Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_I19
         (1090 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.      54   3e-07
U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal prot...    54   3e-07
AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p pro...    54   3e-07
AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA...    54   3e-07
X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal prot...    52   1e-06

>U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.
          Length = 149

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           +G LP +PVIVKAK+FSK AE KIKK GG C+L+A
Sbjct: 115 RGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149


>U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal protein
           RpL27a protein.
          Length = 149

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           +G LP +PVIVKAK+FSK AE KIKK GG C+L+A
Sbjct: 115 RGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149


>AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p
           protein.
          Length = 149

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           +G LP +PVIVKAK+FSK AE KIKK GG C+L+A
Sbjct: 115 RGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149


>AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA
           protein.
          Length = 149

 Score = 54.0 bits (124), Expect = 3e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           +G LP +PVIVKAK+FSK AE KIKK GG C+L+A
Sbjct: 115 RGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149


>X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal protein
           L27a protein.
          Length = 149

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = -1

Query: 226 KGKLPNQPVIVKAKFFSKTAERKIKKVGGACVLTA 122
           +G LP +PVIVKAK+FSK AE KIK+ GG C+L+A
Sbjct: 115 RGHLPARPVIVKAKYFSKKAEDKIKEAGGVCLLSA 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,629,403
Number of Sequences: 53049
Number of extensions: 181602
Number of successful extensions: 145
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5637618504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)