Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_I18
         (872 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   1.2  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    24   2.1  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   6.4  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   6.4  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   6.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   8.5  

>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 444 LELMMIIGRFPTFGLYVQMFTTVTVNFATFLLAYSCLLIAFG 569
           LEL+ +   FP   +  ++ + +T+N  T +LA S  +I  G
Sbjct: 30  LELINLENFFPEENVVEELLSPLTLNRITHILANSPAIIILG 71


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 631 KTVMMMSGELEYEDIFYNNCTNSEIYY 711
           K +  +S    Y + +YNN    ++YY
Sbjct: 302 KIISSLSNSCNYSNNYYNNNNYKKLYY 328


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 428 GNCSHVVLPVRCVCS*NPIV 369
           G+CSH+ LP   + S +P++
Sbjct: 41  GHCSHLCLPAPRINSKSPLL 60


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 428 GNCSHVVLPVRCVCS*NPIV 369
           G+CSH+ LP   + S +P++
Sbjct: 41  GHCSHLCLPAPRINSKSPLL 60


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 631 KTVMMMSGELEYEDIFYNNCTNSEIYY 711
           K +  +S +  + +  YNN  N ++YY
Sbjct: 302 KIISSLSNKTIHNNNNYNNYNNKKLYY 328


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -1

Query: 458 HHQFQPTEKYGNCSHVVLPVRCVCS*NPIVYV 363
           HH   P E  G     +L   C C+ N ++ +
Sbjct: 464 HHHPHPPETPGPQVETILQNACFCARNELMMI 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,256
Number of Sequences: 438
Number of extensions: 5074
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)