Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_I01
(861 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4... 130 5e-30
AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease ... 130 5e-30
AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens ... 130 5e-30
AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein. 130 5e-30
AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein. 130 5e-30
AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease ... 95 4e-19
AL158826-20|CAI12847.1| 233|Homo sapiens REX4, RNA exonuclease ... 80 1e-14
BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein. 79 2e-14
AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated e... 79 2e-14
AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens ... 79 2e-14
BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated e... 78 4e-14
BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein. 78 4e-14
BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein. 78 4e-14
AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens ... 78 4e-14
AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein SB... 78 4e-14
X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein. 71 7e-12
U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein. 71 7e-12
CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein. 71 7e-12
BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated g... 71 7e-12
BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated e... 71 7e-12
BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1... 49 3e-05
AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein. 49 3e-05
BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein. 47 1e-04
BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein. 47 1e-04
BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp prot... 47 1e-04
AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens ... 47 1e-04
AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp prot... 47 1e-04
AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product pr... 47 1e-04
BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein. 45 4e-04
BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein. 45 4e-04
AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein. 45 4e-04
AL158826-18|CAI12845.1| 189|Homo sapiens REX4, RNA exonuclease ... 42 0.004
AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein FL... 40 0.015
BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 9.4
BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 9.4
AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein. 30 9.4
AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 9.4
AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonse... 30 9.4
AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein. 30 9.4
AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense t... 30 9.4
AB209639-1|BAD92876.1| 189|Homo sapiens interferon stimulated g... 30 9.4
AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein. 30 9.4
>BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 130 bits (315), Expect = 5e-30
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N++G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L
Sbjct: 269 NQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHAL 328
Query: 692 KNDLNVLFLSHPKRNIRDTSKYKPF 766
NDL VLFL HPK+ IRDT KYKPF
Sbjct: 329 HNDLKVLFLDHPKKKIRDTQKYKPF 353
Score = 41.5 bits (93), Expect = 0.004
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSL 507
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSI 267
>AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 130 bits (315), Expect = 5e-30
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N++G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L
Sbjct: 269 NQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHAL 328
Query: 692 KNDLNVLFLSHPKRNIRDTSKYKPF 766
NDL VLFL HPK+ IRDT KYKPF
Sbjct: 329 HNDLKVLFLDHPKKKIRDTQKYKPF 353
Score = 41.5 bits (93), Expect = 0.004
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSL 507
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSI 267
>AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21840 fis, clone HEP01804. ).
Length = 422
Score = 130 bits (315), Expect = 5e-30
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N++G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L
Sbjct: 269 NQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHAL 328
Query: 692 KNDLNVLFLSHPKRNIRDTSKYKPF 766
NDL VLFL HPK+ IRDT KYKPF
Sbjct: 329 HNDLKVLFLDHPKKKIRDTQKYKPF 353
Score = 41.5 bits (93), Expect = 0.004
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSL 507
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSI 267
>AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein.
Length = 422
Score = 130 bits (315), Expect = 5e-30
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N++G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L
Sbjct: 269 NQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHAL 328
Query: 692 KNDLNVLFLSHPKRNIRDTSKYKPF 766
NDL VLFL HPK+ IRDT KYKPF
Sbjct: 329 HNDLKVLFLDHPKKKIRDTQKYKPF 353
Score = 41.5 bits (93), Expect = 0.004
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSL 507
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSI 267
>AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein.
Length = 422
Score = 130 bits (315), Expect = 5e-30
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N++G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L
Sbjct: 269 NQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHAL 328
Query: 692 KNDLNVLFLSHPKRNIRDTSKYKPF 766
NDL VLFL HPK+ IRDT KYKPF
Sbjct: 329 HNDLKVLFLDHPKKKIRDTQKYKPF 353
Score = 41.5 bits (93), Expect = 0.004
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSL 507
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+
Sbjct: 211 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSI 267
>AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 374
Score = 94.7 bits (225), Expect = 4e-19
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N++G C+YDK+VKP E V DYRT VSGIR E+L GE+ +VQKEVA++++G+ILVGH+L
Sbjct: 254 NQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEMLKGRILVGHAL 313
Query: 692 KNDL 703
NDL
Sbjct: 314 HNDL 317
Score = 41.5 bits (93), Expect = 0.004
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSL 507
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+
Sbjct: 196 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSI 252
>AL158826-20|CAI12847.1| 233|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 233
Score = 79.8 bits (188), Expect = 1e-14
Identities = 33/49 (67%), Positives = 42/49 (85%)
Frame = +2
Query: 620 EDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPF 766
E+ +VQKEVA++++G+ILVGH+L NDL VLFL HPK+ IRDT KYKPF
Sbjct: 133 EELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPF 181
>BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein.
