Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_H22
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical pr... 30 1.9
L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 4.5
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 4.5
Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 29 5.9
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 29 5.9
AC024798-9|AAK29918.2| 640|Caenorhabditis elegans Hypothetical ... 29 5.9
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 28 7.8
>L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical
protein ZC262.5 protein.
Length = 54
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 141 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 254
AAG+ +SQI A V QCTK A K P +A L+T
Sbjct: 6 AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical
protein R05D3.6 protein.
Length = 54
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 141 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 254
AAG+ +SQI A V QCTK A K P +A L+T
Sbjct: 6 AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 441 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 536
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 441 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 536
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 441 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 536
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical
protein Y57G11B.5 protein.
Length = 225
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/90 (23%), Positives = 37/90 (41%)
Frame = +3
Query: 111 MWKTVLITIFAAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLN 290
M+K+++ + A +A S +T + AED P A R F C K + + +
Sbjct: 1 MFKSLVFSALLAYAVAAPMSSMTTAIDRIDQIFQAEDSTPACNAETRRFNACFKDINEKS 60
Query: 291 VLKTEIEEAKPNGALDEVFKKYCDKSAQLK 380
L+ ++ + EV + D LK
Sbjct: 61 RLEM-FQDVTKFPSKSEVLESVADIRKALK 89
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 442 TSMMPKTVPINSSTLCATRTETGLLCSSR--KAALXCFQQKTENLXTCFLNL 591
TS P+NS+ C R C + + CF T N TC+ L
Sbjct: 296 TSTQVCASPLNSTQTCIPRLPDRRYCIDEPCQVGMKCFDNVTSNAYTCYTKL 347
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 442 TSMMPKTVPINSSTLCATRTETGLLCSSR--KAALXCFQQKTENLXTCFLNL 591
TS P+NS+ C R C + + CF T N TC+ L
Sbjct: 296 TSTQVCASPLNSTQTCIPRLPDRRYCIDEPCQVGMKCFDNVTSNAYTCYTKL 347
>AC024798-9|AAK29918.2| 640|Caenorhabditis elegans Hypothetical
protein Y48G9A.3 protein.
Length = 640
Score = 28.7 bits (61), Expect = 5.9
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +1
Query: 550 QQKTENLXTCFLNLKQSFPTVESA-NNLSLVEKCAKVDEMT-SCIVKSLEXCSTPTPANM 723
Q+KTENL LK+ SA +N SL + M + + K +E ST PA
Sbjct: 12 QEKTENLSEEDA-LKEEIRRFSSAVSNPSL-----RAHGMAYAALTKLIERRSTEIPAQF 65
Query: 724 AESLIKFMRXDSPXPTXLPKXIDCTVXLLSVILVPXKXMTLKAL 855
+ L+K +S PK LL V+ TLK+L
Sbjct: 66 VKGLVKMSIANSIRLYGQPKSFQAVSKLLQVLAKRDPISTLKSL 109
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 391 ARCCRACVLV*ATNMRTTSMMPKTVPINSSTLCATRTETGLLCSSRKAA 537
A C C++ +TN+RT S P P C LLC S A
Sbjct: 544 AMCKIWCLISGSTNIRTVSNFPDGAPCGPGQYCIKGECRPLLCGSTTLA 592
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,232,674
Number of Sequences: 27780
Number of extensions: 337067
Number of successful extensions: 925
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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