Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H24
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001487-1|AAN71242.1|  444|Drosophila melanogaster LD23846p pro...   185   8e-47
AE014297-3179|AAN13909.1|  444|Drosophila melanogaster CG5315-PC...   185   8e-47
AE014297-3178|AAF56016.2|  444|Drosophila melanogaster CG5315-PA...   185   8e-47
AE014297-3180|AAF56017.3|  362|Drosophila melanogaster CG5315-PB...   151   1e-36
AY060432-1|AAL25471.1|  351|Drosophila melanogaster LD44720p pro...    31   2.8  
AE014297-1891|AAN13617.1|  351|Drosophila melanogaster CG7530-PC...    31   2.8  
AE014297-1890|AAF55092.1|  351|Drosophila melanogaster CG7530-PB...    31   2.8  
AE014297-1889|AAF55091.1|  351|Drosophila melanogaster CG7530-PA...    31   2.8  
AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein ...    29   8.4  
AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA...    29   8.4  

>BT001487-1|AAN71242.1|  444|Drosophila melanogaster LD23846p
           protein.
          Length = 444

 Score =  185 bits (450), Expect = 8e-47
 Identities = 84/123 (68%), Positives = 98/123 (79%), Gaps = 4/123 (3%)
 Frame = +3

Query: 402 LRRRQGWDPDAESLASQ----MXXXXXXXXXXXXGCPLPSTPEDQHLLDAEMAEVLKAGV 569
           LR+R+GW P+ +SL+      +            GCPLPSTPED  L++AEM EVLKAGV
Sbjct: 73  LRKRRGWGPE-DSLSPNDLDILEYDDELVEEDDAGCPLPSTPEDTQLIEAEMTEVLKAGV 131

Query: 570 LSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFS 749
           LSDEIDLGALAHNAAEQAEEFVRKVWEASW VCH+++LP+WLQDND+LH+GHRPPLPSF 
Sbjct: 132 LSDEIDLGALAHNAAEQAEEFVRKVWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFR 191

Query: 750 ACF 758
           ACF
Sbjct: 192 ACF 194



 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +2

Query: 803 THLLGCVAFIGVAXYFLSRPSIEIK 877
           THLLGC+AFIGVA YF+SRPS+EI+
Sbjct: 209 THLLGCIAFIGVALYFISRPSVEIQ 233


>AE014297-3179|AAN13909.1|  444|Drosophila melanogaster CG5315-PC,
           isoform C protein.
          Length = 444

 Score =  185 bits (450), Expect = 8e-47
 Identities = 84/123 (68%), Positives = 98/123 (79%), Gaps = 4/123 (3%)
 Frame = +3

Query: 402 LRRRQGWDPDAESLASQ----MXXXXXXXXXXXXGCPLPSTPEDQHLLDAEMAEVLKAGV 569
           LR+R+GW P+ +SL+      +            GCPLPSTPED  L++AEM EVLKAGV
Sbjct: 73  LRKRRGWGPE-DSLSPNDLDILEYDDELVEEDDAGCPLPSTPEDTQLIEAEMTEVLKAGV 131

Query: 570 LSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFS 749
           LSDEIDLGALAHNAAEQAEEFVRKVWEASW VCH+++LP+WLQDND+LH+GHRPPLPSF 
Sbjct: 132 LSDEIDLGALAHNAAEQAEEFVRKVWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFR 191

Query: 750 ACF 758
           ACF
Sbjct: 192 ACF 194



 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +2

Query: 803 THLLGCVAFIGVAXYFLSRPSIEIK 877
           THLLGC+AFIGVA YF+SRPS+EI+
Sbjct: 209 THLLGCIAFIGVALYFISRPSVEIQ 233


>AE014297-3178|AAF56016.2|  444|Drosophila melanogaster CG5315-PA,
           isoform A protein.
          Length = 444

 Score =  185 bits (450), Expect = 8e-47
 Identities = 84/123 (68%), Positives = 98/123 (79%), Gaps = 4/123 (3%)
 Frame = +3