Length = 353
Score = 79.4 bits (187), Expect = 2e-14
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N GD +YD+++ P + DYRT SGIRK+ ++N F I + ++ ++ GKI+VGH++
Sbjct: 205 NYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKIARGQILKILTGKIVVGHAI 264
Query: 692 KNDLNVLFLSHPKRNIRDTSKYKPFXK 772
ND L HPK RDTS P +
Sbjct: 265 HNDFKALQYFHPKSLTRDTSHIPPLNR 291
Score = 32.7 bits (71), Expect = 1.8
Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
Frame = +1
Query: 112 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 276
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 277 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 453
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 454 MVGIGYDGNDHMLARVSL 507
MVG G G+ LAR S+
Sbjct: 186 MVGTGPKGHVSSLARCSI 203
>AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated
exonuclease gene 20kDa-liker), member 1 (antiporter,
Na+/ protein.
Length = 353
Score = 79.4 bits (187), Expect = 2e-14
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N GD +YD+++ P + DYRT SGIRK+ ++N F I + ++ ++ GKI+VGH++
Sbjct: 205 NYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKIARGQILKILTGKIVVGHAI 264
Query: 692 KNDLNVLFLSHPKRNIRDTSKYKPFXK 772
ND L HPK RDTS P +
Sbjct: 265 HNDFKALQYFHPKSLTRDTSHIPPLNR 291
Score = 32.7 bits (71), Expect = 1.8
Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
Frame = +1
Query: 112 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 276
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 277 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 453
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 454 MVGIGYDGNDHMLARVSL 507
MVG G G+ LAR S+
Sbjct: 186 MVGTGPKGHVSSLARCSI 203
>AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ12671 fis, clone NT2RM4002323, weakly similar to
ANTIGEN GOR. ).
Length = 353
Score = 79.4 bits (187), Expect = 2e-14
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N GD +YD+++ P + DYRT SGIRK+ ++N F I + ++ ++ GKI+VGH++
Sbjct: 205 NYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKIARGQILKILTGKIVVGHAI 264
Query: 692 KNDLNVLFLSHPKRNIRDTSKYKPFXK 772
ND L HPK RDTS P +
Sbjct: 265 HNDFKALQYFHPKSLTRDTSHIPPLNR 291
Score = 32.7 bits (71), Expect = 1.8
Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
Frame = +1
Query: 112 SHKRKRTASDDHNQTVSLRGLINANWQKLLASNLLMDHKEEKQAPKEQYTGKFRR----- 276
S +K+TA+ + L +W S K + A K G+F+
Sbjct: 75 SFPKKKTAASSNGSGQPLDKKAAVSWLTPAPSK-----KADSVAAKVDLLGEFQSALPKI 129
Query: 277 NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKIT-KFIAMDCE 453
N + KS + + + N + H + N A K+ K +A+DCE
Sbjct: 130 NSHPTRSQKKSSQKKSSKKNHPQKNAPQNSTQAHSE----NKCSGASQKLPRKMVAIDCE 185
Query: 454 MVGIGYDGNDHMLARVSL 507
MVG G G+ LAR S+
Sbjct: 186 MVGTGPKGHVSSLARCSI 203
>BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated
exonuclease gene 20kDa-like 1 protein.
Length = 325
Score = 78.2 bits (184), Expect = 4e-14
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKND 700
GD +YDK+++P + DYRT SGI ++ + F + QKE+ +++GK++VGH+L ND
Sbjct: 139 GDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHND 198
Query: 701 LNVLFLSHPKRNIRDTSKYKP 763
L HP+ RDT+ Y P
Sbjct: 199 FQALKYVHPRSQTRDTT-YVP 218
Score = 30.3 bits (65), Expect = 9.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 427 TKFIAMDCEMVGIGYDGNDHMLARVSL 507
+K +A+DCEMVG G G LAR S+
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSI 134
>BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein.
