Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_I18
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0032 + 19432305-19432510,19433390-19434326,19434880-194349...    31   0.91 
11_03_0155 + 10871512-10871949,10874414-10874695,10874782-108749...    30   2.1  
04_01_0025 - 348326-348566,349750-350912                               30   2.8  
01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952...    29   3.7  

>11_06_0032 +
           19432305-19432510,19433390-19434326,19434880-19434975,
           19435518-19435654,19435888-19436056
          Length = 514

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
 Frame = +3

Query: 189 VPTYLRPVQYLILILNLCFLAKEIFQACQDWSAYIRQW------ENWLQWLIIIGVFLCT 350
           +P  + P+    + ++L +L   +  + Q    YIR W      +NW+  +I +G+F  T
Sbjct: 206 LPGRMAPLMKFYVFMSLAYLLVMVVWSSQ----YIRFWRDIMPIQNWITLIIALGLFEMT 261

Query: 351 IPYWDVDN----GVLRTNTTNWQHDVAAI 425
           + Y++  N    GV     T W   V AI
Sbjct: 262 LWYFEYLNFNSSGVRPIGITTWVVTVGAI 290


>11_03_0155 +
           10871512-10871949,10874414-10874695,10874782-10874951,
           10875068-10875165,10875775-10877135
          Length = 782

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = -1

Query: 692 VQLL*NISSYSSSPDIIMTVLTKPGX*MECGVVAEQHAKG*TKSNEETTVRQEECGKIHR 513
           V ++ +   Y+ +P+  + V  K G  M CG   +QHA   T + ++  + +E+  K  +
Sbjct: 306 VAIMRDAQRYTQTPEDAVAVALKAGLDMNCGTYMQQHA---TAAIQQGKLTEEDIDKALK 362

Query: 512 N 510
           N
Sbjct: 363 N 363


>04_01_0025 - 348326-348566,349750-350912
          Length = 467

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 423 ITIFFCWLELMMIIGRFPTFGL-YVQMFTTVTVNFATFLLAYSCLLIAFGLAFSVL 587
           I++F+C   L  ++G    F L Y +     +VN AT++   + +L+  GLA  +L
Sbjct: 150 ISLFWCLFNLGGVLGGLLPFSLNYHRAADAASVNDATYIAFMAFMLLGAGLALLLL 205


>01_06_0919 -
           32993752-32993856,32994383-32994592,32994666-32995220,
           32995705-32995926,32996381-32996511,32997456-32998353,
           32998453-32998530,32998612-32998683,32998728-32998763,
           32999413-33000353,33000531-33000659,33000751-33000894,
           33000994-33001060,33002434-33002502,33003144-33003278
          Length = 1263

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 22/65 (33%), Positives = 30/65 (46%)
 Frame = +2

Query: 332 RSVFVYDTVLGRRQWGFKNKHNELAARRGCNYHIFLLAGTDDDHRKVSYFRSLRPDVYYS 511
           +S+  Y T + R  WG + K      RR C     +    +D +   SYFR LR D Y  
Sbjct: 770 QSIKNYRTQVARACWGLRAK------RRWCLSGTPIQNAVEDLY---SYFRFLRYDPYAE 820

Query: 512 YGEFC 526
           Y +FC
Sbjct: 821 YKKFC 825


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,548,516
Number of Sequences: 37544
Number of extensions: 441662
Number of successful extensions: 918
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)