Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_H03
(862 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 25 0.68
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 0.68
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 1.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 3.6
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 4.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 4.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 4.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 8.4
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 8.4
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.68
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -2
Query: 738 FYFFFHH----LMVHHCLAFFVIFHSLRIYRYQNILNRFYLHK 622
FYF +H M+ + L F I + ++ +LNR+YL +
Sbjct: 231 FYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLER 273
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.68
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -2
Query: 738 FYFFFHH----LMVHHCLAFFVIFHSLRIYRYQNILNRFYLHK 622
FYF +H M+ + L F I + ++ +LNR+YL +
Sbjct: 231 FYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLER 273
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 125 FNLTFVRS--ITHVCSLKPYKDTKWLMPNGNPTGIYVYNCIANQRVPVIL 268
+N+TF ++ P K W+ N G VY+ + + +P+++
Sbjct: 213 YNMTFAQNGPFNTTTIFVPVKPCPWICELTNDAGYVVYSALGSFYIPMLV 262
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 594 IQRLIDNNMAYVSKNGSVYFDTDKFS 671
+ + I + Y +KNGSV DT + S
Sbjct: 187 VPQAIQFGVVYENKNGSVILDTARCS 212
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 636 NGSVYFDTDKFSNYGKLQKMQDSGEPSDDEKRN 734
+G V+F D S YG ++ G P + K++
Sbjct: 6 SGKVHFGVDDVSLYGTPKEEPGPGLPGQEVKQS 38
Score = 22.2 bits (45), Expect = 6.3
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -1
Query: 601 LCMNFSILLMCSDTLVMMSGFATFNDAISSQNSCSYCLA 485
LCM +LL+ ++ +++ + FND +S++ CL+
Sbjct: 93 LCM---LLLLVANLIILPVAISFFNDDLSTRWIAFNCLS 128
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 636 NGSVYFDTDKFSNYGKLQKMQDSGEPSDDEKRN 734
+G V+F D S YG ++ G P + K++
Sbjct: 6 SGKVHFGVDDVSLYGTPKEEPGPGLPGQEVKQS 38
Score = 22.2 bits (45), Expect = 6.3
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -1
Query: 601 LCMNFSILLMCSDTLVMMSGFATFNDAISSQNSCSYCLA 485
LCM +LL+ ++ +++ + FND +S++ CL+
Sbjct: 93 LCM---LLLLVANLIILPVAISFFNDDLSTRWIAFNCLS 128
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 636 NGSVYFDTDKFSNYGKLQKMQDSGEPSDDEKRN 734
+G V+F D S YG ++ G P + K++
Sbjct: 6 SGKVHFGVDDVSLYGTPKEEPGPGLPGQEVKQS 38
Score = 22.2 bits (45), Expect = 6.3
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -1
Query: 601 LCMNFSILLMCSDTLVMMSGFATFNDAISSQNSCSYCLA 485
LCM +LL+ ++ +++ + FND +S++ CL+
Sbjct: 93 LCM---LLLLVANLIILPVAISFFNDDLSTRWIAFNCLS 128
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 8.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 567 EHINSIEKFIQRLIDNNMAYVSKNGSVYFDTDKFSNYGK 683
E S E I + NN Y + N ++ + ++NY K
Sbjct: 305 ERERSKEPKIISSLSNNYKYSNYNNYNNYNNNNYNNYNK 343
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 143 RSITHVCSLKPYKDTKWLM 199
RS T V L+P+ +T W++
Sbjct: 553 RSSTLVSFLQPFSNTLWIL 571
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,548
Number of Sequences: 438
Number of extensions: 5280
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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