Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_H23
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical p... 101 9e-22
Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical ... 81 1e-15
U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical pr... 71 8e-13
AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical pr... 49 5e-06
AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical ... 49 5e-06
AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical ... 47 2e-05
>Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical
protein F26E4.12 protein.
Length = 163
Score = 101 bits (241), Expect = 9e-22
Identities = 46/93 (49%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
Frame = +3
Query: 357 NQFAGQEPGNPEEIVCFASERKVKFD--LFEKVDVNGDNASPLWKYLKHKQGGTLGSFIK 530
NQFAGQEP +I F ++ K KF+ LF+K+DVNGD SPL+K+LK+++GG + IK
Sbjct: 66 NQFAGQEPSCEIDIQAFVAD-KFKFEPTLFQKIDVNGDKQSPLFKFLKNEKGGFMFDAIK 124
Query: 531 WNFTKFIINKDGVPVERHGPNTDPLDLVXSLEK 629
WNFTKF++ +DG ++R GP TDP D+ +++
Sbjct: 125 WNFTKFLVGRDGKIIKRFGPTTDPKDMEKDIKE 157
Score = 75.8 bits (178), Expect = 4e-14
Identities = 37/58 (63%), Positives = 41/58 (70%)
Frame = +2
Query: 182 VKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPC 355
VKN G+DV L YKG V IIVNVASQCGLT NY QL EL + Y + GL +LAFPC
Sbjct: 9 VKNANGDDVSLSDYKGKVLIIVNVASQCGLTNKNYTQLKELLDVY-KKDGLEVLAFPC 65
>Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical
protein R05H10.5 protein.
Length = 163
Score = 99 bits (238), Expect = 2e-21
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = +3
Query: 357 NQFAGQEPGNPEEIVCFASERKVKFD--LFEKVDVNGDNASPLWKYLKHKQGGTLGSFIK 530
NQF GQEP +I F ++ K KF+ LF+K+DVNGDN +PL+K+LK ++GG L IK
Sbjct: 66 NQFGGQEPSCEIDIAAFVAD-KFKFEPTLFQKIDVNGDNTAPLYKFLKQEKGGFLVDAIK 124
Query: 531 WNFTKFIINKDGVPVERHGPNTDPLDLVXSLE 626
WNFTKF++ +DG ++R P T+P D+ +E
Sbjct: 125 WNFTKFLVGRDGHVIKRFSPTTEPKDMKKDIE 156
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/60 (58%), Positives = 42/60 (70%)
Frame = +2
Query: 176 LPVKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPC 355
+ VKN +GED L Y+G V IIVNVASQCGLT +NY Q EL + Y + GL +LAFPC
Sbjct: 7 ITVKNAQGEDTPLSNYQGKVLIIVNVASQCGLTNSNYNQFKELLDVY-KKDGLEVLAFPC 65
>AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical
protein T09A12.2b protein.
Length = 188
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +3
Query: 357 NQFAGQEPGNPEEIVCFA-SERKVKFDLFEKVDVNGDNASPLWKYLKHKQGGTLGSFIKW 533
NQF QEP +I+ F S D++ K++VNG N PLWK+LK ++G +L + I W
Sbjct: 93 NQFEKQEPETEGKILDFVKSSYTYAPDMYSKIEVNGQNTHPLWKFLKKERGSSLSADIPW 152
Query: 534 NFTKFIINKDGVPVERHGPNTDPLDLVXSLEK 629
NF+KF+++K+G V R+ + +P+DL + +
Sbjct: 153 NFSKFLVDKNGHVVGRYSHSVNPIDLEEEISR 184
Score = 55.2 bits (127), Expect = 6e-08
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +2
Query: 185 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPC 355
KNI G+ V ++ Y+ V + NVAS CG T +NY EL Y E KG R+ AFPC
Sbjct: 37 KNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYRE-KGFRVAAFPC 92
>U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical
protein R03G5.5 protein.
