Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_I03
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 174 9e-44
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 172 3e-43
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 171 5e-43
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 166 2e-41
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 89 6e-18
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 76 4e-14
06_03_1514 + 30696632-30696724,30696857-30697009,30697226-306973... 29 3.8
01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964... 29 3.8
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 28 8.7
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 8.7
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 174 bits (423), Expect = 9e-44
Identities = 73/129 (56%), Positives = 96/129 (74%)
Frame = +1
Query: 334 KFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGP 513
K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETPY IMFGPDICG
Sbjct: 97 KYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICGY 156
Query: 514 GTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXAD 693
TKKVH I + GKNHLIKKD+ CK D TH+YTLI++PD Y +LIDN + ++G + D
Sbjct: 157 ATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYDD 216
Query: 694 WDFLPPKKQ 720
W+ +PPK +
Sbjct: 217 WNIIPPKNK 225
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 12/71 (16%)
Frame = +3
Query: 153 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGSK 296
+VFF+EKF DD WE WV SE G++ T+GK++ D +D G +
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 297 TSEDARFYALS 329
TSED RFYA+S
Sbjct: 85 TSEDYRFYAIS 95
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 172 bits (419), Expect = 3e-43
Identities = 69/128 (53%), Positives = 98/128 (76%)
Frame = +1
Query: 334 KFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGP 513
K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGPDICG
Sbjct: 88 KIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDICGT 147
Query: 514 GTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXAD 693
TKK+H+I SY+G+N+ IKKD++C+ D TH+YT I++PD +Y +L+DN + ESG + D
Sbjct: 148 QTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMYTD 207
Query: 694 WDFLPPKK 717
WD LPP+K
Sbjct: 208 WDILPPRK 215
Score = 58.8 bits (136), Expect = 5e-09
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +3
Query: 153 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGSKTSEDARFYAL 326
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG +T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 327 S 329
S
Sbjct: 86 S 86
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 171 bits (417), Expect = 5e-43
Identities = 73/128 (57%), Positives = 95/128 (74%)
Frame = +1
Query: 334 KFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGP 513
++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPDICG
Sbjct: 90 EYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICGY 149
Query: 514 GTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXAD 693
TKKVH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +LIDN + +SG +
Sbjct: 150 STKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEH 209
Query: 694 WDFLPPKK 717
WD LPPK+
Sbjct: 210 WDILPPKQ 217
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = +3
Query: 153 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGSKTSEDARFYAL 326
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG +TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAI 87
Query: 327 S 329
S
Sbjct: 88 S 88
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 166 bits (403), Expect = 2e-41
Identities = 68/128 (53%), Positives = 94/128 (73%)
Frame = +1
Query: 334 KFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGP 513
KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGPDICG
Sbjct: 88 KFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGPDICGD 147
Query: 514 GTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXAD 693
TKK+H+I SY+G+N+ IKKD++C+ D TH YT I++PD +Y +L+DN + E G + D
Sbjct: 148 QTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFGSMYTD 207
Query: 694 WDFLPPKK 717
WD LPP+K
Sbjct: 208 WDILPPRK 215
Score = 56.0 bits (129), Expect = 4e-08
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = +3
Query: 144 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGSKTSEDARF 317
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G +T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 318 YALS 329
+A+S
Sbjct: 83 FAIS 86
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 88.6 bits (210), Expect = 6e-18
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Frame = +1
Query: 340 KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICG 510
+P + + +V+QF V+ + ++CGG YLK D + K+ ETPY IMFGPD CG
Sbjct: 81 EPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKCG 140
Query: 511 PGTKKVHVIFSYK----GK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVE 672
T KVH I +K GK H +K D +H+YT I+KPDN +L+D E+ +
Sbjct: 141 -STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKK 199
Query: 673 SGDLXADWDFLP 708
+ + DF P
Sbjct: 200 KANFLSADDFEP 211
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 75.8 bits (178), Expect = 4e-14
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +1
Query: 550 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXADWDFLPPKKQ 720
G NHLIKKD+ C+ D TH+YTLI++PD Y +LIDN + +G + D D LPPKK+
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPPKKK 571
>06_03_1514 +
30696632-30696724,30696857-30697009,30697226-30697309,
30697451-30697569,30697769-30697870,30699071-30699190,
30699285-30699350,30699563-30699629,30699720-30699773,
30700379-30700534,30701130-30701228
Length = 370
Score = 29.5 bits (63), Expect = 3.8
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Frame = -1
Query: 624 HNQSVQMCVDIIFAADIFFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS-LSVHVLLL 448
HN + M V I ++ D M + ++Y +L NV HNL WS ++H+L
Sbjct: 88 HNALLAMAVGISQMQNV--DIMARKFLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILAR 145
Query: 447 Q-----FAVKDLEVSASTV-NVLFMFDSELDYQGF 361
FA + L + +F++D +L F
Sbjct: 146 NQTKWWFAKRFLHPDVVAIYGFIFLWDEDLGVDNF 180
>01_07_0383 -
43195095-43195322,43195408-43195638,43196134-43196454,
43196512-43196589,43196664-43197727,43197813-43198503,
43198743-43199541,43200010-43200158,43200159-43200286,
43200389-43200494,43200835-43200843,43201332-43201821,
43201896-43202554,43203759-43203851,43204044-43204196,
43205092-43205194,43205376-43205467,43206229-43206306,
43206987-43207049,43207339-43207512
Length = 1902
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Frame = -3
Query: 292 EPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHE----SSGNFSSKNTS-----QFIE 140
+P S F A + FP ++ C+++ + S +G + SK S QF+E
Sbjct: 359 DPSCHSSMWDAFLAFSRRFPEAWSYCNIHKVVFSRFWHFLQNGCYGSKQASYPLLVQFLE 418
Query: 139 DNASKLTTTKYNSFHFRFTVPPSSNKRQ 56
SK TT+ F F + N+RQ
Sbjct: 419 SIPSKAVTTEQFVFDFLHNLWAGRNQRQ 446
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -1
Query: 660 IVNEDFIGVVRFHNQSVQMCVDI 592
+V EDF+ + F +Q+V +C+D+
Sbjct: 353 LVEEDFVQIAEFLHQAVTICLDV 375
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 503 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 360
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,758,373
Number of Sequences: 37544
Number of extensions: 431927
Number of successful extensions: 1102
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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