Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H21
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     26   1.8  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    24   7.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   7.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.5  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = +3

Query: 573 PGLNPARSYAPIGRATWS-PRLAPARSPPWGTTSP 674
           P + P   +   GR  WS P + P R PPW    P
Sbjct: 68  PAIQPVGIFGRPGRPWWSVPGIPPFR-PPWHPRPP 101


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 396 NLWSESGQLWRRLRRPSHSSLVGGAA 319
           +LW+    +W+R+ R    +L+G  A
Sbjct: 219 DLWTRCEAMWKRIDRSECRNLIGDMA 244


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 546  GPDRPRQTLPGLNPARSYAPIGRATWS 626
            G   PR+ L    PA    P GR +W+
Sbjct: 1362 GRSTPRELLESSQPAGGGTPRGRHSWA 1388


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 660  GTTSPPRXYEKAVSDRFP 713
            G +SPP+  E  + D FP
Sbjct: 1585 GASSPPKVIELTIGDPFP 1602


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,091
Number of Sequences: 2352
Number of extensions: 16417
Number of successful extensions: 57
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)