Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_I02
         (909 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    27   0.79 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   7.3  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    24   7.3  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.7  

>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 27.1 bits (57), Expect = 0.79
 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
 Frame = +3

Query: 423 PPPPTFTQETM---PXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGA 569
           PPPPT T  T+   P            P T  +  PP    P  PH P  GA
Sbjct: 245 PPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTSE--PPSTPHPTDPHCPPTGA 294


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 7/35 (20%)
 Frame = +3

Query: 525 GASMPGAPHPPDMGAWN-------QMSLPPPPGSA 608
           G  +P  P PP   + N        +  PPPPGSA
Sbjct: 592 GLGLPQVPQPPAGSSLNLSHPSAGMVPQPPPPGSA 626


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 595 LQDLPQS*RNCLLRSRAKKMPLSKQKCGIKKQLYXN 702
           LQD+P+  +  +  S AK   L++QK  ++ +L  N
Sbjct: 416 LQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTAN 451


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +3

Query: 39  CGRXXCXXLXTFAXERFVGYYELPVHNCXTKE 134
           CG   C  + TF  ERF    +   H C  KE
Sbjct: 40  CGHLDCTRVATFKGERFCTLCDTR-HFCECKE 70


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 605 RSWRWWKRHLIPRS 564
           R WRW +RHL+  S
Sbjct: 8   RWWRWRRRHLLTGS 21


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,801
Number of Sequences: 2352
Number of extensions: 16194
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)