Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_I02
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 35 0.070
AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 35 0.070
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 35 0.070
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.21
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 33 0.21
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.28
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.28
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.28
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.86
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.86
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.86
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.5
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.5
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.0
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 30 2.6
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 2.6
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 30 2.6
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 29 3.5
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 29 3.5
AF067219-15|AAC17023.2| 802|Caenorhabditis elegans Hypothetical... 29 3.5
Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.6
Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical pr... 29 6.1
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 6.1
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 6.1
Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 8.0
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 28 8.0
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 28 8.0
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 35.1 bits (77), Expect = 0.070
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Frame = +3
Query: 336 DENILSEISKLPEPNELWDNQFQDG-GYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYD 512
+E +L + + +++NQ++ +P PPPP +E G Y
Sbjct: 104 EEEVLETVYSPEADDVMFENQYRRPVRHPLPPPPPIMEEEPKDLPPGWEKHEDPQGYSYY 163
Query: 513 DFPPGASMPGAPHPPDMGAWNQMSLPPP-----PGSAPVIKELSIEEQSKKDAAIETEMR 677
++ P PP + Q PPP P PVI+E + ++ + K + EM
Sbjct: 164 WHVDSGTIQRQP-PPPVNRETQADAPPPQIIQLPPQQPVIEEHAFKQTTTKRRIEQDEMS 222
Query: 678 HQK 686
++
Sbjct: 223 ERE 225
>AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform c protein.
Length = 554
Score = 35.1 bits (77), Expect = 0.070
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Frame = +3
Query: 336 DENILSEISKLPEPNELWDNQFQDG-GYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYD 512
+E +L + + +++NQ++ +P PPPP +E G Y
Sbjct: 81 EEEVLETVYSPEADDVMFENQYRRPVRHPLPPPPPIMEEEPKDLPPGWEKHEDPQGYSYY 140
Query: 513 DFPPGASMPGAPHPPDMGAWNQMSLPPP-----PGSAPVIKELSIEEQSKKDAAIETEMR 677
++ P PP + Q PPP P PVI+E + ++ + K + EM
Sbjct: 141 WHVDSGTIQRQP-PPPVNRETQADAPPPQIIQLPPQQPVIEEHAFKQTTTKRRIEQDEMS 199
Query: 678 HQK 686
++
Sbjct: 200 ERE 202
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 35.1 bits (77), Expect = 0.070
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Frame = +3
Query: 336 DENILSEISKLPEPNELWDNQFQDG-GYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYD 512
+E +L + + +++NQ++ +P PPPP +E G Y
Sbjct: 192 EEEVLETVYSPEADDVMFENQYRRPVRHPLPPPPPIMEEEPKDLPPGWEKHEDPQGYSYY 251
Query: 513 DFPPGASMPGAPHPPDMGAWNQMSLPPP-----PGSAPVIKELSIEEQSKKDAAIETEMR 677
++ P PP + Q PPP P PVI+E + ++ + K + EM
Sbjct: 252 WHVDSGTIQRQP-PPPVNRETQADAPPPQIIQLPPQQPVIEEHAFKQTTTKRRIEQDEMS 310
Query: 678 HQK 686
++
Sbjct: 311 ERE 313
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Frame = +3
Query: 420 APPPPTFTQETM--PXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGAWNQMSLPP 593
APPPP T+ P P T PP + +P P P A S PP
Sbjct: 433 APPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPN-PSPSPQPAEVSKSPPP 491
Query: 594 PPGSAPVIKELSIEEQSKKDAAIETEM 674
PP P+ S+ A+E E+
Sbjct: 492 PPPLPPIATPSSVPPPPPPPPALEQEI 518
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/85 (25%), Positives = 33/85 (38%)
Frame = +3
Query: 405 DGGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGAWNQMS 584
+G P+PPP + T P P + + P A+ P +P P
