Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H12
         (881 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.       123   6e-30
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   2.3  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   7.1  

>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score =  123 bits (297), Expect = 6e-30
 Identities = 62/71 (87%), Positives = 62/71 (87%)
 Frame = +2

Query: 149 KFSEHNIQGITKPAIRRLARRGGVKRISGLIYXETRXVLKVFLENVIRDAVTYTEHAKRK 328
           K    NIQG TKPAIRRLARRGGVKRISGLIY E R VLKVFLENVIRDAV YTEHAKRK
Sbjct: 21  KVLRDNIQGTTKPAIRRLARRGGVKRISGLIYEERRGVLKVFLENVIRDAVAYTEHAKRK 80

Query: 329 TVTAMDVVYAL 361
           TVTAMDVVYAL
Sbjct: 81  TVTAMDVVYAL 91


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
 Frame = +3

Query: 144 PESSQSIIFKE*RSLPFEDWR---DAAASN 224
           PE+S+++I +E R++  E W+   DA ASN
Sbjct: 861 PEASRAVIRREERAVTLEVWQREWDANASN 890


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 153 NFPVPFRASLPSSLSRLYRDPSV-VASAFQTSNRNGRKILRIPYS 22
           N+P+ FR+S+   L +  R   + V   F+ +     +I+ + YS
Sbjct: 339 NYPIAFRSSIRMMLRQSQRHAHITVGKFFRVNLEEFSRIVNLSYS 383


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,893
Number of Sequences: 2352
Number of extensions: 6742
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)