Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_I08
(878 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 122 1e-26
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 115 1e-24
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 91 5e-17
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 55 2e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 51 4e-05
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_A3ZR73 Cluster: Periplasmic glucan biosynthesis protein... 36 1.8
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 33 9.6
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 122 bits (294), Expect = 1e-26
Identities = 72/124 (58%), Positives = 79/124 (63%)
Frame = +1
Query: 322 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 501
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 502 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLESSSCALLFRPCRLP 681
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL + SCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Query: 682 DTVR 693
+ R
Sbjct: 134 VSFR 137
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 115 bits (277), Expect = 1e-24
Identities = 58/75 (77%), Positives = 60/75 (80%)
Frame = +1
Query: 490 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLESSSCALLFRP 669
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLE+ SCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 670 CRLPDTVRLSPFGKR 714
CRLPDT PF R
Sbjct: 62 CRLPDT--CPPFSLR 74
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/37 (67%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 719 FLIAHAVGISXRXRSFAPXWAVCXT-PVXPDGXPXPV 826
FLIAHAVGIS R RSFAP WAVC P P P PV
Sbjct: 79 FLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPV 115
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 90.6 bits (215), Expect = 5e-17
Identities = 43/54 (79%), Positives = 46/54 (85%)
Frame = +1
Query: 508 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLESSSCALLFRP 669
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL + SCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 498 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 385
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 298 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 465
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 56.0 bits (129), Expect = 1e-06
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 397 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 570
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 571 IDAQVRGGETRQDYKDTRRFPLESSSCALLFRP 669
I Q + +T+ +YK T FPL+S S +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/74 (47%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 611 IKIPGVSPWKAPRALSCSDPAAYRI-LSAFLPSGSVXFLIAHAVGISXRXRSFAPXWAVC 787
+KI VS P ALSCS+PA RI + F +GSV + GIS R RSFAP WAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 788 XT-PVXPDGXPXPV 826
P P P PV
Sbjct: 92 KNPPFSPTAAPYPV 105
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -1
Query: 716 PRFPKGER-RTVSGKRQGRNRRAHEELSRGKRLVSL*SCRVSPPLT 582
PRFPKG++ VSGKRQGRNRRAHE + K SL PPLT
Sbjct: 54 PRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
Score = 42.3 bits (95), Expect = 0.016
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 823 RXRXTVGXNGGXAXSPXWSERPTPX*DTYSVSYEKXHASRREKGGQYPVSGRVGTGERTR 644
+ R + G A SP WSERP P DT SVSYEK + K + R G R
Sbjct: 18 KGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAH 77
Query: 643 SFPGG-NAWYLYSPVG 599
G + SPVG
Sbjct: 78 EGAAGEKSPASLSPVG 93
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 417 HSKAVIRLSTESGDNAGKNM 476
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 224 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 346
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 368 ERGSGRAPNTQTASPRALADSLMQ 297
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A3ZR73 Cluster: Periplasmic glucan biosynthesis protein,
MdoG; n=1; Blastopirellula marina DSM 3645|Rep:
Periplasmic glucan biosynthesis protein, MdoG -
Blastopirellula marina DSM 3645
Length = 500
Score = 35.5 bits (78), Expect = 1.8
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +1
Query: 538 IGSAPLTSI-TKIDAQV--RGGETRQDYKDTRRFPLESSSCALLFRPCRLPDTVRLSPF 705
+G AP+TS+ T D Q G E R + D+ ES + LFRP R PD RLS F
Sbjct: 256 LGVAPITSMWTWGDGQSPPEGQEFRPEVHDSDGLLAESVTGEWLFRPVRNPDATRLSAF 314
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 507 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 385
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.1 bits (72), Expect = 9.6
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -3
Query: 669 GSEQESARGAFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 496
GS+Q S+ G++P + GFA+ + +F +A GG + +P + P Y S P
Sbjct: 582 GSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,023,806
Number of Sequences: 1657284
Number of extensions: 15113386
Number of successful extensions: 40464
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 38837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40449
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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