Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_I13
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476...    30   2.1  
06_03_0493 + 21402536-21404599                                         29   6.4  

>08_02_0733 +
           20546072-20546325,20546924-20547017,20547441-20547624,
           20547722-20547831,20548328-20548423,20548525-20548679,
           20548743-20548986,20549159-20549314,20549600-20549829,
           20552213-20552316,20552420-20552505,20552776-20553066,
           20553383-20553475,20553640-20553735,20553838-20553939,
           20554196-20554266,20554784-20555035,20555786-20556529,
           20557038-20557119,20557192-20557347,20557446-20557655,
           20558282-20558665
          Length = 1397

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 567 LRITRTLPSDGLSSCGCYAVRRTSSGMCATTITDWSYWRXTFAE*AGDQSS 719
           L ++ TLP D   +   YA+ R +     +  T WSY R   +  AG  SS
Sbjct: 238 LLVSTTLPPDDTLNLYTYAILRLTPRALLSNATSWSYLRKGTSVHAGPTSS 288


>06_03_0493 + 21402536-21404599
          Length = 687

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 592 DGNVRVIRRRWLQQRVRGPVLNELLKNCRCSNSC 491
           +G VR   + + Q RVRG  LNE    C    +C
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTC 339


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,850,760
Number of Sequences: 37544
Number of extensions: 398128
Number of successful extensions: 743
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)