Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_I16
(873 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0875 + 32393496-32393881,32395297-32395397,32395493-323956... 106 3e-23
05_01_0108 - 709031-709204,709294-709359,709607-709714,709822-70... 48 1e-05
04_04_1663 - 35156098-35156140,35156273-35156354,35156506-351565... 47 2e-05
05_04_0447 + 21347786-21347974,21348104-21348169,21348266-213483... 46 5e-05
01_06_1459 - 37515753-37515765,37516026-37516107,37516194-375163... 45 9e-05
02_05_0448 - 29100674-29100716,29100821-29100902,29101010-291011... 44 2e-04
01_07_0363 - 43066250-43066303,43066304-43066411,43066500-430665... 34 0.17
11_04_0366 - 16832018-16832371,16832746-16834752,16835109-16835480 31 1.6
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 30 2.1
12_02_0271 + 16629099-16630325 30 2.8
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 30 2.8
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 3.7
12_02_0400 + 18618845-18619747,18620889-18621257 29 6.4
10_02_0009 + 4128909-4130123 29 6.4
05_05_0132 - 22611030-22611908,22612016-22612135,22612644-226128... 29 6.4
02_01_0791 - 5930553-5930802,5931042-5932351 29 6.4
01_05_0541 - 23078460-23078597,23078745-23078903,23079264-230793... 29 6.4
07_01_0004 + 35300-35533,35617-35732,39044-39287,39451-40578,406... 28 8.5
>02_05_0875 +
32393496-32393881,32395297-32395397,32395493-32395674,
32396135-32396233,32396311-32396403
Length = 286
Score = 106 bits (254), Expect = 3e-23
Identities = 52/93 (55%), Positives = 60/93 (64%)
Frame = +3
Query: 513 GARGDNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLND 692
GA GDNDPVDV+EIGER A+ GDV VK L LA+IDEGE DWK++AI DP A +ND
Sbjct: 155 GAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMIDEGELDWKIVAISLDDPKASLVND 214
Query: 693 VQDVETLSXXXXXXXXXXXXLYKVPDGKPVNKF 791
V DVE YK+PDGKP N+F
Sbjct: 215 VDDVEKHFPGTLTAIRDWFRDYKIPDGKPANRF 247
Score = 101 bits (243), Expect = 6e-22
Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
Frame = +2
Query: 89 RSIARRLCAVKEPTRVTCSINSTATLKT-QVRMYIVEERGSPYTPDYRVFFKDEGG-PIS 262
R AR AV+ RV + +TA L+T ++R +E+G P T DYRVF D GG +S
Sbjct: 24 RRTARLPTAVRFQRRV---LATTALLRTAELRP---KEQGLPETLDYRVFLVDGGGRKVS 77
Query: 263 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 442
P HD+PL A + + VVE+P+ ++AKME++ E+ PIKQD KKGNLR+ +P+
Sbjct: 78 PWHDVPLRAGDG--VFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRY----YPY- 130
Query: 443 GYIWNYGALPQTWENP 490
WNYG PQTWE+P
Sbjct: 131 NINWNYGLFPQTWEDP 146
>05_01_0108 -
709031-709204,709294-709359,709607-709714,709822-709887,
710125-710153,710239-710374
Length = 192
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +3
Query: 525 DNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDV 704
D+DP+DV+ I + G K +G + +ID+GE D K+IA+ + DP + ND++++
Sbjct: 102 DSDPLDVLVIMQEPVIPGCFLRAKAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKEL 161
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +2
Query: 263 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 442
P HD+ + A + N V+E+PR + K E+ L + + + + V+PH
Sbjct: 39 PWHDLEI-GPGAPTIFNCVIEIPRGSKVKYELDKKTGL------IVVDRVLYSSVVYPH- 90
Query: 443 GYIWNYGALPQT 478
NYG +P+T
Sbjct: 91 ----NYGFIPRT 98
>04_04_1663 -
