Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_I19
         (1090 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...    63   2e-09
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...    63   2e-09
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...    63   2e-09
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...    63   2e-09
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...    57   1e-07

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 62.9 bits (146), Expect = 2e-09
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           KGKLP QPVIVKAKFFS+ AE KIK VGGACVL A
Sbjct: 114 KGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score = 62.9 bits (146), Expect = 2e-09
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           KGKLP QPVIVKAKFFS+ AE KIK VGGACVL A
Sbjct: 113 KGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 147


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 62.9 bits (146), Expect = 2e-09
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           KGKLP QPVIVKAKFFS+ AE KIK VGGACVL A
Sbjct: 114 KGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score = 62.9 bits (146), Expect = 2e-09
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           KGKLP QPVIVKAKFFS+ AE KIK VGGACVL A
Sbjct: 114 KGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score = 57.2 bits (132), Expect = 1e-07
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           KGKL  QPVIVKAK FS+ AE KIK VGGACVL A
Sbjct: 114 KGKLAKQPVIVKAKLFSRRAEEKIKSVGGACVLVA 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,421,172
Number of Sequences: 237096
Number of extensions: 651684
Number of successful extensions: 534
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14981781346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)