Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H24
         (877 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical ...    73   3e-13
U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical pr...    71   8e-13
U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I pro...    31   0.82 
AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    31   0.82 
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    31   0.82 
Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical
           protein Y32H12A.5 protein.
          Length = 581

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 31/78 (39%), Positives = 45/78 (57%)
 Frame = +3

Query: 525 HLLDAEMAEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWLQDN 704
           HL  ++  + L+  +  +E+    +     E     +++ WEA W   +F  LP WLQDN
Sbjct: 227 HLDHSDDDDELEVEINEEEV---IIPSETGEGPRAVIKRFWEARWKATNFETLPEWLQDN 283

Query: 705 DYLHKGHRPPLPSFSACF 758
           +YL  GHRPPLPSFS+CF
Sbjct: 284 EYLRTGHRPPLPSFSSCF 301



 Score = 34.7 bits (76), Expect = 0.088
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2

Query: 803 THLLGCVAFIGVAXYFLSRP 862
           TH+ GCVAF G+  +FL+RP
Sbjct: 316 THMYGCVAFFGIGIWFLTRP 335


>U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical
           protein C43G2.1 protein.
          Length = 434

 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 31/61 (50%), Positives = 41/61 (67%)
 Frame = +3

Query: 576 DEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSAC 755
           DE+++  +  + +EQ    V K +EA W V  + HLP WLQDN++L  GHRPPLPSFS C
Sbjct: 133 DELEVD-VKEDRSEQTG-IVTKTYEARWKVLKYEHLPEWLQDNEFLRHGHRPPLPSFSEC 190

Query: 756 F 758
           F
Sbjct: 191 F 191



 Score = 34.7 bits (76), Expect = 0.088
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +2

Query: 803 THLLGCVAFIGVAXYFLSRPSIEIK 877
           THL+GCVAF  +A +FL+RP   I+
Sbjct: 206 THLIGCVAFFFLACWFLTRPDNHIQ 230


>U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I
           protein.
          Length = 396

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 377 IQYQIPLPTSSLVSITRRWEIGNHWPP 297
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 256 LKYTKGLPTSLAMSSTQQWDKENAWPP 282


>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 377 IQYQIPLPTSSLVSITRRWEIGNHWPP 297
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 377 IQYQIPLPTSSLVSITRRWEIGNHWPP 297
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical
           protein F46F3.2 protein.
          Length = 618

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 380 GIQYQIPLPTSSLVSITRRWEIGNHWPP 297
           G+ YQ PLP+S+++   R+ E     PP
Sbjct: 238 GLDYQRPLPSSTILPFLRKMEYDARQPP 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,432,321
Number of Sequences: 27780
Number of extensions: 405765
Number of successful extensions: 924
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)