35156098-35156140,35156273-35156354,35156506-35156575,
35156682-35156747,35156976-35157083,35157328-35157393,
35158451-35158479,35158566-35158692
Length = 196
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 525 DNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDV 695
DNDP+DV+ + + G + +G + +ID+GE D K+IA+ + DP ND+
Sbjct: 99 DNDPMDVLVLMQEPVIPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI 155
>05_04_0447 +
21347786-21347974,21348104-21348169,21348266-21348373,
21348469-21348534,21348662-21348782,21348880-21348961,
21349052-21349094
Length = 224
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +3
Query: 525 DNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDV 704
DNDP+DV+ + + G + +G + +ID+GE D K+IA+ + DP N++ ++
Sbjct: 110 DNDPMDVLVLMQEPVLPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFNNLSEL 169
>01_06_1459 -
37515753-37515765,37516026-37516107,37516194-37516314,
37516407-37516472,37516558-37516665,37516755-37516820,
37516920-37516948,37517095-37517221
Length = 203
Score = 44.8 bits (101), Expect = 9e-05
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +3
Query: 525 DNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDV 704
DNDP+DV+ + + G + +G + +ID+GE D K+IA+ DP ND+ ++
Sbjct: 99 DNDPMDVLVLMQEPVIPGCFLRARAIGLMPMIDQGEKDDKIIAVCVDDPEYRHYNDLSEL 158
>02_05_0448 -
29100674-29100716,29100821-29100902,29101010-29101130,
29101481-29101546,29101628-29101735,29102083-29102148,
29102605-29102633,29102773-29102902
Length = 214
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +3
Query: 525 DNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDV 704
D DP+DV+ + + G + +G + +ID+GE D K+IA+ + DP D++++
Sbjct: 100 DGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHFRDIKEI 159
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 263 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 442
P HD+ + A + N VVE+PR + K E+ L +K + + + V+PH
Sbjct: 37 PWHDLEI-GPGAPAVFNCVVEIPRGSKVKYELDKATGL------IKVDRVLYSSVVYPH- 88
Query: 443 GYIWNYGALPQT 478
NYG +P+T
Sbjct: 89 ----NYGFIPRT 96
>01_07_0363 -
43066250-43066303,43066304-43066411,43066500-43066565,
43066787-43066815,43066993-43067131
Length = 131
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 263 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 442
P HD+ + +A + N V+E+PR + K E+ L VK + + + V+PH
Sbjct: 40 PWHDLEI-GPEAPTIFNCVIEIPRGSKVKYELDKKTGL------VKVDRVLYSSVVYPH- 91
Query: 443 GYIWNYGALPQT 478
NYG +P+T
Sbjct: 92 ----NYGFIPRT 99
>11_04_0366 - 16832018-16832371,16832746-16834752,16835109-16835480
Length = 910
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 519 RGDNDPVDVIEIGERVASRGDVYP--VKILGTLALIDEGETDWKLIAIDSRDPNAEK 683
+G P +++EIG R+A + P +K LG++ + E W+ + +DS N E+
Sbjct: 373 QGSGIPSNLVEIGRRIAEKCKGLPLAIKTLGSILRFETNEKKWRDV-LDSELWNLEQ 428
>08_02_1453 - 27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 543 VIEIGERVAS--RGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLS 716
++ IG R+ RG +K +G L + ++W++IA + + NDV D+ LS
Sbjct: 1226 LVSIGTRIVKKCRGVPLALKTMGGLMSSKQSVSEWEVIAESNIGARVQGKNDVMDILKLS 1285
>12_02_0271 + 16629099-16630325
Length = 408
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 567 ASRGDVYPVKILG-TLALIDEGETDWKLIAIDSRDPNAEKLND 692
AS G V +I+ T +L+D+GE DW ++ + +D KL D