Sbjct: 1411 EGAVPSPPPSSSRFSTPPVSPVSSC-----PSSRFSS--PSATRPQSPDPVPAAPAENCD 1463
Query: 585 LPPPPGSAPVIKELSIEEQSKKDAA 659
LPPPP P+ E + +S +A
Sbjct: 1464 LPPPPPEPPLPGEDTPSRKSSSSSA 1488
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.28
Identities = 28/94 (29%), Positives = 32/94 (34%), Gaps = 4/94 (4%)
Frame = +3
Query: 408 GGYPAPPPPTFTQETMPXXXXXXXXXXXXP---GTMYDDFPPGASMPGAPHPPDMGAWNQ 578
GG P PPPP P G PPG P P PP G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 579 MSLPPPPGS-APVIKELSIEEQSKKDAAIETEMR 677
PPPPG AP+ + KK ++ MR
Sbjct: 784 PPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMR 817
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.28
Identities = 28/94 (29%), Positives = 32/94 (34%), Gaps = 4/94 (4%)
Frame = +3
Query: 408 GGYPAPPPPTFTQETMPXXXXXXXXXXXXP---GTMYDDFPPGASMPGAPHPPDMGAWNQ 578
GG P PPPP P G PPG P P PP G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 579 MSLPPPPGS-APVIKELSIEEQSKKDAAIETEMR 677
PPPPG AP+ + KK ++ MR
Sbjct: 784 PPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMR 817
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.28
Identities = 28/94 (29%), Positives = 32/94 (34%), Gaps = 4/94 (4%)
Frame = +3
Query: 408 GGYPAPPPPTFTQETMPXXXXXXXXXXXXP---GTMYDDFPPGASMPGAPHPPDMGAWNQ 578
GG P PPPP P G PPG P P PP G
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 579 MSLPPPPGS-APVIKELSIEEQSKKDAAIETEMR 677
PPPPG AP+ + KK ++ MR
Sbjct: 367 PPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMR 400
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +3
Query: 411 GYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASM-PGAPHPPDMGAWNQMSL 587
GY PP Q M PP M P P PP G W
Sbjct: 242 GYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP- 300
Query: 588 PPPPGSAP 611
PPPPG P
Sbjct: 301 PPPPGRTP 308
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +3
Query: 408 GGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGAWNQMSL 587
G +P PPPP P P + + PPG P PP M M
Sbjct: 294 GMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFG--PPGMGGMPPPPPPGMRYPGGMPP 349
Query: 588 PPPP 599
PPPP
Sbjct: 350 PPPP 353
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/74 (33%), Positives = 25/74 (33%), Gaps = 9/74 (12%)
Frame = +3
Query: 417 PAPPPPTFT-----QETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGA--PHPPDM--GA 569
P PPPP T MP G M PPG PG P PP A
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 358
Query: 570 WNQMSLPPPPGSAP 611
M PPPP P
Sbjct: 359 GPGMYPPPPPSRPP 372
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +3
Query: 411 GYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASM-PGAPHPPDMGAWNQMSL 587
GY PP Q M PP M P P PP G W
Sbjct: 252 GYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP- 310
Query: 588 PPPPGSAP 611
PPPPG P
Sbjct: 311 PPPPGRTP 318
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +3
Query: 408 GGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGAWNQMSL 587
G +P PPPP P P + + PPG P PP M M
Sbjct: 304 GMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFG--PPGMGGMPPPPPPGMRYPGGMPP 359
Query: 588 PPPP 599
PPPP
Sbjct: 360 PPPP 363
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/74 (33%), Positives = 25/74 (33%), Gaps = 9/74 (12%)
Frame = +3
Query: 417 PAPPPPTFT-----QETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGA--PHPPDM--GA 569
P PPPP T MP G M PPG PG P PP A
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 368
Query: 570 WNQMSLPPPPGSAP 611
M PPPP P
Sbjct: 369 GPGMYPPPPPSRPP 382
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +3
Query: 417 PAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGAWNQMSLPPP 596
P+PPPP P TM P G +P P PP M LPPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTM-SKAPTGVPLPVPPPPPLFSP--SMILPPP 1392
Query: 597 PGSAP 611
P P
Sbjct: 1393 PPPLP 1397
Score = 29.9 bits (64), Expect = 2.6
Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Frame = +3
Query: 351 SEISKLPEP---NELWDNQFQDGGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFP 521
SE K P P N DN D P PP+ Q +MP G P
Sbjct: 1398 SEEKKNPLPTANNGHTDNGSDDIDRNVPTPPSQNQYSMPPPVMGGHEGSWRGGPPMRGMP 1457
Query: 522 PGASMPGAPHPPDMGAWN--QMSLPPP-PGSAPVIK 620
P M G PP N +PPP G P ++