Length = 193
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Frame = +3
Query: 432 DLFEKVDVNGD----NASPLWKYLKHKQGGTLGSFIKWNFTKFIINKDGVPVERHGPNTD 599
DL+ KV VNG PLW +LK +QGGTL IKWNFTKF++N+ G V R GP+T+
Sbjct: 117 DLYGKVTVNGGPLIGEEEPLWTFLKKEQGGTLFDAIKWNFTKFLVNRQGKVVARFGPSTN 176
Query: 600 P 602
P
Sbjct: 177 P 177
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +2
Query: 182 VKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPC 355
V++ G+ V LD Y G V IIVNVAS CGLT +NYK+L L ++Y +GLR+ AFPC
Sbjct: 38 VRDNSGDLVSLDKYSGLVVIIVNVASYCGLTNSNYKELKSLNDKY-HLRGLRVAAFPC 94
>AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical
protein T09A12.2a protein.
Length = 125
Score = 55.2 bits (127), Expect = 6e-08
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +2
Query: 185 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPC 355
KNI G+ V ++ Y+ V + NVAS CG T +NY EL Y E KG R+ AFPC
Sbjct: 37 KNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYRE-KGFRVAAFPC 92
>Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical
protein C11E4.1 protein.
Length = 223
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +2
Query: 182 VKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPC 355
V+ ++GE L Y+G V ++VNVA+ C T Y N L E+Y +S+G ++AFPC
Sbjct: 45 VETLQGEYTDLSQYRGQVLLMVNVATFCAYT-QQYTDFNPLIEKY-QSQGFTLIAFPC 100
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 15/67 (22%)
Frame = +3
Query: 435 LFEKVDVNGDNASPLWKYLKH-------KQGGT--------LGSFIKWNFTKFIINKDGV 569
++ K+D NGDN P+++++K K G T S I WNF KF+I+++G
Sbjct: 135 IYGKLDTNGDNQHPIYEFVKESCPQTVDKIGKTDELMYNPIRASDITWNFEKFLIDRNGQ 194
Query: 570 PVERHGP 590
P R P
Sbjct: 195 PRFRFHP 201
>Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical
protein C11E4.2 protein.
Length = 224
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +2
Query: 182 VKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPC 355
++ ++GE L Y+G V ++VNVA+ C T Y N + E+Y +++GL ++AFPC
Sbjct: 46 IETLQGEYTDLSQYRGKVILLVNVATFCAYT-QQYTDFNPMLEKY-QAQGLTLVAFPC 101
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 15/67 (22%)
Frame = +3
Query: 435 LFEKVDVNGDNASPLWKYLKH-------KQGGT--------LGSFIKWNFTKFIINKDGV 569
++ K+DVNGDN PL++++K K G T S I WNF KF+I+++G
Sbjct: 136 IYGKIDVNGDNHHPLYEFVKESCPQTVDKIGKTDELMYNPVRPSDITWNFEKFLIDRNGQ 195
Query: 570 PVERHGP 590
P R P
Sbjct: 196 PRFRFHP 202
>AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical
protein F55A3.5 protein.
Length = 145
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = +3
Query: 435 LFEKVDVNGDNASPLWKYLKH-------KQGGTLGSFIKWNFTKFIINKDGVPVERHGPN 593
+++K+DVNG N PL+K LK G LG I +NFTKF + KDG ++R
Sbjct: 62 IYQKIDVNGVNTDPLYKLLKKVNVVTLGDSIGILGDSICYNFTKFFVGKDGHVIKRFCRT 121
Query: 594 TDPLD 608
T P D
Sbjct: 122 TLPKD 126
>AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical
protein Y94H6A.4 protein.
Length = 126
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +2
Query: 182 VKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPC 355
++ +KG+ L Y+G V ++VNVA+ C T Y N + ++Y + +GL I AFPC
Sbjct: 45 IETLKGDYTDLSQYRGKVTLLVNVATFCAYT-QQYTDFNPILDKY-QKQGLVIAAFPC 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,220,981
Number of Sequences: 27780
Number of extensions: 339082
Number of successful extensions: 817
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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