Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H11
         (933 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    29   0.27 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    27   0.61 
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    27   1.1  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    27   1.1  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   1.1  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.4  
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    26   1.9  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   4.3  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   4.3  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    24   5.7  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   5.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   7.6  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 0.27
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = +3

Query: 213 PCLNTQNYKPSYCWPTLMIP-DSTMRRIY*N--IPEPYFK*LIDATDGFRLPTTGPRRSA 383
           P L+ + Y+P+   P  + P +   R++Y     PE Y   L  A       T+G   +A
Sbjct: 101 PELSPKLYQPTDVSPPKLSPKEDYYRKLYRGEKTPERYAPYL--AVRPVESLTSGSNVAA 158

Query: 384 ALQSTLSICPPSRPSSAPYPTGS 452
           A     +  PP+ PS++P PT S
Sbjct: 159 AAAGASASTPPTIPSASPSPTRS 181


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 27.5 bits (58), Expect = 0.61
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 78  GNDINEFVNFIEWEVMEAP 134
           G D++EF   +EW+++E P
Sbjct: 193 GVDLSEFYTSVEWDILEVP 211


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +3

Query: 78  GNDINEFVNFIEWEVMEAPNTK 143
           G D++EF   +EW+++E P ++
Sbjct: 199 GIDLSEFYLSVEWDILEVPASR 220


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 78  GNDINEFVNFIEWEVMEAP 134
           G D++EF   +EW+++E P
Sbjct: 197 GVDLSEFYMSVEWDILEVP 215


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 78  GNDINEFVNFIEWEVMEAP 134
           G D++EF   +EW+++E P
Sbjct: 197 GVDLSEFYMSVEWDILEVP 215


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 16/60 (26%), Positives = 23/60 (38%)
 Frame = +3

Query: 447 GSPLTVVE*RVSSYHRSLLVSPPEFSQTHSPRSLVLENSHRHCTGYSG*EAEGGSRRRAN 626
           G P ++V       H +  ++      T S  SL  ++SH    GY      GGS    N
Sbjct: 334 GVPGSIVSSSAHQQHTTAGLNSSHIYTTPSSNSLSTQHSHSPVNGYGNNHPTGGSNLPGN 393


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +2

Query: 299 EHSRAILQVADRCDGWLSSSYNGAKKIGGIAIYPFYMPAVE 421
           ++  A+ Q  D CD WL       ++  G A  P     VE
Sbjct: 99  DYRHAVRQAIDECDAWLQGKKKERRRPDGKAHCPLIGMEVE 139


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 78  GNDINEFVNFIEWEVMEAPNTKXRV 152
           G DI+ F+   EWE++  P  +  +
Sbjct: 168 GGDISSFITNGEWELLGVPGKRNEI 192


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 485 LSSVTAGVSTGVLSNTFPAXPSSRKQP 565
           LSSV  G   G+++N   A PSS++QP
Sbjct: 262 LSSVIGG-PPGMVNNGLRAPPSSQQQP 287


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 NNNWVCNSAYLGKESLRGAYAA 187
           N NW+CN+ +  +E LRG  +A
Sbjct: 147 NVNWICNAVHKHRE-LRGLTSA 167


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 218 ARSLLGARTPLCPVPASVAG 159
           A SLLG + PL P P  + G
Sbjct: 41  AASLLGKQRPLAPAPTVLGG 60


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 357 PTTGPRRSAALQSTLSICPPSRPSSAPYPTGSP 455
           P   P  +  + S++   PP+RPS  P    +P
Sbjct: 84  PAPQPSLAPVVPSSVVTAPPARPSQPPTTRFAP 116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,641
Number of Sequences: 2352
Number of extensions: 18032
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)