Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_I05
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0025 - 25165438-25165708,25165807-25166048,25166191-251662...   130   1e-30
12_01_0284 + 2117288-2117509                                          127   1e-29
11_01_0276 + 2057486-2057707                                          127   1e-29
08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137           31   1.6  
02_02_0240 + 8196140-8198248,8198381-8198650                           30   2.1  
01_07_0384 + 43209423-43210241                                         29   6.5  
10_08_0361 + 17207657-17207701,17208850-17209773                       28   8.6  

>02_05_0025 -
           25165438-25165708,25165807-25166048,25166191-25166222,
           25167174-25167231,25167331-25167438
          Length = 236

 Score =  130 bits (315), Expect = 1e-30
 Identities = 56/74 (75%), Positives = 66/74 (89%)
 Frame = +2

Query: 152 SKMLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLA 331
           ++M+EV  NDRLGKKVRVKCN DDT+GDLKKL+AAQTGTR +KI ++KWY ++KDHI LA
Sbjct: 162 AEMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLA 221

Query: 332 DYEIHDGMNLELYY 373
           DYEIHDGM LELYY
Sbjct: 222 DYEIHDGMGLELYY 235


>12_01_0284 + 2117288-2117509
          Length = 73

 Score =  127 bits (307), Expect = 1e-29
 Identities = 55/72 (76%), Positives = 63/72 (87%)
 Frame = +2

Query: 158 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADY 337
           M+EV  NDRLGKKVRVKCN DDT+GDLKKL+AAQTGTR +KI ++KWY ++KDHI L DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHITLRDY 60

Query: 338 EIHDGMNLELYY 373
           EIHDGM LELYY
Sbjct: 61  EIHDGMGLELYY 72


>11_01_0276 + 2057486-2057707
          Length = 73

 Score =  127 bits (307), Expect = 1e-29
 Identities = 55/72 (76%), Positives = 63/72 (87%)
 Frame = +2

Query: 158 MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADY 337
           M+EV  NDRLGKKVRVKCN DDT+GDLKKL+AAQTGTR +KI ++KWY ++KDHI L DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHITLKDY 60

Query: 338 EIHDGMNLELYY 373
           EIHDGM LELYY
Sbjct: 61  EIHDGMGLELYY 72


>08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137
          Length = 174

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
 Frame = +2

Query: 161 LEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKD----HIKL 328
           +++      G  + ++  P DT+ D+K  I  + G R D+  L       K        L
Sbjct: 92  MQIIVKTLTGITITLEVRPSDTIDDVKAKIQDKVGIRSDQQHLVDVSAGSKQLDDGGSTL 151

Query: 329 ADYEIHDGMNLEL 367
           ADY+IHD   L L
Sbjct: 152 ADYDIHDESTLHL 164


>02_02_0240 + 8196140-8198248,8198381-8198650
          Length = 792

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 221 DTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADYEIHDGMNLEL 367
           DTVG LK+ IA +     +K  L    +  KD++ LA Y I  G+ + L
Sbjct: 734 DTVGSLKEQIAGELQLPANKQKLSVRTSFLKDNLTLAYYNIGPGVVINL 782


>01_07_0384 + 43209423-43210241
          Length = 272

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 288 STILSYLVPVCAAINFFKSPTVSSGLHLTRTFLPSRSLHVTSSILL 151
           ST  SY     A+IN     ++++G H TR  L S S   TSS  L
Sbjct: 216 STSTSYTGTSSASINMTTMISLNNGFHSTRPVLASASTTPTSSSFL 261


>10_08_0361 + 17207657-17207701,17208850-17209773
          Length = 322

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +2

Query: 182 RLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADYEIHDGMNL 361
           ++ K   +  N  DTV  +K  ++A  G    K  +       K+  KLADY I    ++
Sbjct: 19  KMMKTFTLNVNSTDTVDQIKSKLSAIEGIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSV 78

Query: 362 ELY 370
           +LY
Sbjct: 79  DLY 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,880,763
Number of Sequences: 37544
Number of extensions: 263290
Number of successful extensions: 501
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)