Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H08
         (906 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    52   4e-07
AF003384-6|AAB54238.2|  451|Caenorhabditis elegans Coenzyme q (u...    38   0.010
Z50756-1|CAA90637.2|  737|Caenorhabditis elegans Hypothetical pr...    33   0.21 
AF036705-5|AAB95172.1|  544|Caenorhabditis elegans Hypothetical ...    31   1.5  
Z81449-1|CAB03763.1|  473|Caenorhabditis elegans Hypothetical pr...    30   2.0  
D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA...    30   2.6  
AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical ...    30   2.6  
AL008866-1|CAA15509.3|  724|Caenorhabditis elegans Hypothetical ...    29   3.5  
U00048-15|AAB53835.2|  597|Caenorhabditis elegans Lethal protein...    29   6.0  
U58749-1|AAK18877.1|  238|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
 Frame = +2

Query: 323 IIVGAGTAGSALAARLSEVANFSVLLLEAGG-DPPIEAII---PAFRETLKASSVDWNF- 487
           IIVGAG+AG  LA RL+E  +  VLL+EAG  D   +  I    A    L + + +W++ 
Sbjct: 41  IIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWHYH 100

Query: 488 TSVENNITSQALKRGIEQQPRGKMLGGSGSLNHMVYARG 604
           T+ + N+ ++     +   PRG++ GGS +LN M Y RG
Sbjct: 101 TTAQKNLGNR-----VFYWPRGRVWGGSSTLNAMCYVRG 134



 Score = 34.3 bits (75), Expect = 0.12
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 615 NYHEWASIAGETWNWTNVLKYFMKTEHMTDTNIVNNP 725
           +Y+ W       WN+ N L YF K E  +D    N+P
Sbjct: 138 DYNRWEKEGASGWNYANCLPYFKKAETYSDATGPNDP 174


>AF003384-6|AAB54238.2|  451|Caenorhabditis elegans Coenzyme q
           (ubiquinone) biosynthesisprotein 6 protein.
          Length = 451

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +2

Query: 308 SRYDFIIVGAGTAGSALAARLSEVANF---SVLLLEAGGDPPIEAIIP 442
           S YD +IVG G  G+A+A  L    +F   SVLLL+AG  P + +  P
Sbjct: 16  SYYDTVIVGGGMVGNAMACSLGANKSFQSKSVLLLDAGRSPSLASFKP 63


>Z50756-1|CAA90637.2|  737|Caenorhabditis elegans Hypothetical
           protein T08D10.2 protein.
          Length = 737

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 266 VGETWPKDSVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAGG 415
           +G  +PK  ++ N  +   +++GAG AG A A +L     F V ++EA G
Sbjct: 159 IGFFFPKTELVNNMEKKFVVVIGAGAAGIAAATQLL-TFGFDVAVVEASG 207


>AF036705-5|AAB95172.1|  544|Caenorhabditis elegans Hypothetical
           protein F37C4.6 protein.
          Length = 544

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +2

Query: 314 YDFIIVGAGTAGSALAARLSEVANFSVLLLE----AGGDPPIEAIIPAFR 451
           YD II+G G  G   AA L++ A   V +LE     GG    E I+P FR
Sbjct: 15  YDAIIIGGGHNGLTAAAYLTK-AGKKVCVLERRHVVGGAAVTEEIVPGFR 63


>Z81449-1|CAB03763.1|  473|Caenorhabditis elegans Hypothetical
           protein C46F11.2a protein.
          Length = 473

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 290 SVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAG 412
           S++     +D++++G G+ G A A R  E    SV L+E+G
Sbjct: 13  SIMSGVKEFDYLVIGGGSGGIASARRAREF-GVSVGLIESG 52


>D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA
           thiolase protein.
          Length = 412

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 24/85 (28%), Positives = 41/85 (48%)
 Frame = +2

Query: 335 AGTAGSALAARLSEVANFSVLLLEAGGDPPIEAIIPAFRETLKASSVDWNFTSVENNITS 514
           +G++G  L  ++ E  N  V+L  AG     E + P   E L A+ +D    SV+ +I+ 
Sbjct: 89  SGSSGLFLGKQIIESGNSDVVLC-AG----FERMAPGSLENL-AAPIDDRALSVDKHISV 142

Query: 515 QALKRGIEQQPRGKMLGGSGSLNHM 589
            +   G+E  P    + G+ +  HM
Sbjct: 143 MSETYGLEPAPMTAQMFGNAAKEHM 167


>AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical
           protein Y57A10C.6 protein.
          Length = 412

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 24/85 (28%), Positives = 41/85 (48%)
 Frame = +2

Query: 335 AGTAGSALAARLSEVANFSVLLLEAGGDPPIEAIIPAFRETLKASSVDWNFTSVENNITS 514
           +G++G  L  ++ E  N  V+L  AG     E + P   E L A+ +D    SV+ +I+ 
Sbjct: 89  SGSSGLFLGKQIIESGNSDVVLC-AG----FERMAPGSLENL-AAPIDDRALSVDKHISV 142

Query: 515 QALKRGIEQQPRGKMLGGSGSLNHM 589
            +   G+E  P    + G+ +  HM
Sbjct: 143 MSETYGLEPAPMTAQMFGNAAKEHM 167


>AL008866-1|CAA15509.3|  724|Caenorhabditis elegans Hypothetical
           protein B0019.1 protein.
          Length = 724

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 314 YDFIIVGAGTAGSALAARLSE-VANFSVLLLEAGG 415
           YD I+VGAG  G   A  + +     SVL+LEA G
Sbjct: 46  YDVIVVGAGLTGLTAARNIQQNRPGLSVLVLEARG 80


>U00048-15|AAB53835.2|  597|Caenorhabditis elegans Lethal protein
           721 protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 278 WPKDSVLQNGSRYDFIIVGAGTAGSALAARLSEVA 382
           W    + +    YD +IVG G +G + A RL ++A
Sbjct: 39  WKDVDLARESDVYDVVIVGGGPSGLSAAIRLRQLA 73


>U58749-1|AAK18877.1|  238|Caenorhabditis elegans Hypothetical
           protein B0496.6 protein.
          Length = 238

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 297 CKMALDTTSSSWVPVPLALRSPPDSPRLP-TSAYSYWRRAEI 419
           C +A DTT  ++ P PL + S P S  +  T    Y++  E+
Sbjct: 168 CDVATDTTQITFTPSPLPIPSEPKSSDIKVTVIEEYYKEEEL 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,144,835
Number of Sequences: 27780
Number of extensions: 461216
Number of successful extensions: 1104
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)