Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H06
         (939 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr...    87   2e-17
U53339-6|AAA96202.1|  348|Caenorhabditis elegans Serpentine rece...    32   0.68 
L25598-6|AAA27939.2|  886|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical...    29   4.8  
Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical p...    28   8.4  
AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical ...    28   8.4  

>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
           protein C08H9.2 protein.
          Length = 1220

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
 Frame = +2

Query: 254 HVEEMNNVGYENN-----VSFAYDDLFPALPHSQPLVQRNIQQAT--NKLRVGSSLHTQV 412
           H+EE NNV  +       +SF+Y   FP LP + P      +Q    ++  +  S     
Sbjct: 5   HIEETNNVEIDPATGGAVMSFSYASDFPTLPDAAPASAPTAKQTHVWSRPTLSKSEVNIT 64

Query: 413 FHVPYEERKLDNANTFGE-GESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLE 589
           F +  +ER  +   +FG   E  +   +I   T   IE+S SKDG LT ++ G+++   E
Sbjct: 65  FRLASDERS-NKVKSFGSTSEESKKAQAIATATKTRIELSESKDGELTVVVKGERAKAEE 123

Query: 590 ARRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVT 715
           AR +I+   Q QAS++I IPK+H+  ++GK+G  L+ LE  T
Sbjct: 124 ARARIIRDLQTQASREIDIPKDHHGRLIGKEGALLRNLEAET 165



 Score = 33.5 bits (73), Expect = 0.22
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = +2

Query: 452 NTFGEGESLRTCHSITKDTGAHIEISTSKDGSLTFLITGKQSAVLEAR---RQILTHFQQ 622
           +  G G SL +   I    G  I I   +  S   ++ GK+  V +A    R I+T  + 
Sbjct: 432 HVIGRGGSLIS--KIKDQHGVQITIPNEETNSDEIVVEGKKEGVKKAVTEIRAIVTKIEN 489

Query: 623 QASKQISIPKEHYRWILGKQG 685
           + S+ I IP+  ++ I+G +G
Sbjct: 490 EKSRDIIIPQRLHKLIIGSKG 510


>U53339-6|AAA96202.1|  348|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 12 protein.
          Length = 348

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = -3

Query: 472 FSLTKSISIVKFSFFIWHMENLSVQ*RANSKFVCSLLYITLHKGLGMR 329
           F L  + S ++F+ F+W+M  L +     + F+C+L+ + +HK L  R
Sbjct: 175 FILVPATSALQFNSFLWYMLYLKI-----TNFICNLILLFIHKILHQR 217


>L25598-6|AAA27939.2|  886|Caenorhabditis elegans Hypothetical
           protein C06G4.1 protein.
          Length = 886

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 647 PKEHYRWILGKQGQKLKELEKVTAT 721
           P   YR I+G+ G+ LK +EKVT T
Sbjct: 706 PISFYRKIIGRCGENLKTIEKVTRT 730


>AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical
           protein Y48C3A.14 protein.
          Length = 855

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 547 TAIFAGRYFDVRSCILSYG--MASS*GFSLTKSISIVKF 437
           T  F G+Y D+ S ++SYG     + GF +T+   IV+F
Sbjct: 198 TKFFQGKYGDLDSNVISYGPCQTPTLGFCVTRHDQIVQF 236


>Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 224 VIPVHPDVPMHVEEMNNVGYENNVSFAYDDLFPALPHSQPLVQRN-IQQATNKLRVGSSL 400
           ++  HP     +   N V +EN+++   D+  PAL     +V R  +Q   NK  + ++L
Sbjct: 12  IVDGHPRFKCPLSTCNAVVHENDINAVLDEKEPALERYMSIVHRRYLQYKQNKHSIMAAL 71


>AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 224 VIPVHPDVPMHVEEMNNVGYENNVSFAYDDLFPALPHSQPLVQRN-IQQATNKLRVGSSL 400
           ++  HP     +   N V +EN+++   D+  PAL     +V R  +Q   NK  + ++L
Sbjct: 12  IVDGHPRFKCPLSTCNAVVHENDINAVLDEKEPALERYMSIVHRRYLQYKQNKHSIMAAL 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,018,639
Number of Sequences: 27780
Number of extensions: 367009
Number of successful extensions: 1074
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)