Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_I16
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces p... 148 1e-36
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 130 3e-31
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 27 2.6
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 27 4.6
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 26 6.1
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 26 6.1
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 26 8.1
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 26 8.1
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 26 8.1
>SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 289
Score = 148 bits (358), Expect = 1e-36
Identities = 66/113 (58%), Positives = 81/113 (71%)
Frame = +2
Query: 185 YIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISL 364
Y E G+ T DY+V+ + G PIS HDIPL+A+ + ++NMVVE+PRWT AK+EI+
Sbjct: 4 YTTREVGALNTLDYQVYVEKNGTPISSWHDIPLYANAEKTILNMVVEIPRWTQAKLEITK 63
Query: 365 GEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPEHGREG 523
LNPIKQD KKG LRFV N FPH GYIWNYGA PQT+E+PN V PE +G
Sbjct: 64 EATLNPIKQDTKKGKLRFVRNCFPHHGYIWNYGAFPQTYEDPNVVHPETKAKG 116
Score = 115 bits (277), Expect = 8e-27
Identities = 54/99 (54%), Positives = 65/99 (65%)
Frame = +3
Query: 510 TGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLN 689
T A+GD+DP+DV EIGE G V VK+LG +AL+DEGETDWK+I ID DP A KLN
Sbjct: 112 TKAKGDSDPLDVCEIGEARGYTGQVKQVKVLGVMALLDEGETDWKVIVIDVNDPLAPKLN 171
Query: 690 DVQDVETLSXXXXXXXXXXXXLYKVPDGKPVNKFAFDGE 806
D++DVE +YK+PDGKP N FAF GE
Sbjct: 172 DIEDVERHMPGLIRATNEWFRIYKIPDGKPENSFAFSGE 210
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 130 bits (313), Expect = 3e-31
Identities = 61/122 (50%), Positives = 78/122 (63%)
Frame = +2
Query: 158 ATLKTQVRMYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRW 337
A+L + + + G TPD+RV+ PIS HD+PL +DK NMV E+PRW
Sbjct: 2 ASLAKNILQFRSKITGKLNTPDFRVYCYKNNKPISFFHDVPLTSDKDT--FNMVTEIPRW 59
Query: 338 TNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPEHGR 517
T AK EISL +PIKQD+K G LR+V N FP+ G+IWNYGALPQTWE+PN +D
Sbjct: 60 TQAKCEISLTSPFHPIKQDLKNGKLRYVANSFPYHGFIWNYGALPQTWEDPNVIDSRTKM 119
Query: 518 EG 523
+G
Sbjct: 120 KG 121
Score = 111 bits (266), Expect = 2e-25
Identities = 50/104 (48%), Positives = 65/104 (62%)
Frame = +3
Query: 510 TGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLN 689
T +GD DP+DV EIG + G + VK+LG L LID+GETDWK++AID DP A+ LN
Sbjct: 117 TKMKGDGDPLDVCEIGGSIGYIGQIKQVKVLGALGLIDQGETDWKILAIDINDPRAKLLN 176
Query: 690 DVQDVETLSXXXXXXXXXXXXLYKVPDGKPVNKFAFDGEAXTQS 821
D+ DV+ L +YK+PDGKP N+F FDG +S
Sbjct: 177 DISDVQNLMPRLLPCTRDWFAIYKIPDGKPKNRFFFDGNYLPKS 220
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 95 IARRLCAVKEPTRVTCSINSTATLKTQVRMYIVEERGSPYTPD 223
+A R C + R C I +T K+ +YI E P T +
Sbjct: 64 LADRACETMKTLRHPCIIKYLSTYKSSTHLYIATETVRPVTTE 106
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -3
Query: 730 GGGPGDNVSTSCTSFNFSAFGSRESIAISFQSVSPSSMRASVPRIFTG*TSPRLATRSPI 551
G GPGD +++ S+F + A V+ +S++ ++PR T +S A+R+ +
Sbjct: 118 GNGPGDRSFIDDGNYSASSFERQNRTAPLQSKVTTASLKPNIPR--TSMSSSPTASRTSL 175
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 754 SLTTRRWRGGGPGDNVSTSCTSFNFSAFGSRESIAIS 644
S + + GGGP D+ S+S TS S S I+ S
Sbjct: 364 SYISSKTNGGGPSDSPSSSSTSVRGSVNDSNSPISSS 400
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 200 RGSPYTPDY--RVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEA 373
RG P T + V+ K+ GP P + + ++++V+E +WTNA + + +
Sbjct: 301 RGEPVTLENGKTVYPKEVIGPSIPGSSFFIIHCPNELVIDLVIENHKWTNAPKPVCVIHS 360
Query: 374 LNP 382
+ P
Sbjct: 361 VTP 363
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 142 TSYTCRFFNSAQSSCYRPANRNSC 71
TSY C+F NS S Y+ + N C
Sbjct: 254 TSYYCKFLNSWFSGDYQQSVENLC 277
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 762 VPDGKPVNKFAFDGE 806
+PDGKP+NK A+ E
Sbjct: 505 IPDGKPLNKIAWQPE 519
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 562 RSPISMTSTGSLSPLAPVFRVDVIRILPGLRQSA 461
+S S T + LA V VD IRI+ GL+ +A
Sbjct: 224 KSLFSATIPSRVEELAKVVTVDPIRIIVGLKDAA 257
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,168,081
Number of Sequences: 5004
Number of extensions: 64194
Number of successful extensions: 168
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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