Query: 402 LRRRQGWDPDAESLASQ----MXXXXXXXXXXXXGCPLPSTPEDQHLLDAEMAEVLKAGV 569
           LR+R+GW P+ +SL+      +            GCPLPSTPED  L++AEM EVLKAGV
Sbjct: 73  LRKRRGWGPE-DSLSPNDLDILEYDDELVEEDDAGCPLPSTPEDTQLIEAEMTEVLKAGV 131

Query: 570 LSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFS 749
           LSDEIDLGALAHNAAEQAEEFVRKVWEASW VCH+++LP+WLQDND+LH+GHRPPLPSF 
Sbjct: 132 LSDEIDLGALAHNAAEQAEEFVRKVWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFR 191

Query: 750 ACF 758
           ACF
Sbjct: 192 ACF 194



 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +2

Query: 803 THLLGCVAFIGVAXYFLSRPSIEIK 877
           THLLGC+AFIGVA YF+SRPS+EI+
Sbjct: 209 THLLGCIAFIGVALYFISRPSVEIQ 233


>AE014297-3180|AAF56017.3|  362|Drosophila melanogaster CG5315-PB,
           isoform B protein.
          Length = 362

 Score =  151 bits (366), Expect = 1e-36
 Identities = 67/85 (78%), Positives = 76/85 (89%)
 Frame = +3

Query: 504 PSTPEDQHLLDAEMAEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHL 683
           P T ++Q   +A M EVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASW VCH+++L
Sbjct: 29  PDTVKEQ-AENAVMTEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWKVCHYKNL 87

Query: 684 PRWLQDNDYLHKGHRPPLPSFSACF 758
           P+WLQDND+LH+GHRPPLPSF ACF
Sbjct: 88  PKWLQDNDFLHRGHRPPLPSFRACF 112



 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +2

Query: 803 THLLGCVAFIGVAXYFLSRPSIEIK 877
           THLLGC+AFIGVA YF+SRPS+EI+
Sbjct: 127 THLLGCIAFIGVALYFISRPSVEIQ 151


>AY060432-1|AAL25471.1|  351|Drosophila melanogaster LD44720p
           protein.
          Length = 351

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 639 KVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSAC 755
           K+ +  W +C+F   P  L+ N Y+ +G+R  LPS   C
Sbjct: 69  KLSKFKW-LCNFDDAPSHLKFNPYIRRGYRTFLPSTKMC 106


>AE014297-1891|AAN13617.1|  351|Drosophila melanogaster CG7530-PC,
           isoform C protein.
          Length = 351

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 639 KVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSAC 755
           K+ +  W +C+F   P  L+ N Y+ +G+R  LPS   C
Sbjct: 69  KLSKFKW-LCNFDDAPSHLKFNPYIRRGYRTFLPSTKMC 106


>AE014297-1890|AAF55092.1|  351|Drosophila melanogaster CG7530-PB,
           isoform B protein.
          Length = 351

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 639 KVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSAC 755
           K+ +  W +C+F   P  L+ N Y+ +G+R  LPS   C
Sbjct: 69  KLSKFKW-LCNFDDAPSHLKFNPYIRRGYRTFLPSTKMC 106


>AE014297-1889|AAF55091.1|  351|Drosophila melanogaster CG7530-PA,
           isoform A protein.
          Length = 351

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 639 KVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSAC 755
           K+ +  W +C+F   P  L+ N Y+ +G+R  LPS   C
Sbjct: 69  KLSKFKW-LCNFDDAPSHLKFNPYIRRGYRTFLPSTKMC 106


>AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein
           protein.
          Length = 773

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 609 RYGPVLPNQSHRITRQLSKLQP-FRHPTDVDPPVLKAAD 496
           RY   L  Q H++  ++  + P F+ P D  PPV + +D
Sbjct: 355 RYRKRLEEQRHQLIVKMQTVNPEFKPPADYKPPVTRVSD 393


>AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA
           protein.
          Length = 787

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 609 RYGPVLPNQSHRITRQLSKLQP-FRHPTDVDPPVLKAAD 496
           RY   L  Q H++  ++  + P F+ P D  PPV + +D
Sbjct: 355 RYRKRLEEQRHQLIVKMQTVNPEFKPPADYKPPVTRVSD 393


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,038,413
Number of Sequences: 53049
Number of extensions: 785975
Number of successful extensions: 1911
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1908
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)