Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_I18
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y10601-1|CAA71610.1| 1119|Homo sapiens ankyrin-like protein prot... 52 4e-06
BT009800-1|AAP88802.1| 340|Homo sapiens guanine nucleotide bind... 31 5.5
BC002454-1|AAH02454.1| 340|Homo sapiens guanine nucleotide bind... 31 5.5
BC000115-1|AAH00115.1| 340|Homo sapiens guanine nucleotide bind... 31 5.5
BC029778-1|AAH29778.2| 283|Homo sapiens forkhead box I1 protein. 31 7.2
AY707089-1|AAU12169.1| 256|Homo sapiens FOXI1 protein protein. 31 7.2
U56813-1|AAC50933.1| 608|Homo sapiens polycystwin protein. 30 9.5
U50928-1|AAC50520.1| 968|Homo sapiens PKD2 protein. 30 9.5
BC112263-1|AAI12264.1| 968|Homo sapiens polycystin 2 protein. 30 9.5
BC112261-1|AAI12262.1| 968|Homo sapiens polycystin 2 protein. 30 9.5
AF004873-1|AAC16004.1| 968|Homo sapiens autosomal dominant poly... 30 9.5
>Y10601-1|CAA71610.1| 1119|Homo sapiens ankyrin-like protein protein.
Length = 1119
Score = 51.6 bits (118), Expect = 4e-06
Identities = 32/139 (23%), Positives = 60/139 (43%)
Frame = +3
Query: 201 LRPVQYLILILNLCFLAKEIFQACQDWSAYIRQWENWLQWLIIIGVFLCTIPYWDVDNGV 380
++ L+ + ++ KE Q Q Y N L+W+I + +P +
Sbjct: 770 IKTCMILVFLSSIFGYCKEAGQIFQQKRNYFMDISNVLEWIIYTTGIIFVLPLFVEIPAH 829
Query: 381 LRTNTTNWQHDVAAITIFFCWLELMMIIGRFPTFGLYVQMFTTVTVNFATFLLAYSCLLI 560
L+ WQ AI ++F W+ ++ + RF G+++ M + + + LL+
Sbjct: 830 LQ-----WQ--CGAIAVYFYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFIFLLL 882
Query: 561 AFGLAFSVLFSNYPAFHLP 617
AFGL+F +L + F P
Sbjct: 883 AFGLSFYILLNLQDPFSSP 901
>BT009800-1|AAP88802.1| 340|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 3 protein.
Length = 340
Score = 31.1 bits (67), Expect = 5.5
Identities = 27/103 (26%), Positives = 41/103 (39%)
Frame = +3
Query: 321 LIIIGVFLCTIPYWDVDNGVLRTNTTNWQHDVAAITIFFCWLELMMIIGRFPTFGLYVQM 500
L I G + WDV G R T + D+ AI FF E + + L+
Sbjct: 198 LFISGACDASAKLWDVREGTCRQTFTGHESDINAIC-FFPNGEAICTGSDDASCRLFDLR 256
Query: 501 FTTVTVNFATFLLAYSCLLIAFGLAFSVLFSNYPAFHLPAWFS 629
+ F+ + S +AF L+ +LF+ Y F+ W S
Sbjct: 257 ADQELICFSHESIICSITSVAFSLSGRLLFAGYDDFNCNVWDS 299
>BC002454-1|AAH02454.1| 340|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 3 protein.
Length = 340
Score = 31.1 bits (67), Expect = 5.5
Identities = 27/103 (26%), Positives = 41/103 (39%)
Frame = +3
Query: 321 LIIIGVFLCTIPYWDVDNGVLRTNTTNWQHDVAAITIFFCWLELMMIIGRFPTFGLYVQM 500
L I G + WDV G R T + D+ AI FF E + + L+
Sbjct: 198 LFISGACDASAKLWDVREGTCRQTFTGHESDINAIC-FFPNGEAICTGSDDASCRLFDLR 256
Query: 501 FTTVTVNFATFLLAYSCLLIAFGLAFSVLFSNYPAFHLPAWFS 629
+ F+ + S +AF L+ +LF+ Y F+ W S
Sbjct: 257 ADQELICFSHESIICSITSVAFSLSGRLLFAGYDDFNCNVWDS 299
>BC000115-1|AAH00115.1| 340|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 3 protein.