Sbjct: 1458 PLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPMR 1493
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 411 GYPAPP-PPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGA-SMPGAPHPPDMGAWNQMS 584
G P PP PP + E PG PPGA PG P P + A ++
Sbjct: 154 GPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPL 213
Query: 585 LPPPPG 602
+P PG
Sbjct: 214 IPGEPG 219
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 411 GYPAPP-PPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGA-SMPGAPHPPDMGAWNQMS 584
G P PP PP + E PG PPGA PG P P + A ++
Sbjct: 154 GPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPL 213
Query: 585 LPPPPG 602
+P PG
Sbjct: 214 IPGEPG 219
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = +3
Query: 402 QDGGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGAWNQM 581
Q G P PP + P PG M FPPGA PG P P A
Sbjct: 261 QGPGMPRAFPPGASAPVAPGMPGAFPPGQGGPG-MPGSFPPGAPGPGGPGMPGSFAPGAP 319
Query: 582 SLPPPPGSAP 611
P PG P
Sbjct: 320 G-PGGPGGYP 328
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/90 (26%), Positives = 32/90 (35%)
Frame = +3
Query: 345 ILSEISKLPEPNELWDNQFQDGGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPP 524
IL +P+P+ +G P PP P +P P M PP
Sbjct: 51 ILPPGQSIPKPSFFIPPPVPNGFIPPPPGPG----GIPPPPPMFAGGIPPPPPMMGGIPP 106
Query: 525 GASMPGAPHPPDMGAWNQMSLPPPPGSAPV 614
M GAP PP + ++ PP PV
Sbjct: 107 PPPMFGAPPPPPPPSGLGVAPQPPRPKTPV 136
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 420 APPPPTFTQETM--PXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGAWNQMSLPP 593
APPPP T+ P P T PP + +P P P A S PP
Sbjct: 440 APPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPN-PSPSPQPAEVSKSPPP 498
Query: 594 PPGSAPVIKELSI 632
PP P+ S+
Sbjct: 499 PPPLPPIATPSSV 511
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 519 PPGASMPGAPHPPDMGAWNQMSLPPPP 599
PPG + + P+ A N S+PPPP
Sbjct: 270 PPGVVVAAGEYNPEAPALNNYSIPPPP 296
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Frame = +3
Query: 369 PEPNELWDNQFQDGGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMY----DDFPPGASM 536
P ++ NQ GYP PPPP PG + FPPG
Sbjct: 84 PSGPPVYHNQGPPRGYP-PPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPR 142
Query: 537 PGAPHPPDMGAWNQMSLPPPPGSAP 611
P P PP + PP AP
Sbjct: 143 PHFPGPPGPHRPPEHYPGPPRPQAP 167
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Frame = +3
Query: 336 DENILSEISKLPEPNELWDNQFQDG-GYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYD 512
+E +L + + +++NQ++ +P PPPP +E G Y
Sbjct: 222 EEEVLETVYSPEADDVMFENQYRRPVRHPLPPPPPIMEEEPKDLPPGWEKHEDPQGYSYY 281
Query: 513 DFPPGASMPGAPHPPDMGAWNQMSLPPPPGSAPV 614
++ P PP S PPP P+
Sbjct: 282 WHVDSGTIQRQPPPPVRDVTPARSPSPPPLPPPI 315
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 519 PPGASMPGAPHPPDMGAWNQMS-LPPPPGSAPVIK-ELSIEEQSKKDA-AIETEMRHQKA 689
PP GA G WNQM PPP P+ ++S +K +A A E +MR +K+
Sbjct: 266 PPKDLSLGASKVVASGLWNQMVHWNPPPSDLPIKNYQISWASSTKSEADAFEEQMR-KKS 324
Query: 690 ALSXXREE 713
L E
Sbjct: 325 TLEFAAHE 332
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 519 PPGASMPGAPHPPDMGAWNQMS-LPPPPGSAPVIK-ELSIEEQSKKDA-AIETEMRHQKA 689
PP GA G WNQM PPP P+ ++S +K +A A E +MR +K+
Sbjct: 266 PPKDLSLGASKVVASGLWNQMVHWNPPPSDLPIKNYQISWASSTKSEADAFEEQMR-KKS 324
Query: 690 ALSXXREE 713
L E
Sbjct: 325 TLEFAAHE 332
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein
F54D11.2 protein.
Length = 1145
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/89 (24%), Positives = 34/89 (38%)
Frame = +3
Query: 354 EISKLPEPNELWDNQFQDGGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGAS 533
+I+K + + + Q PPPP + T T DD P AS
Sbjct: 1026 DIAKRRKESIILSQQIAAPSISGPPPPAPSPRTEDRFLAFQNLVASTI-TTGDDMPRRAS 1084
Query: 534 MPGAPHPPDMGAWNQMSLPPPPGSAPVIK 620
M +P + G + PPPP P+++
Sbjct: 1085 MGASPRVIERGDFRD-HRPPPPPPLPILQ 1112
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 519 PPGASMPGAPHPPDMGAWNQMS-LPPPPGSAPVIK-ELSIEEQSKKDA-AIETEMRHQKA 689
PP GA G WNQM PPP P+ ++S +K +A A E +MR +K+
Sbjct: 266 PPKDLSLGASKVVASGLWNQMVHWNPPPSDLPIKNYQISWASSTKSEADAFEEQMR-KKS 324
Query: 690 ALSXXREE 713
L E
Sbjct: 325 TLEFAAHE 332
>AF067219-15|AAC17023.2| 802|Caenorhabditis elegans Hypothetical
protein R12E2.2 protein.