Sbjct: 342 ASMGKVGRARIVHRTYSLVDDGEDDW-VVMVKKQDRQVYKLRD 383
>01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 263 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNL 412
P D W +A+RL+ + T+ K E LG L K+D +KGNL
Sbjct: 893 PYCDNDFWPGEAERLLEKKDDD---TSQKKETQLGRLLRVAKRDDRKGNL 939
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.5 bits (63), Expect = 3.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 721 PGDNVSTSCTSFN-FSAFGSRESIAISFQSVSPSSMRASVPRIFTG*----TSPRLATRS 557
PG TS + +N S F S S +S SPS + S+P T TSP + S
Sbjct: 1601 PGPGSFTSSSPYNPVSPFYSPAS-PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSS 1659
Query: 556 PISMTSTGSLSPLAPVF 506
PI ++ S SP +PV+
Sbjct: 1660 PIYSPTSLSYSPTSPVY 1676
>12_02_0400 + 18618845-18619747,18620889-18621257
Length = 423
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -3
Query: 826 KRLCVXASPSNANLFTGLPSGTL*SLTTRRWRGGGPGDNVSTS 698
KR P+ A +F L G L + W GGG GD VS S
Sbjct: 63 KRSVDSGRPATARVFDDLAGGGLGG-SREIWNGGGGGDGVSGS 104
>10_02_0009 + 4128909-4130123
Length = 404
Score = 28.7 bits (61), Expect = 6.4
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 6/164 (3%)
Frame = -3
Query: 730 GGGPGDNVSTSCTSFNFS-AFGSRESIAISFQSVSPSSMRAS--VP-RIFTG*TSPRLAT 563
GG G N++ + G S A+ +S PSS+ S P R+ TS +
Sbjct: 22 GGKVGSNIAVVLLLVSLGFVLGLTSSNAMFLKSFYPSSLMPSSMAPLRLVLSSTSTSPSP 81
Query: 562 RSPISMTSTGSLSPLAPVFRVDVIRILPGLRQSAVIPDVAAMREDVVHEPKVAFLYVLLD 383
SP AP+ + + ++++ P D V KVAF++++
Sbjct: 82 PSPPPPPPPPPPQQPAPMHSMGDEELF---WRASMAPKSRRRLPDGVVPKKVAFMFLVRG 138
Query: 382 RIEGLPEADLHFRIGPSRYF--YYHVDEALSFVGP*WNVVHGRY 257
+ P + F + ++ Y H + SF G +V HGRY
Sbjct: 139 ELPLRPLWEKFFEGQRTDHYSIYVHAHPSYSFTGSPESVFHGRY 182
>05_05_0132 -
22611030-22611908,22612016-22612135,22612644-22612856,
22612968-22613288,22613421-22613504
Length = 538
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 262 AHARHSTMGRQSSTPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQRLPSS 441
A R + G + PR+ G R + + RG + + R+ R+P R + +
Sbjct: 378 AELRAARGGERQPGPRREGRRRPPLAAAHDEPAVRGAAEEAEPRRRRRRPGERRRGAADA 437
Query: 442 RLHLE 456
LH +
Sbjct: 438 ELHAD 442
>02_01_0791 - 5930553-5930802,5931042-5932351
Length = 519
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 452 RCSRDEGRRCSRTEGCLS 399
RCSRD RCSR GC +
Sbjct: 118 RCSRDAFMRCSRLAGCFT 135
>01_05_0541 -
23078460-23078597,23078745-23078903,23079264-23079386,
23079839-23080363,23081240-23081421,23084977-23085072,
23085290-23085485
Length = 472
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 522 GDNDPVDVIEIGERVASRGDVYPVKILGTLALIDE 626
G N+P D ++I S + YP+ + G A+ DE
Sbjct: 103 GMNEPNDTLQIFSLKLSSNESYPISVYGIFAVRDE 137
>07_01_0004 +
35300-35533,35617-35732,39044-39287,39451-40578,
40657-40833
Length = 632
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 850 RGPRQRLCKRLCVXASPSNANLFTGLPS--GTL*SLTTRRWRGGGPGDNVSTSCT 692
R R+ L + + S SN L LP+ + + R+ G PGD +S+SC+
Sbjct: 538 RSARETLMRLIASTPSASNPQLVNILPAVLTDVPEMNVRKHLGVHPGDRLSSSCS 592
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,715,343
Number of Sequences: 37544
Number of extensions: 463750
Number of successful extensions: 1316
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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