Length = 340
Score = 31.1 bits (67), Expect = 5.5
Identities = 27/103 (26%), Positives = 41/103 (39%)
Frame = +3
Query: 321 LIIIGVFLCTIPYWDVDNGVLRTNTTNWQHDVAAITIFFCWLELMMIIGRFPTFGLYVQM 500
L I G + WDV G R T + D+ AI FF E + + L+
Sbjct: 198 LFISGACDASAKLWDVREGTCRQTFTGHESDINAIC-FFPNGEAICTGSDDASCRLFDLR 256
Query: 501 FTTVTVNFATFLLAYSCLLIAFGLAFSVLFSNYPAFHLPAWFS 629
+ F+ + S +AF L+ +LF+ Y F+ W S
Sbjct: 257 ADQELICFSHESIICSITSVAFSLSGRLLFAGYDDFNCNVWDS 299
>BC029778-1|AAH29778.2| 283|Homo sapiens forkhead box I1 protein.
Length = 283
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 872 RDELSXCLTHPXDPIQHPLVTPGYH*QPNQXVXFVNITVTSSTNIRNI 729
RDE P HPLVTPG +P+ ++T S + + N+
Sbjct: 186 RDEDDPAYVSGGSPTSHPLVTPGLSPEPSDKTGQNSLTFNSFSPLTNL 233
>AY707089-1|AAU12169.1| 256|Homo sapiens FOXI1 protein protein.
Length = 256
Score = 30.7 bits (66), Expect = 7.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 872 RDELSXCLTHPXDPIQHPLVTPGYH*QPNQXVXFVNITVTSSTNIRNI 729
RDE P HPLVTPG +P+ ++T S + + N+
Sbjct: 159 RDEDDPAYVSGGSPTSHPLVTPGLSPEPSDKTGQNSLTFNSFSPLTNL 206
>U56813-1|AAC50933.1| 608|Homo sapiens polycystwin protein.
Length = 608
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 402 WQ---HDVAAITIFFCWLELMMIIGRFPTFGLYVQMFTTVTVNFATFLLAYSCLLIAFGL 572
WQ +++AA+T+FF W++L +F F + +T A L ++ + L
Sbjct: 194 WQIQFNNIAAVTVFFVWIKLF----KFINFNRTMSQLSTTMSRCAKDLFGFAIMFFIIFL 249
Query: 573 AFSVL 587
A++ L
Sbjct: 250 AYAQL 254
>U50928-1|AAC50520.1| 968|Homo sapiens PKD2 protein.
Length = 968
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 402 WQ---HDVAAITIFFCWLELMMIIGRFPTFGLYVQMFTTVTVNFATFLLAYSCLLIAFGL 572
WQ +++AA+T+FF W++L +F F + +T A L ++ + L
Sbjct: 554 WQIQFNNIAAVTVFFVWIKLF----KFINFNRTMSQLSTTMSRCAKDLFGFAIMFFIIFL 609
Query: 573 AFSVL 587
A++ L
Sbjct: 610 AYAQL 614
>BC112263-1|AAI12264.1| 968|Homo sapiens polycystin 2 protein.
Length = 968
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 402 WQ---HDVAAITIFFCWLELMMIIGRFPTFGLYVQMFTTVTVNFATFLLAYSCLLIAFGL 572
WQ +++AA+T+FF W++L +F F + +T A L ++ + L
Sbjct: 554 WQIQFNNIAAVTVFFVWIKLF----KFINFNRTMSQLSTTMSRCAKDLFGFAIMFFIIFL 609
Query: 573 AFSVL 587
A++ L
Sbjct: 610 AYAQL 614
>BC112261-1|AAI12262.1| 968|Homo sapiens polycystin 2 protein.
Length = 968
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 402 WQ---HDVAAITIFFCWLELMMIIGRFPTFGLYVQMFTTVTVNFATFLLAYSCLLIAFGL 572
WQ +++AA+T+FF W++L +F F + +T A L ++ + L
Sbjct: 554 WQIQFNNIAAVTVFFVWIKLF----KFINFNRTMSQLSTTMSRCAKDLFGFAIMFFIIFL 609
Query: 573 AFSVL 587
A++ L
Sbjct: 610 AYAQL 614
>AF004873-1|AAC16004.1| 968|Homo sapiens autosomal dominant
polycystic kidney disease type II protein protein.
Length = 968
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 402 WQ---HDVAAITIFFCWLELMMIIGRFPTFGLYVQMFTTVTVNFATFLLAYSCLLIAFGL 572
WQ +++AA+T+FF W++L +F F + +T A L ++ + L
Sbjct: 554 WQIQFNNIAAVTVFFVWIKLF----KFINFNRTMSQLSTTMSRCAKDLFGFAIMFFIIFL 609
Query: 573 AFSVL 587
A++ L
Sbjct: 610 AYAQL 614
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,716,702
Number of Sequences: 237096
Number of extensions: 2567618
Number of successful extensions: 5956
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5956
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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