Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_H24
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1583 + 28036125-28037030,28037411-28037656 31 1.2
07_03_0068 - 13021090-13021197,13021319-13021354,13022245-130223... 31 1.2
04_04_0909 - 29312875-29313135,29313235-29313556,29313676-293139... 31 1.2
01_06_0450 + 29472531-29472838,29472998-29473092,29473195-294732... 30 2.1
08_02_0114 + 12754155-12754370,12754792-12755340,12755410-127555... 29 3.7
12_02_0585 + 20824752-20825954,20826141-20826329,20826533-208266... 29 4.9
07_03_1651 - 28395369-28395436,28395524-28395575,28395857-283960... 29 4.9
11_06_0452 + 23774378-23775054,23775228-23775411,23775911-237759... 29 6.5
04_03_0235 - 13111282-13111878 29 6.5
03_05_0325 + 23135816-23135894,23136161-23136333,23136440-231366... 29 6.5
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 29 6.5
12_02_0500 + 19735879-19736144,19736325-19736664,19738181-19738831 28 8.5
10_08_0757 + 20367348-20367560,20367657-20367904,20371406-203717... 28 8.5
09_03_0008 - 11451631-11451688,11451837-11452377,11452620-11452692 28 8.5
05_03_0660 + 16724361-16724684,16725085-16725300 28 8.5
03_01_0154 - 1223879-1224274,1224391-1224585 28 8.5
01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320 28 8.5
>08_02_1583 + 28036125-28037030,28037411-28037656
Length = 383
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 544 WLKF*KLACYPMRLIWEHWPITP 612
W F KLAC P+ + E WP +P
Sbjct: 169 WRDFLKLACMPLAAVVESWPTSP 191
>07_03_0068 -
13021090-13021197,13021319-13021354,13022245-13022322,
13022412-13022514,13022732-13022817,13023036-13023090,
13023186-13023250,13023997-13024086,13024415-13024530,
13024701-13024710
Length = 248
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -2
Query: 357 SHIFACFNHAKMGNWQPLAAVTFVSGTRTVIRKSKVQL 244
+H+ C + GNW+ + + F+ G + V K K+Q+
Sbjct: 139 AHLQLCIESSSNGNWRSIWTLEFIDGLQLVEIKGKIQV 176
>04_04_0909 -
29312875-29313135,29313235-29313556,29313676-29313923,
29314032-29314259
Length = 352
Score = 31.1 bits (67), Expect = 1.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 544 WLKF*KLACYPMRLIWEHWPITPPN 618
W F +L CYP+ + WP PP+
Sbjct: 133 WRDFLRLHCYPLESFIDQWPSNPPS 157
>01_06_0450 +
29472531-29472838,29472998-29473092,29473195-29473262,
29473347-29473390,29473467-29473544,29473657-29473810,
29474290-29474376,29474653-29474805,29474890-29475000,
29475211-29475276,29475364-29475543
Length = 447
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 452 LRGKALRIGIPSLPASQSXR--RTRFGIQYQIPLPTSSLVSIT 330
LRG L IG+PS P + +R G Y LPT++ +SI+
Sbjct: 232 LRGCLLNIGVPSSPTTNKNAYCLSRPGTSYLTGLPTNAKISIS 274
>08_02_0114 +
12754155-12754370,12754792-12755340,12755410-12755512,
12755552-12756060
Length = 458
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 476 EDFVELVHLRGKALRIGIPSLPASQSXRRTRF--GI-QYQIPLPTSSLVSITRRW 321
E F V + K + I +P L A Q R+ GI + PLPT+ +V +T +W
Sbjct: 337 EQFARFVEVIQK-IHINVPLLDAMQMPTYARYLKGILNNKRPLPTTEVVKLTEQW 390
>12_02_0585 +
20824752-20825954,20826141-20826329,20826533-20826690,
20826913-20827009,20827368-20827730,20829225-20829303,
20830180-20830286
Length = 731
Score = 29.1 bits (62), Expect = 4.9
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 268 NCSCTANKGHGGQWLPISHLRVIE 339
+C C +KG + +P+ HLR+++
Sbjct: 557 DCKCEQHKGWSNEMIPLDHLRMVD 580
>07_03_1651 -
28395369-28395436,28395524-28395575,28395857-28396092,
28396362-28396419,28396509-28396577,28396686-28396791,
28397104-28397171,28397266-28397385,28398144-28398231,
28399433-28399534,28399699-28399757,28399866-28400003,
28400222-28400473,28400508-28400593,28401061-28401165,
28402351-28402516
Length = 590
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -2