Length = 209
Score = 78.2 bits (184), Expect = 4e-14
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKND 700
GD +YDK+++P + DYRT SGI ++ + F + QKE+ +++GK++VGH+L ND
Sbjct: 23 GDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHND 82
Query: 701 LNVLFLSHPKRNIRDTSKYKP 763
L HP+ RDT+ Y P
Sbjct: 83 FQALKYVHPRSQTRDTT-YVP 102
>BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein.
Length = 327
Score = 78.2 bits (184), Expect = 4e-14
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKND 700
GD +YDK+++P + DYRT SGI ++ + F + QKE+ +++GK++VGH+L ND
Sbjct: 139 GDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHND 198
Query: 701 LNVLFLSHPKRNIRDTSKYKP 763
L HP+ RDT+ Y P
Sbjct: 199 FQALKYVHPRSQTRDTT-YVP 218
Score = 30.3 bits (65), Expect = 9.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 427 TKFIAMDCEMVGIGYDGNDHMLARVSL 507
+K +A+DCEMVG G G LAR S+
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSI 134
>AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12484 fis, clone NT2RM1001102, weakly similar to
Human HEM45 mRNA. ).
Length = 209
Score = 78.2 bits (184), Expect = 4e-14
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKND 700
GD +YDK+++P + DYRT SGI ++ + F + QKE+ +++GK++VGH+L ND
Sbjct: 23 GDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHND 82
Query: 701 LNVLFLSHPKRNIRDTSKYKP 763
L HP+ RDT+ Y P
Sbjct: 83 FQALKYVHPRSQTRDTT-YVP 102
>AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein
SBBI58 protein.
Length = 325
Score = 78.2 bits (184), Expect = 4e-14
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKND 700
GD +YDK+++P + DYRT SGI ++ + F + QKE+ +++GK++VGH+L ND
Sbjct: 139 GDVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHND 198
Query: 701 LNVLFLSHPKRNIRDTSKYKP 763
L HP+ RDT+ Y P
Sbjct: 199 FQALKYVHPRSQTRDTT-YVP 218
Score = 30.3 bits (65), Expect = 9.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 427 TKFIAMDCEMVGIGYDGNDHMLARVSL 507
+K +A+DCEMVG G G LAR S+
Sbjct: 108 SKCVAIDCEMVGTGPRGRVSELARCSI 134
>X89773-1|CAA61915.2| 181|Homo sapiens isg20 protein.
Length = 181
Score = 70.5 bits (165), Expect = 7e-12
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N G +YDKF++P E+ DYRT VSG+ + ++ F++ + E+ +++GK++VGH L
Sbjct: 32 NVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGKLVVGHDL 91
Query: 692 KNDLNVLFLSHPKRNIRDTS 751
K+D L I DTS
Sbjct: 92 KHDFQALKEDMSGYTIYDTS 111
>U88964-1|AAB53416.1| 181|Homo sapiens HEM45 protein.
Length = 181
Score = 70.5 bits (165), Expect = 7e-12
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N G +YDKF++P E+ DYRT VSG+ + ++ F++ + E+ +++GK++VGH L
Sbjct: 32 NVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGKLVVGHDL 91
Query: 692 KNDLNVLFLSHPKRNIRDTS 751
K+D L I DTS
Sbjct: 92 KHDFQALKEDMSGYTIYDTS 111
>CR456942-1|CAG33223.1| 181|Homo sapiens ISG20 protein.
Length = 181
Score = 70.5 bits (165), Expect = 7e-12
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N G +YDKF++P E+ DYRT VSG+ + ++ F++ + E+ +++GK++VGH L
Sbjct: 32 NVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGKLVVGHDL 91
Query: 692 KNDLNVLFLSHPKRNIRDTS 751
K+D L I DTS
Sbjct: 92 KHDFQALKEDMSGYTIYDTS 111
>BT006952-1|AAP35598.1| 181|Homo sapiens interferon stimulated gene
20kDa protein.
Length = 181
Score = 70.5 bits (165), Expect = 7e-12
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N G +YDKF++P E+ DYRT VSG+ + ++ F++ + E+ +++GK++VGH L
Sbjct: 32 NVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGKLVVGHDL 91
Query: 692 KNDLNVLFLSHPKRNIRDTS 751
K+D L I DTS
Sbjct: 92 KHDFQALKEDMSGYTIYDTS 111
>BC007922-1|AAH07922.1| 181|Homo sapiens interferon stimulated
exonuclease gene 20kDa protein.