Length = 802
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Frame = +3
Query: 576 QMSLPPPPGSAPVI--------KELSIEEQSKKDAAIETEMRHQKAALSXXREEY 716
Q+SLPP P S P++ +EL + + SK+ AA+E + LS ++Y
Sbjct: 460 QVSLPPKPKSEPILPAGGSTNQRELVLMKLSKRIAAVELNLTLSSEYLSELSKQY 514
>Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical
protein C16D6.1 protein.
Length = 173
Score = 29.1 bits (62), Expect = 4.6
Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 9/93 (9%)
Frame = +3
Query: 360 SKLPEPNELWDNQFQDGGYPAP----PPPTFTQETMPXXXXXXXXXXXXPG-TMYDDFPP 524
S +P P + + +GG P P PPP +P PG TM P
Sbjct: 51 SVIPYPPYRHNTMWFNGGPPGPPPHGPPPPHLLHALPHPAYPPGHPLHMPGMTMMPMGPV 110
Query: 525 G----ASMPGAPHPPDMGAWNQMSLPPPPGSAP 611
G A MP P PP S+P P P
Sbjct: 111 GPPMMAGMPMRPMPPLPPMTPMGSMPHPNDGGP 143
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 308 RPAAAFVPAQTPRSSASSPKLLSIPITITAIDLSIK 201
RPA +P+ P S++++ + S+ TI AID S+K
Sbjct: 260 RPATQLIPSAPPASASTA--IASLAETIVAIDYSVK 293
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = +3
Query: 411 GYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPP-DMGAWNQMSL 587
GYP PPP P P F G + GAP PP GA S
Sbjct: 714 GYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPM--FQQGFNA-GAPPPPFGRGAGPMSSF 770
Query: 588 PPPP 599
PPPP
Sbjct: 771 PPPP 774
>Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical
protein T20F10.1 protein.
Length = 908
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +3
Query: 411 GYPAPPPPTFTQETMPXXXXXXXXXXXXPGT-MYDDFPPGASMPGAPHPPDMGAWNQMSL 587
GY PPPP + ++ P T ++ P P P+P + M+
Sbjct: 212 GYSRPPPPAY--DSSPVNTRMTPVATDNYRTHLHMKVHPVVKAP-PPNPTMLNHNKNMAP 268
Query: 588 PPPPGSAPVIKELSIEEQSKKD 653
PPPP + I ++ E+ K D
Sbjct: 269 PPPPPAKSTISIETMSEERKAD 290
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = +3
Query: 405 DGGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMP-GAPHPP-DMGAWNQ 578
D G PA P PG +D PPG P G+P P G Q
Sbjct: 207 DAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQ 266
Query: 579 MSLPPPPGSA 608
P PPG A
Sbjct: 267 AGPPGPPGQA 276
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = +3
Query: 405 DGGYPAPPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMP-GAPHPP-DMGAWNQ 578
D G PA P PG +D PPG P G+P P G Q
Sbjct: 207 DAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQ 266
Query: 579 MSLPPPPGSA 608
P PPG A
Sbjct: 267 AGPPGPPGQA 276
>Z77661-8|CAB01189.1| 438|Caenorhabditis elegans Hypothetical
protein F40G12.10 protein.
Length = 438
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 600 GSAPVIKELSIEEQSKKDAAIET 668
G AP IKE+++ +S++ AAIET
Sbjct: 363 GEAPNIKEIALSVRSQRPAAIET 385
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = +3
Query: 423 PPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGAWNQMSLPPPPG 602
P P Q ++P P ++ +F P ++ P PP + + + PPPP
Sbjct: 754 PQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
Query: 603 SAP 611
P
Sbjct: 814 PPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = +3
Query: 423 PPPPTFTQETMPXXXXXXXXXXXXPGTMYDDFPPGASMPGAPHPPDMGAWNQMSLPPPPG 602
P P Q ++P P ++ +F P ++ P PP + + + PPPP
Sbjct: 754 PQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
Query: 603 SAP 611
P
Sbjct: 814 PPP 816
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 522 PGASMPGAPHPPDM--GAWN-QMSLPPPPGSAP 611
PGA++ GAP P G++ Q +PPP SAP
Sbjct: 1181 PGAAIFGAPGAPPQHQGSFGAQFGVPPPQNSAP 1213
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 522 PGASMPGAPHPPDM--GAWN-QMSLPPPPGSAP 611
PGA++ GAP P G++ Q +PPP SAP
Sbjct: 1201 PGAAIFGAPGAPPQHQGSFGAQFGVPPPQNSAP 1233
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,869,706
Number of Sequences: 27780
Number of extensions: 381421
Number of successful extensions: 1736
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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