Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_I22
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical pr...    72   6e-13
Z54216-1|CAA90943.1|  308|Caenorhabditis elegans Hypothetical pr...    42   8e-04
AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical ...    38   0.013
AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical ...    30   2.6  
Z81047-10|CAB02836.1|  215|Caenorhabditis elegans Hypothetical p...    29   5.9  

>Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical
           protein C15H11.8 protein.
          Length = 119

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
 Frame = +1

Query: 277 ISVITNENILHTDGPEGP-----VVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 441
           +  I    +  TDG E       VV+  C KCG+ + SY+T+Q RSADEGQTVFYTC+KC
Sbjct: 52  VEKIYERTVADTDGIENDESADAVVDHICTKCGHSKASYSTMQTRSADEGQTVFYTCLKC 111

Query: 442 KYKETENS 465
           K K+ E S
Sbjct: 112 KKKDIEYS 119


>Z54216-1|CAA90943.1|  308|Caenorhabditis elegans Hypothetical
           protein T24H10.1 protein.
          Length = 308

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 343 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 441
           KC KCG    +Y  LQ RS+DE  T F  C++C
Sbjct: 269 KCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLEC 301


>AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical
           protein Y77E11A.6 protein.
          Length = 108

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 331 VVERKCAKCGYDRMSYATLQLRSADEGQTVFYTC 432
           V +  C  C + R  +  LQ RSADE  T+FY C
Sbjct: 64  VTDETCPVCSHGRAYFMQLQTRSADEPSTIFYRC 97


>AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.5 protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +1

Query: 337 ERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIK--CKYKETE 459
           E +C  CG  +  +   Q + A+E   ++Y C    C+++ TE
Sbjct: 125 EHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVCASQDCQHRWTE 167


>Z81047-10|CAB02836.1|  215|Caenorhabditis elegans Hypothetical
           protein C41G6.12 protein.
          Length = 215

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 279 YSIEMYCVLKFHFTIIISLIMCFTSVAFHRSQTLVARVIWTHSEHKTLYLV 127
           YSI MYC +K HF   +  ++   S+A    Q  + R +   S   T++LV
Sbjct: 120 YSIIMYCGIKMHFN--MQKMLARFSMAQQNIQKQLLRALVAQSIGPTIFLV 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,870,698
Number of Sequences: 27780
Number of extensions: 337344
Number of successful extensions: 849
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)