Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_I16
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical pr... 168 4e-42
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 168 4e-42
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 168 4e-42
Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical pr... 168 4e-42
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 30 1.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 29 3.3
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 4.3
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical
protein C47E12.4d protein.
Length = 292
Score = 168 bits (409), Expect = 4e-42
Identities = 72/114 (63%), Positives = 91/114 (79%)
Frame = +2
Query: 182 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 361
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 10 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 69
Query: 362 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPEHGREG 523
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV P+ G +G
Sbjct: 70 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKG 123
Score = 134 bits (324), Expect = 8e-32
Identities = 61/100 (61%), Positives = 74/100 (74%)
Frame = +3
Query: 507 NTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKL 686
+TGA+GDNDP+DVIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D NA+KL
Sbjct: 118 DTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKL 177
Query: 687 NDVQDVETLSXXXXXXXXXXXXLYKVPDGKPVNKFAFDGE 806
ND+ DVE + YK+P GKP N+FAF+GE
Sbjct: 178 NDIDDVEKVYPGLLAASVEWFRNYKIPAGKPANEFAFNGE 217
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 724 LLRATVEWSGSTKFRMASR*ISSRLMAKLXRR-VAYKVVDEVHXFWKSLI 870
LL A+VEW + K + R A KV+DE + +WK+LI
Sbjct: 190 LLAASVEWFRNYKIPAGKPANEFAFNGEFKNREYAEKVIDETNEYWKTLI 239
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 168 bits (409), Expect = 4e-42
Identities = 72/114 (63%), Positives = 91/114 (79%)
Frame = +2
Query: 182 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 361
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 124 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 183
Query: 362 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPEHGREG 523
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV P+ G +G
Sbjct: 184 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKG 237
Score = 134 bits (324), Expect = 8e-32
Identities = 61/100 (61%), Positives = 74/100 (74%)
Frame = +3
Query: 507 NTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKL 686
+TGA+GDNDP+DVIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D NA+KL
Sbjct: 232 DTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKL 291
Query: 687 NDVQDVETLSXXXXXXXXXXXXLYKVPDGKPVNKFAFDGE 806
ND+ DVE + YK+P GKP N+FAF+GE
Sbjct: 292 NDIDDVEKVYPGLLAASVEWFRNYKIPAGKPANEFAFNGE 331
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 724 LLRATVEWSGSTKFRMASR*ISSRLMAKLXRR-VAYKVVDEVHXFWKSLI 870
LL A+VEW + K + R A KV+DE + +WK+LI
Sbjct: 304 LLAASVEWFRNYKIPAGKPANEFAFNGEFKNREYAEKVIDETNEYWKTLI 353
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 168 bits (409), Expect = 4e-42
Identities = 72/114 (63%), Positives = 91/114 (79%)
Frame = +2
Query: 182 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 361
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 125 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 184
Query: 362 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPEHGREG 523
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV P+ G +G
Sbjct: 185 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKG 238
Score = 134 bits (324), Expect = 8e-32
Identities = 61/100 (61%), Positives = 74/100 (74%)
Frame = +3
Query: 507 NTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKL 686
+TGA+GDNDP+DVIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D NA+KL
Sbjct: 233 DTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKL 292
Query: 687 NDVQDVETLSXXXXXXXXXXXXLYKVPDGKPVNKFAFDGE 806
ND+ DVE + YK+P GKP N+FAF+GE
Sbjct: 293 NDIDDVEKVYPGLLAASVEWFRNYKIPAGKPANEFAFNGE 332
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 724 LLRATVEWSGSTKFRMASR*ISSRLMAKLXRR-VAYKVVDEVHXFWKSLI 870
LL A+VEW + K + R A KV+DE + +WK+LI
Sbjct: 305 LLAASVEWFRNYKIPAGKPANEFAFNGEFKNREYAEKVIDETNEYWKTLI 354
>Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical
protein C47E12.4a protein.
Length = 338
Score = 168 bits (409), Expect = 4e-42
Identities = 72/114 (63%), Positives = 91/114 (79%)
Frame = +2
Query: 182 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 361
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 56 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 115
Query: 362 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPEHGREG 523
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV P+ G +G
Sbjct: 116 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKG 169
Score = 134 bits (324), Expect = 8e-32
Identities = 61/100 (61%), Positives = 74/100 (74%)
Frame = +3
Query: 507 NTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKL 686
+TGA+GDNDP+DVIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D NA+KL
Sbjct: 164 DTGAKGDNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKL 223
Query: 687 NDVQDVETLSXXXXXXXXXXXXLYKVPDGKPVNKFAFDGE 806
ND+ DVE + YK+P GKP N+FAF+GE
Sbjct: 224 NDIDDVEKVYPGLLAASVEWFRNYKIPAGKPANEFAFNGE 263
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 724 LLRATVEWSGSTKFRMASR*ISSRLMAKLXRR-VAYKVVDEVHXFWKSLI 870
LL A+VEW + K + R A KV+DE + +WK+LI
Sbjct: 236 LLAASVEWFRNYKIPAGKPANEFAFNGEFKNREYAEKVIDETNEYWKTLI 285
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 346 ENGDQPRGGPQSYQAGRKERQPSVREQRLPSSRLHLELRRSAADLGE 486
+N D GGP + + GRK++ S E S LH EL++ + L E
Sbjct: 83 KNSDGGAGGPPA-KRGRKKKAKSESEDEAESDHLHDELKKCLSILKE 128
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = -3
Query: 730 GGGPGDNVSTSCTSFNFSAFGSRESIAISFQSVSPSSMRASVPRIFTG*TSPRLATRSPI 551
G N S S + A S S + S+SPS ++S G TSP ++T S
Sbjct: 1089 GSSTSPNPSQSTSPSTSGATSSPGSSGTTLTSISPSPSQSSTIGSSQGSTSPVVSTTSG- 1147
Query: 550 SMTSTGS 530
MTS GS
Sbjct: 1148 DMTSQGS 1154
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 425 NVFPHRGYIWNYGALPQTWE-NPNHVDPE 508
N +P GYIWNY Q WE +P++V PE
Sbjct: 401 NAYP--GYIWNYET--QEWEYDPSYVAPE 425
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 247 RRSYIAHARHSTMGRQSSTPRQHGSRST*MDQCENG--DQPRGGPQSYQAGRKERQPSVR 420
RRS R S M R +P H RS M +G + P GGP ++ + R P+ R
Sbjct: 227 RRSPPPRDRMSPMRRGGRSPPPHRRRSP-MGGRGSGANNMPLGGPNRFRRASRSRSPAGR 285
Query: 421 EQR 429
R
Sbjct: 286 RSR 288
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -3
Query: 709 VSTSCTSFNFSAFGSRESIAISFQSVSPSSMRASVPRIFTG*TSPRLATRSPISMTSTGS 530
V T+CT +A + +I+ + S S ++ PRI T + T P+S T S
Sbjct: 100 VWTNCTETTSTA-STEFTISSTSLKTSTSDSTSTEPRISTTTDTKDTTTEDPVSSTDQSS 158
Query: 529 LSP 521
SP
Sbjct: 159 TSP 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,840,357
Number of Sequences: 27780
Number of extensions: 375992
Number of successful extensions: 949
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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