Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_H02
         (958 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NEG7 Cluster: ENSANGP00000030087; n=2; cellular organ...    38   0.29 
UniRef50_Q55BQ0 Cluster: Putative uncharacterized protein; n=1; ...    37   0.66 
UniRef50_Q5BXC0 Cluster: Putative uncharacterized protein; n=1; ...    35   3.5  
UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome s...    33   8.2  
UniRef50_P15605 Cluster: Uncharacterized mitochondrial protein O...    33   8.2  

>UniRef50_A0NEG7 Cluster: ENSANGP00000030087; n=2; cellular
           organisms|Rep: ENSANGP00000030087 - Anopheles gambiae
           str. PEST
          Length = 107

 Score = 38.3 bits (85), Expect = 0.29
 Identities = 22/66 (33%), Positives = 25/66 (37%)
 Frame = -3

Query: 350 IFPXKXFFFXXFXXXFPKXXKXFXFFXFPFXPXFXXIXCPLFFXFFFXFXXXFFIPXXLF 171
           +F     FF      F      F FF F F   F  +    FF FFF F   FF     F
Sbjct: 10  VFSFSFLFFFVLSSFFFFFFFFFFFFFFFFFFFFFFVLFSFFFFFFFIFNLSFFFFILSF 69

Query: 170 XXFFYL 153
             FF+L
Sbjct: 70  FFFFFL 75



 Score = 36.3 bits (80), Expect = 1.2
 Identities = 21/60 (35%), Positives = 23/60 (38%)
 Frame = -3

Query: 332 FFFXXFXXXFPKXXKXFXFFXFPFXPXFXXIXCPLFFXFFFXFXXXFFIPXXLFXXFFYL 153
           FFF  F   F      F FF F F   F       FF FF  F   FF    +F   F+L
Sbjct: 35  FFFFFFFFFFFVLFSFFFFFFFIFNLSFFFFILSFFFFFFLLFVFFFFF-FIIFSLLFFL 93


>UniRef50_Q55BQ0 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 165

 Score = 37.1 bits (82), Expect = 0.66
 Identities = 23/60 (38%), Positives = 24/60 (40%)
 Frame = -3

Query: 332 FFFXXFXXXFPKXXKXFXFFXFPFXPXFXXIXCPLFFXFFFXFXXXFFIPXXLFXXFFYL 153
           FFF  F   F        FF F F   F  I    FF FFF F   FF     F  FFY+
Sbjct: 18  FFFIIFFFIFFPIFFFIFFFFFIFFFFFIFIFIFFFFFFFFFFFFFFFF---FFFFFFYM 74


>UniRef50_Q5BXC0 Cluster: Putative uncharacterized protein; n=1;
           Schistosoma japonicum|Rep: Putative uncharacterized
           protein - Schistosoma japonicum (Blood fluke)
          Length = 118

 Score = 34.7 bits (76), Expect = 3.5
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = -3

Query: 284 FXFFXFPFXPXFXXIXCPLFFXFFFXFXXXFFIPXXLFXXFFYLSXD 144
           F FF F F   F       FF FFF F   FF     F  FF+L  +
Sbjct: 7   FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLGGE 53


>UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 13 SCAF15000, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 307

 Score = 33.5 bits (73), Expect = 8.2
 Identities = 23/66 (34%), Positives = 24/66 (36%)
 Frame = -2

Query: 636 FSXXSPXFXETXXXPLSXIXXPXPPPXXXXXXXLXXXXXXXPKXKXPFPPXXPXXFXPKX 457
           FS   P F  +   PLS    P PPP       L       P    P PP  P  F P  
Sbjct: 153 FSFFPPPFPPSP--PLSPPYFPPPPPLPPPPFPLF------PLFPPPPPPPPPPPFSPPP 204

Query: 456 XPXPPP 439
            P PPP
Sbjct: 205 PPSPPP 210


>UniRef50_P15605 Cluster: Uncharacterized mitochondrial protein
           ORF4; n=1; Paramecium tetraurelia|Rep: Uncharacterized
           mitochondrial protein ORF4 - Paramecium tetraurelia
          Length = 156

 Score = 33.5 bits (73), Expect = 8.2
 Identities = 26/89 (29%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
 Frame = -3

Query: 404 FKFFXPXXXGSXKTXXPPIFPXKXFFFXXFXXXFPKXXKXFX--FFXFPFXPXFXXIXCP 231
           F FF        K   PP F    FF        P     F   FF F +   F  +   
Sbjct: 43  FTFFIFFLAAVFKLGLPPFF----FFKIEVYKGLPLFVTFFYSVFFFFNYLSGFFFLFFV 98

Query: 230 LFFXFF--FXFXXXFFIPXXLFXXFFYLS 150
            F  FF  F +   FF+P  +   FFYL+
Sbjct: 99  FFTSFFVYFSYLLFFFVPVFVLFFFFYLT 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,706,702
Number of Sequences: 1657284
Number of extensions: 2278180
Number of successful extensions: 17211
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12880
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88590537959
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)