Query: 390 DTLWDPISDSTSHIFACFNHAKMGNWQPLAAVTFVSGTRTVIRKSKVQL-RHKKFTPN 220
DT++DP++ S HI+ C+ + A+VT V G ++ RKSK L R PN
Sbjct: 204 DTVFDPVALSCGHIY-CYLCSCSA-----ASVTIVDGLKSAERKSKCPLCRQAGVFPN 255
>11_06_0452 +
23774378-23775054,23775228-23775411,23775911-23775996,
23776116-23777010
Length = 613
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 410 ASQSXRRTRFGIQYQIPLPTSSLVSITRRWEIGNHW 303
A+QS T F I Y IP+ ++ S+TRR+E H+
Sbjct: 423 ATQSAEET-FRINYFIPIVDQAISSLTRRFEQYQHY 457
>04_03_0235 - 13111282-13111878
Length = 198
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 5/98 (5%)
Frame = -2
Query: 633 RILRPVRRRYGPVLPNQSHRITRQLS-KLQPFRHPTDVDPPVLKAADIXXXXXXXXXXXR 457
R+ RP RRR+ P+ SHR+ +L+ + T P + A +
Sbjct: 21 RLRRPHRRRFLASRPHSSHRLGSRLTVAVDSSPTATPAAAPTVTALAVTIAAAASPPAPA 80
Query: 456 PFERQGSPHRDPILACVAIHXE----DTLWDPISDSTS 355
+ H P+ A + + D +W P+ TS
Sbjct: 81 SLAARRCRHLPPLAAVITTNRRQPAVDHIWSPLQTPTS 118
>03_05_0325 +
23135816-23135894,23136161-23136333,23136440-23136613,
23136881-23137004,23137090-23137190,23137337-23137423,
23137801-23137896,23138209-23138329,23138475-23138603,
23139458-23139549,23139660-23139771,23140189-23140541,
23140670-23140899,23141179-23141278,23143357-23143411,
23143548-23145496,23145587-23145745,23146514-23146685,
23146758-23147056,23147246-23147521
Length = 1626
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -3
Query: 488 FFFCEDFVELVHLRGKALRIGIPSLPASQSXRRTRFGIQYQIP 360
F+ + +E L+GK L +G S+ A+ S +FG++ +P
Sbjct: 111 FYATVEILENPSLKGKPLAVGSMSMIATASYEARKFGVRAAMP 153
>02_01_0084 -
573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 564 GVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHL 683
G L+ D G + AA++A F+ VW WN+C R L
Sbjct: 274 GDLNRVCDSGPVMEKAAKEATMFL--VWIIGWNICLLRLL 311
>12_02_0500 + 19735879-19736144,19736325-19736664,19738181-19738831
Length = 418
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 672 FRHLPRWLQDNDYLHKGHRPPLP 740
+ LP WL+DN+++H +R P
Sbjct: 47 YEELPEWLKDNEFIHGYYRCEWP 69
>10_08_0757 +
20367348-20367560,20367657-20367904,20371406-20371730,
20372299-20372541
Length = 342
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 544 WLKF*KLACYPMRLIWEHWPITPPN 618
W + +L CYP+ WP PP+
Sbjct: 128 WRDYLRLHCYPLHQFVPDWPSNPPS 152
>09_03_0008 - 11451631-11451688,11451837-11452377,11452620-11452692
Length = 223
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -2
Query: 423 PILACVAIHXEDTLWDPISDSTSHIFACFNHAKMGNWQPLAAVTFVSGT 277
P L A+H WD + D ++ ++ A +W P+ V GT
Sbjct: 116 PTLPQFALHLGANYWDTVQDDSTEVYEALFMA-WASWAPVCLVNTDQGT 163
>05_03_0660 + 16724361-16724684,16725085-16725300
Length = 179
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = -2
Query: 702 CLAANVANV*NGTRSTTPPILCERILRPVRRRYGPVLPNQSHRITRQLSKLQPFRHPTDV 523
CL+ V+ + PP + RP R Y PV+ + +T+++ T
Sbjct: 33 CLSNVVSAAAKSPAAAPPPAVVLVHARPARPLYYPVIDGGGYVLTQEVMDSMDRYMATAA 92
Query: 522 DPPVLKAADI 493
D V KA DI
Sbjct: 93 DSVVAKARDI 102
>03_01_0154 - 1223879-1224274,1224391-1224585
Length = 196
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 544 WLKF*KLACYPMRLIWEHWPITPPN 618
W + +L CYP+ WP PP+
Sbjct: 122 WRDYLRLHCYPLHRYLPDWPSNPPS 146
>01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320
Length = 463
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 561 AGVLSDEIDLGALAHNAAEQAEEFVRKVWE---ASWNVCHFR-HLPRWL 695
AG L DE +LGA E+ + R +W+ WN H L W+
Sbjct: 37 AGELGDEGELGARRARRGEEVQRRFRLLWKFRCVKWNFSHMEVQLMDWM 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,044,291
Number of Sequences: 37544
Number of extensions: 484983
Number of successful extensions: 1138
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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