Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_H17
(895 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 27 0.17
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 27 0.17
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 27 0.17
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 27 0.23
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.8
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 23 3.8
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 23 3.8
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 6.6
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 8.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 8.7
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 27.5 bits (58), Expect = 0.17
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 426 GKHIRSTVSFFYRLMYCFSVLFSVCAFWFFS 334
GKH ++ Y ++ S++ + C W FS
Sbjct: 53 GKHFHIGLAIIYSMLLIMSLVGNCCVIWIFS 83
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 726 KRFLKNTQQKRIQRTLLKR*ITTVQVSIKY*GLQRL 833
K+ + Q ++IQ+ LKR +T Q SI+ G+QR+
Sbjct: 1050 KQSPSSNQSQQIQQQQLKRVVTNQQQSIQTSGMQRI 1085
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 27.5 bits (58), Expect = 0.17
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 426 GKHIRSTVSFFYRLMYCFSVLFSVCAFWFFS 334
GKH ++ Y ++ S++ + C W FS
Sbjct: 53 GKHFHIGLAIIYSMLLIMSLVGNCCVIWIFS 83
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 27.1 bits (57), Expect = 0.23
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +3
Query: 72 LECKIEKDGRVNCSQIIYNDLKAWQTNRLSL-EDQIRQLRTKLEDLKEIKRHLKITK--- 239
+EC ++K V+ +N+ + + ++ L E++I QL T+ + + HLKITK
Sbjct: 63 IECAMKKFSFVD-KDGNFNEHVSREIAKIFLNENEINQLITECSAISDTNVHLKITKIFQ 121
Query: 240 PITEIHTLN 266
IT+ T+N
Sbjct: 122 CITKFKTIN 130
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/58 (20%), Positives = 29/58 (50%)
Frame = +3
Query: 168 DQIRQLRTKLEDLKEIKRHLKITKPITEIHTLNTPEISSHIHNKTAIYEQTSKEHLKK 341
++I+ + TK+ +KE L + +E + S+ + N+T ++ TS + ++
Sbjct: 166 EEIKNVLTKINKIKEHDTVLVVNIEKSENESKKYATSSNSLRNRTHGFQHTSSRYSRE 223
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 688 VVTISVVGTIPSDTVPTXSKLLGCWYFP 605
V+ IS + + D +PT + WY P
Sbjct: 572 VLVISEIQMVIVDVIPTDKNPVQLWYVP 599
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 23.0 bits (47), Expect = 3.8
Identities = 13/66 (19%), Positives = 27/66 (40%)
Frame = +3
Query: 207 KEIKRHLKITKPITEIHTLNTPEISSHIHNKTAIYEQTSKEHLKKTRMHKLKTKQKNNTL 386
+E+K ++ +PI T + +I ++N E + + + M K +N
Sbjct: 20 EELKTGIQTLQPICVGETGTSQKIIDEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNF 79
Query: 387 IDKKMR 404
+K R
Sbjct: 80 NEKNTR 85
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 23.0 bits (47), Expect = 3.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 22 TIGNSLRFTCLTQMNRHLNVK*KKMEGLTVRKLS 123
T GN+LR T Q+NR LN K G + L+
Sbjct: 189 TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLT 222
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.2 bits (45), Expect = 6.6
Identities = 6/23 (26%), Positives = 16/23 (69%)
Frame = -1
Query: 274 SGVFKVCISVIGLVIFKCRLISF 206
SG+++VC+++ + ++C I +
Sbjct: 101 SGLWRVCVAISSRMEYECSRIDY 123
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.8 bits (44), Expect = 8.7
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = -3
Query: 149 RLPSFQIIIDNLR 111
RLP+F+++ DNL+
Sbjct: 1 RLPNFRVVGDNLK 13
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 8.7
Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Frame = +3
Query: 483 KLDESTHTYMNIGEGVPLKENLTSIYDTELPKPQVTTIIIDGKYQQPNNLDXVGTVSLGI 662
K + H Y+ GE P N + + + TT I Q L T +
Sbjct: 722 KRTDIIHNYIMRGEASPRSPNASP---SPAEQCASTTTITARSPQGSQGLLQCATSNYST 778
Query: 663 V--PTTEIVTTTASSKISIQRATKRFLKNTQQK 755
P T ++TTT ++ Q+ ++ + QQ+
Sbjct: 779 TRWPATSVITTTTGARQQQQQQQQQQQQQQQQQ 811
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,474
Number of Sequences: 438
Number of extensions: 5518
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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