Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_I14
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 108 2e-22
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 89 2e-16
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 81 5e-14
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 47 7e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 42 0.015
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.046
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.081
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 34 5.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.3
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.3
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 34 5.3
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 108 bits (260), Expect = 2e-22
Identities = 64/108 (59%), Positives = 69/108 (63%)
Frame = +2
Query: 314 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 493
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 494 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 637
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL AP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAP 121
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 88.6 bits (210), Expect = 2e-16
Identities = 52/103 (50%), Positives = 54/103 (52%)
Frame = +2
Query: 482 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPLVRSPVPT 661
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 662 LPLXRILSAFLPSGSVALXHXXXXXXXXXXXXXAPXWAVCXXP 790
L F + AP WAVC P
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
Score = 68.1 bits (159), Expect = 3e-10
Identities = 35/75 (46%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 624 PWKLPSCALLFRPCRXTGYCPPFSLREAWRXFIAHXVGTXFGV-GRPXQXGLCAXXPXXP 800
P + PSCALLFRPCR CPPFSLREAWR IAH VG +C P P
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Query: 801 DRXXLXGXIXXSPXR 845
I SP R
Sbjct: 109 TAAPYPVTIVLSPTR 123
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 80.6 bits (190), Expect = 5e-14
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +2
Query: 500 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 637
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL AP
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 490 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 377
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 290 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 457
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 389 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 562
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 563 IDAQVRGGETRQDYKDTRRFPLEAP 637
I Q + +T+ +YK T FPL++P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSP 106
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 46.8 bits (106), Expect = 7e-04
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 641 VRSPVPTLPLXRILSAFLPSGSVALXH 721
+RSPVPTLPL LSAFLPSGSVAL H
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSH 27
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 93 DPDMIRYIDEFGQTTTRMQ 149
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 409 HSKAVIRLSTESGDNAGKNM 468
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 42.3 bits (95), Expect = 0.015
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -2
Query: 790 GXXAHSPXWXGRPTPX*VPTX*AMXKR-HASRREKGGQYPVKRQGRNRRAHEGSFQGETP 614
G A+SP W RP P + + K + +K Q KRQGRNRRAHEG+ ++P
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSP 86
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.046
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 288 SALMNRPTRGERRFAYW 338
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.081
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 360 ERGSGRAPNTQTASPRALADSLMQ 289
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 33.9 bits (74), Expect = 5.3
Identities = 27/73 (36%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +2
Query: 575 VRGGETRQDYKDTRRFPLEAPLVRSPVPTLPLXRI-LSAFLPSGSVALXHXXXXXXXXXX 751
VR GETRQD K PL S + RI + F +GSVAL H
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALS-CSNPAVSRIPVPPFSLAGSVALSHSSHSGISARC 81
Query: 752 XXXAPXWAVCXXP 790
AP WAV P
Sbjct: 82 RSFAPSWAVSKNP 94
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 499 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 377
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 171 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 338
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -1
Query: 206 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTFKS 39
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P+ +S
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSVRS 544
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.3
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 251 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 87
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,205,474
Number of Sequences: 1657284
Number of extensions: 14286442
Number of successful extensions: 39911
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 38212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39893
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -