame = +1
Query: 658 IKIPGVPPXSSLXAPSCXDPCRLPDTCPPFSLRXSVXXSHXXPX*VSXFGXXXSXPTWAX 837
+KI V S A SC +P PPFSL SV SH +S + P+WA
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFA-PSWAV 90
Query: 838 XTNPPXXPTXXPXP 879
NPP PT P P
Sbjct: 91 SKNPPFSPTAAPYP 104
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 39.5 bits (88), Expect = 0.11
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 444 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 617
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 618 IDAQVRGGETRQDYKDT 668
I Q + +T+ +YK T
Sbjct: 82 IYPQFKNTQTQHNYKYT 98
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3
Query: 415 ERGSGRAPNTQTAXPRALADSLMQ 344
+R + APNTQTA PRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 343 SALMNRPTXGXRRFAYW 393
+ALMNRPT G RRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 157 MIRYIDEFGQTTTXMQ 204
MIRYIDEFGQTTT MQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_Q8N985 Cluster: CDNA FLJ38229 fis, clone FCBBF2004256;
n=2; Homo sapiens|Rep: CDNA FLJ38229 fis, clone
FCBBF2004256 - Homo sapiens (Human)
Length = 153
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +1
Query: 670 GVPPXSSLXAPSCXDPCRLPDTCPPFSLRXSVXXSHXXPX*VSXF 804
G PP S L A C CPP SL SV SH P S F
Sbjct: 27 GFPPASPLCACECPLSAHPLSLCPPVSLSSSVSPSHALPLSFSLF 71
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 554 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 432
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.9 bits (74), Expect = 5.6
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -2
Query: 764 TLXRREKGGQ--VSGKRXGSXQEGAXRELXGGTPGIFIVLSGFATSDLSVDFCDARQGGG 591
TL + GG+ + G GS Q + G +P + GFA+ + +F +A GG
Sbjct: 564 TLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGS 623
Query: 590 AYGKTPATRPFYGSWP 543
+ +P + P Y S P
Sbjct: 624 SVPPSPYSTPSYLSVP 639
>UniRef50_Q188S7 Cluster: ABC transporter, permease protein
precursor; n=3; Clostridium difficile|Rep: ABC
transporter, permease protein precursor - Clostridium
difficile (strain 630)
Length = 822
Score = 33.1 bits (72), Expect = 9.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 628 KSEVAKPDRTIKIPGVPPXSSLXAPSCXDPCRLPDTCPPFS 750
K+E+A + T+K+ G+ P + P D L DT PP++
Sbjct: 128 KNEIALDENTLKLMGIKPRLGVTIPMNLDISLLNDTIPPYN 168
>UniRef50_Q5K8T9 Cluster: Centromeric protein e (Cenp-e protein),
putative; n=1; Filobasidiella neoformans|Rep:
Centromeric protein e (Cenp-e protein), putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1801
Score = 33.1 bits (72), Expect = 9.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 616 KSTLKSEVAKPDRTIKIPGVPPXSSLXAPSCXDPCRLP 729
KSTL + + P + +P P S++ APS P +LP
Sbjct: 7 KSTLSRQPSSPSLAVGLPPALPESNIMAPSTTSPSKLP 44
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,143,048
Number of Sequences: 1657284
Number of extensions: 11069558
Number of successful extensions: 27138
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 26144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27120
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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