Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H05
         (909 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.62 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   4.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   4.4  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 713 KLCIILWYFFIINWHIILYLSSYE*YKTFKQVRIALFHIF 832
           K C IL YF I  + + +  SS   +  F     A  HIF
Sbjct: 36  KFCRILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIF 75


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 248 RIVINFSIYCALFFIFALFDSSDAIS 171
           R++  FS  C LFFI+  +  +  ++
Sbjct: 8   RVLFFFSFCCILFFIYLYWQQTSNLT 33


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -2

Query: 572 LVERPHCCRCGWNDIVHEEEKCV 504
           LV  P   RC      HE E C+
Sbjct: 69  LVGTPETLRCQREGFFHEREPCI 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,194
Number of Sequences: 336
Number of extensions: 4002
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)