Length = 181
Score = 70.5 bits (165), Expect = 7e-12
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSL 691
N G +YDKF++P E+ DYRT VSG+ + ++ F++ + E+ +++GK++VGH L
Sbjct: 32 NVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLLKGKLVVGHDL 91
Query: 692 KNDLNVLFLSHPKRNIRDTS 751
K+D L I DTS
Sbjct: 92 KHDFQALKEDMSGYTIYDTS 111
>BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1
homolog (S. cerevisiae) protein.
Length = 1221
Score = 48.8 bits (111), Expect = 3e-05
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = +2
Query: 530 IYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVI-----RGKILVGHSLK 694
+YD FVKP E+ DY T SG+ + DL D S+ ++V V+ IL+GHSL+
Sbjct: 1089 VYDTFVKPDNEIVDYNTRFSGVTEADL---ADTSVTLRDVQAVLLSMFSADTILIGHSLE 1145
Query: 695 NDLNVLFLSHPKRNIRDTSKYKP 763
+DL L + H + DTS P
Sbjct: 1146 SDLLALKVIH--STVVDTSVLFP 1166
>AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein.
Length = 1239
Score = 48.8 bits (111), Expect = 3e-05
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = +2
Query: 530 IYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEVADVI-----RGKILVGHSLK 694
+YD FVKP E+ DY T SG+ + DL D S+ ++V V+ IL+GHSL+
Sbjct: 1107 VYDTFVKPDNEIVDYNTRFSGVTEADL---ADTSVTLRDVQAVLLSMFSADTILIGHSLE 1163
Query: 695 NDLNVLFLSHPKRNIRDTSKYKP 763
+DL L + H + DTS P
Sbjct: 1164 SDLLALKVIH--STVVDTSVLFP 1184
>BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein.
Length = 774
Score = 46.8 bits (106), Expect = 1e-04
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI--VQKEVADVI-RGKILVGHSL 691
G C+ D+ VKP ++ DY T SGI K+ ++N + VQ+++ ++ +LVGHSL
Sbjct: 254 GCCVMDELVKPENKILDYLTSFSGITKK-ILNPVTTKLKDVQRQLKALLPPDAVLVGHSL 312
Query: 692 KNDLNVLFLSHP 727
DL L + HP
Sbjct: 313 DLDLRALKMIHP 324
>BC016341-1|AAH16341.1| 87|Homo sapiens ISG20 protein protein.
Length = 87
Score = 46.8 bits (106), Expect = 1e-04
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 512 NKFGDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSIVQKEV 649
N G +YDKF++P E+ DYRT VSG+ + ++ F++ + EV
Sbjct: 32 NVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEV 77
>BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 46.8 bits (106), Expect = 1e-04
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI--VQKEVADVI-RGKILVGHSL 691
G C+ D+ VKP ++ DY T SGI K+ ++N + VQ+++ ++ +LVGHSL
Sbjct: 254 GCCVMDELVKPENKILDYLTSFSGITKK-ILNPVTTKLKDVQRQLKALLPPDAVLVGHSL 312
Query: 692 KNDLNVLFLSHP 727
DL L + HP
Sbjct: 313 DLDLRALKMIHP 324
>AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens
cDNA FLJ32692 fis, clone TESTI2000238. ).
Length = 443
Score = 46.8 bits (106), Expect = 1e-04
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI--VQKEVADVI-RGKILVGHSL 691
G C+ D+ VKP ++ DY T SGI K+ ++N + VQ+++ ++ +LVGHSL
Sbjct: 254 GCCVMDELVKPENKILDYLTSFSGITKK-ILNPVTTKLKDVQRQLKALLPPDAVLVGHSL 312
Query: 692 KNDLNVLFLSHP 727
DL L + HP
Sbjct: 313 DLDLRALKMIHP 324
>AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 46.8 bits (106), Expect = 1e-04
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI--VQKEVADVI-RGKILVGHSL 691
G C+ D+ VKP ++ DY T SGI K+ ++N + VQ+++ ++ +LVGHSL
Sbjct: 254 GCCVMDELVKPENKILDYLTSFSGITKK-ILNPVTTKLKDVQRQLKALLPPDAVLVGHSL 312
Query: 692 KNDLNVLFLSHP 727
DL L + HP
Sbjct: 313 DLDLRALKMIHP 324
>AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product
protein.
