Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H08
         (906 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    80   3e-17
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   2.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   2.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.9  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    23   5.1  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   6.7  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   6.7  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   6.7  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   6.7  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   6.7  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 79.8 bits (188), Expect = 3e-17
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
 Frame = +2

Query: 236 VQFFAATQCLVGETWPK--DSVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEA 409
           + FF AT  ++GE   +   S + + S YDFI+VG G A + +A RLSEV+N+ VLLLEA
Sbjct: 42  LNFFVATSPVIGEPCQRVHSSRIPDLS-YDFIVVGGGAARAVVAGRLSEVSNWKVLLLEA 100

Query: 410 GGDPPIEAIIPAFRETLKASSVDWNFTSVENNITSQALKRGIEQQPRGKMLGGSGSLNHM 589
           G D P  A IP+  +      +DW + +  N   +     G    PRGK LGG+   + M
Sbjct: 101 GPDEPAGAEIPSNLQLYLGGDLDWKYYTT-NESHACLSTGGSCYWPRGKNLGGTTLHHGM 159

Query: 590 VYARGFPSELPR 625
            Y RG   +  R
Sbjct: 160 AYHRGHRKDYER 171



 Score = 31.9 bits (69), Expect = 0.008
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 612 QNYHEWASIAGETWNWTNVLKYFMKTEHMTDTNIV 716
           ++Y  W       W+W  V+ Y++K+E+ T+ + V
Sbjct: 167 KDYERWVQQGAFGWSWDEVMPYYLKSENNTELSRV 201


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 288 ILCCKMALDTTSSSWVPVPLALR 356
           I+ C MAL    ++W P+P  L+
Sbjct: 5   IVFCLMALSIVDAAWKPLPENLK 27


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 288 ILCCKMALDTTSSSWVPVPLALR 356
           I+ C MAL    ++W P+P  L+
Sbjct: 5   IVFCLMALSIVDAAWKPLPENLK 27


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 521 LKRGIEQQPRGKMLGGSGSLNH 586
           L RG++  PRG +L     LNH
Sbjct: 459 LSRGLDFTPRGAVLARFTHLNH 480


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 75  NHNYSG*RKIKLKVICYNYSKV 140
           N+NYS       K +CYN + +
Sbjct: 88  NYNYSNYNNNNYKQLCYNINHI 109


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 75  NHNYSG*RKIKLKVICYNYSKV 140
           N+NYS       K +CYN + +
Sbjct: 88  NYNYSNYNNNNYKQLCYNINYI 109


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 75  NHNYSG*RKIKLKVICYNYSKV 140
           N+NYS       K +CYN + +
Sbjct: 88  NYNYSNYNNNNYKQLCYNINYI 109


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 75  NHNYSG*RKIKLKVICYNYSKV 140
           N+NYS       K +CYN + +
Sbjct: 88  NYNYSNYNNNNYKQLCYNINYI 109


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 75  NHNYSG*RKIKLKVICYNYSKV 140
           N+NYS       K +CYN + +
Sbjct: 88  NYNYSNYNNNNYKQLCYNINYI 109


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 75  NHNYSG*RKIKLKVICYNYSKV 140
           N+NYS       K +CYN + +
Sbjct: 88  NYNYSNYNNNNYKQLCYNINYI 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,065
Number of Sequences: 438
Number of extensions: 6307
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)