Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H18
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    30   2.5  
AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z82278-4|CAB05257.2|  487|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z81541-6|CAB04413.2|  326|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL031633-16|CAA21028.1|  374|Caenorhabditis elegans Hypothetical...    28   7.7  

>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +2

Query: 233 FFLILIRKEINTNTIPYNCLRVYLAYYVVIILRACLRMPMIDVLIFLFYLTNAFFTALTV 412
           F  I I  +IN N   ++   +YL  Y+ I     L   +I V IF++  T +  T + +
Sbjct: 207 FIYIPIMIDINKNQHLHSQQHIYLQNYIFIQSFLVLFFKLIPVPIFIWSKTTSILTEMAM 266

Query: 413 II 418
           II
Sbjct: 267 II 268


>AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.4 protein.
          Length = 309

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
 Frame = +2

Query: 227 NFFFLILIRKEINTNTIPYNCLRVYLAYYVVIILRACLR---MPMIDVLIFLFYLTNAFF 397
           + F+++ +     ++ + + C  VY+  Y     RA  R   +P+++ L F+  L     
Sbjct: 105 SIFYILFVALNCVSSILQFGCFHVYITSYKYHKYRAFFRGWFVPILNCLNFVLALIFLIN 164

Query: 398 TALTVIILITFDIPILGPKCDLNAFFARRLIVSSNYFKDCTFIIQFLRKGLN 553
               VI     +  I       +  F +++  +   FK  +   +F  K +N
Sbjct: 165 LNFNVISFYMVNSLIFYLAITFSLLFFKKIFYAWKRFKQGSLASEFFNKYMN 216


>Z82278-4|CAB05257.2|  487|Caenorhabditis elegans Hypothetical
           protein M162.5 protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 365 IFLFYLTNAFFTALTVIILITFDIPILGPKCDLNAFFARRLIVSSNY 505
           I  + L   FF A  +  L TF IPI+ P  D N F   R +   +Y
Sbjct: 111 ISTYGLRKVFFAAGMLTSLTTFLIPIVAP-MDFNLFLLMRFLQGMSY 156


>Z81541-6|CAB04413.2|  326|Caenorhabditis elegans Hypothetical
           protein F48F5.4 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = +2

Query: 398 TALTVIILITFDIPILGPKCDLNAFFARRLIVSSNYFKDCTFIIQFLRKGLN 553
           TAL  +I  TF  PI+G      A    +   SSN  K    +++FL KGLN
Sbjct: 190 TAL-FLIAATFYYPIVGSYWRYQAMKILKTHSSSNTSKGTLVLLRFLIKGLN 240


>AL031633-16|CAA21028.1|  374|Caenorhabditis elegans Hypothetical
           protein Y39A1A.16 protein.
          Length = 374

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/65 (24%), Positives = 34/65 (52%)
 Frame = -3

Query: 474 KNAFKSHFGPNIGMSNVIKIITVSAVKKAFVR*NKNIKTSIIGIRRHARKIMTT*YARYT 295
           KN+FK    P + ++NVI  + + +V K   + +K ++ +I   RR   K++   +  Y 
Sbjct: 17  KNSFKILNLPLVALTNVINQLDIQSVSK-LSKTSKKMRINIKNARRKVHKLIIDNHFEYH 75

Query: 294 LKQLY 280
           + + +
Sbjct: 76  IDKFH 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,383,850
Number of Sequences: 27780
Number of extensions: 299769
Number of successful extensions: 717
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)