Length = 547
Score = 46.8 bits (106), Expect = 1e-04
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +2
Query: 521 GDCIYDKFVKPREEVKDYRTIVSGIRKEDLINGEDFSI--VQKEVADVI-RGKILVGHSL 691
G C+ D+ VKP ++ DY T SGI K+ ++N + VQ+++ ++ +LVGHSL
Sbjct: 165 GCCVMDELVKPENKILDYLTSFSGITKK-ILNPVTTKLKDVQRQLKALLPPDAVLVGHSL 223
Query: 692 KNDLNVLFLSHP 727
DL L + HP
Sbjct: 224 DLDLRALKMIHP 235
>BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein.
Length = 318
Score = 44.8 bits (101), Expect = 4e-04
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 530 IYDKFVKPREEVKDYRTIVSGIRKEDLINGE-DFSIVQKEVADVIRGK-ILVGHSLKNDL 703
+YD FVKP E+ DY T SG+ + D+ VQ + + IL+GHSL++DL
Sbjct: 173 VYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDL 232
Query: 704 NVLFLSH 724
L L H
Sbjct: 233 LALKLIH 239
>BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein.
Length = 347
Score = 44.8 bits (101), Expect = 4e-04
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 530 IYDKFVKPREEVKDYRTIVSGIRKEDLINGE-DFSIVQKEVADVIRGK-ILVGHSLKNDL 703
+YD FVKP E+ DY T SG+ + D+ VQ + + IL+GHSL++DL
Sbjct: 202 VYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDL 261
Query: 704 NVLFLSH 724
L L H
Sbjct: 262 LALKLIH 268
>AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein.
Length = 318
Score = 44.8 bits (101), Expect = 4e-04
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 530 IYDKFVKPREEVKDYRTIVSGIRKEDLINGE-DFSIVQKEVADVIRGK-ILVGHSLKNDL 703
+YD FVKP E+ DY T SG+ + D+ VQ + + IL+GHSL++DL
Sbjct: 173 VYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDL 232
Query: 704 NVLFLSH 724
L L H
Sbjct: 233 LALKLIH 239
>AL158826-18|CAI12845.1| 189|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 189
Score = 41.5 bits (93), Expect = 0.004
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 ETLNLEPDQADGHEDDIALN-DRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSL 507
E + Q E ++L+ ++QA +T+ +A+DCEMVG+G G + M ARVS+
Sbjct: 118 EAAKIARKQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSI 174
>AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein
FLJ12484 variant protein.
Length = 188
Score = 39.5 bits (88), Expect = 0.015
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 644 EVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKP 763
++ +++GK++VGH+L ND L HP+ RDT+ Y P
Sbjct: 43 QILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTT-YVP 81
>BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 226 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 405
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 406 KQAKNK 423
+QAK +
Sbjct: 107 EQAKRQ 112
>BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 226 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 405
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 406 KQAKNK 423
+QAK +
Sbjct: 107 EQAKRQ 112
>AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 226 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 405
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 406 KQAKNK 423
+QAK +
Sbjct: 107 EQAKRQ 112
>AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 226 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 405
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 406 KQAKNK 423
+QAK +
Sbjct: 107 EQAKRQ 112
>AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 226 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 405
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 406 KQAKNK 423
+QAK +
Sbjct: 107 EQAKRQ 112
>AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 226 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 405
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 406 KQAKNK 423
+QAK +
Sbjct: 107 EQAKRQ 112
>AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense
transcripts 2 protein.
Length = 1272
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 226 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 405
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 47 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 106
Query: 406 KQAKNK 423
+QAK +
Sbjct: 107 EQAKRQ 112
>AB209639-1|BAD92876.1| 189|Homo sapiens interferon stimulated gene
20kDa variant protein.
Length = 189
Score = 30.3 bits (65), Expect = 9.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 644 EVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTS 751
++ +++GK++VGH LK+D L I DTS
Sbjct: 84 QILQLLKGKLVVGHDLKHDFQALKEDMSGYTIYDTS 119
>AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein.
Length = 1298
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 226 KEEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDR 405
KE +AP+++ RK E K K KD + + E+ E ++ H+++
Sbjct: 73 KEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQE 132
Query: 406 KQAKNK 423
+QAK +
Sbjct: 133 EQAKRQ 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,459,372
Number of Sequences: 237096
Number of extensions: 1755415
Number of successful extensions: 3550
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 3458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3536
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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