Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_G23
(976 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0241 - 8204430-8205398 40 0.002
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.4
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664... 30 2.4
01_05_0636 + 23852985-23853142,23853253-23853445,23853910-238540... 30 2.4
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 4.2
01_06_1332 - 36379736-36379909,36380395-36380459,36380534-363806... 29 4.2
03_05_0267 - 22538631-22539452 29 5.6
03_01_0515 - 3864796-3865425 29 5.6
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 5.6
01_06_0347 + 28592552-28593502 29 5.6
04_04_1667 + 35211776-35212132,35212640-35212727,35213573-352137... 29 7.4
04_03_0965 - 21296608-21297165,21297332-21297682,21297781-212979... 29 7.4
03_06_0072 - 31469595-31469684,31469762-31469848,31469968-314700... 29 7.4
03_04_0228 - 18989688-18989807,18990300-18990345,18990452-189905... 29 7.4
01_05_0485 - 22628999-22629325,22630340-22630450,22630888-226310... 29 7.4
01_01_1213 - 9769268-9769975 29 7.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 9.8
06_01_1180 + 10141850-10141959,10142096-10142621 28 9.8
04_04_1125 + 31085106-31085714 28 9.8
>02_02_0241 - 8204430-8205398
Length = 322
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 406 SDGLFDVTWSGSSDNTAACGAGDGTVIVXRVG---CAAPLRVLRAHTSEV 546
SD LFD WS S ++ A +GDG+V + V P+R+LR H EV
Sbjct: 65 SDALFDCAWSESHESLCAAASGDGSVRLFDVALPPAQNPVRLLREHAREV 114
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 759 HPXXAXPCXPPXGAPXTAQSXPSXXTPXPXPRXXHXPTPXXXAPXPGLXXGAXG 920
HP A P PP +A S P P P P P P P GA G
Sbjct: 327 HP--AAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAG 378
>09_06_0328 +
22365308-22365415,22365743-22366018,22366166-22366417,
22366542-22366939,22367028-22368021,22368199-22368409,
22368515-22368749,22368874-22368996,22369190-22369310,
22369416-22369625
Length = 975
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 364 PDGGTWIEVQKLEWSDG-LFDVTWSGSSDNTAACGAGDGTVIVXRVGCAAPLRVLRAHTS 540
PD W V L + D+ WS D+T A G+ D TV + + VLR H+S
Sbjct: 110 PDVENWKVVMTLRGHTADVVDLNWS-PDDSTLASGSLDNTVHIWSMANGICTAVLRGHSS 168
Query: 541 EV 546
V
Sbjct: 169 LV 170
>01_05_0636 +
23852985-23853142,23853253-23853445,23853910-23854033,
23854285-23854637,23855525-23856530,23856892-23857085,
23857238-23857324
Length = 704
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 484 SLCHHRPHRQPYCLSCLTKSHRKVHRSTLISE 389
SLC P PY + C TKSH + S+ +++
Sbjct: 282 SLCGWEPRLLPYAVDCGTKSHSDANSSSTLTQ 313
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 786 PPXGAPXTAQSXPSXXTPXPXPRXXHXPTPXXXAPXP 896
PP P A++ TP P P P P AP P
Sbjct: 128 PPPPPPPPARTPMPTPTPTPTPTPTRPPVPVWAAPLP 164
>01_06_1332 -
36379736-36379909,36380395-36380459,36380534-36380612,
36380794-36380868,36381106-36381609,36382046-36382246,
36383033-36383566
Length = 543
Score = 29.5 bits (63), Expect = 4.2
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = -3
Query: 470 PAPQAAVLSELPDQVTSKSPSL----HSNF*TSIQVPPSGASSKKNPGSSAXXSVILAGG 303
P AA S PDQ+ + + S + N S Q+PPS S + SS AGG
Sbjct: 4 PPSAAATASPQPDQLAAAAVSTPQNPNPNPLLSPQIPPSPTVSDLSAISSPQLDPSAAGG 63
Query: 302 GCQCIRPSPXXPDAIS 255
G P P A S
Sbjct: 64 GAMDYPPRPPQMQAPS 79
>03_05_0267 - 22538631-22539452
Length = 273
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = -2
Query: 768 GXGAXPHEX*XGPVTRRPGGESGRPXWGSXTXPCXPGCXDP*XAETRXXXRGPKVGRS 595
G G+ E GP RR RP W + P P A T P G S
Sbjct: 154 GDGSGGGELGGGPTVRRRASPPARPRWWPCSPSSPPASPSPSPARTSPPSSSPSRGCS 211
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 735 PXXTHGAXHPXXAXPCXPPXGAPXTAQSXPSXXTPXPXPRXXHXPTPXXXAPXP 896
P T P PP P S P P P P P P +P P
Sbjct: 55 PSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +3
Query: 786 PPXGAPXTAQSXPSXXTPXPXPR--XXHXPTPXXXAPXP 896
PP + TA P+ TP P P H P P P P
Sbjct: 56 PPSSSASTAAPLPAPPTPSPVPEHLHHHPPPPPPVPPCP 94
>01_06_0347 + 28592552-28593502
Length = 316
Score = 29.1 bits (62), Expect = 5.6
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = -3
Query: 590 PTGXQQMAXGPIXGHTSLVCARRTLKGAAQPTLXTITVPSPAPQAAVLSELP--DQVTSK 417
P + P +S + A TL + P + + +PSP + V S P D V +
Sbjct: 31 PPPSPSLVVAPTPPPSSFLVAAPTLLSSPTPVVVPMLLPSPT-RPVVFSMQPHFDLVPAL 89
Query: 416 SPSLHSNF*TSIQVPPSGASSKKNPGSS 333
PS S QVP S SS PGS+
Sbjct: 90 PPS-------SPQVPQSSLSSLSAPGST 110
>04_04_1667 +
35211776-35212132,35212640-35212727,35213573-35213705,
35213806-35214616
Length = 462
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3
Query: 518 LKGAAQPTLXTITVPSPAPQAAVLSELPDQVTSKSPSLHSNF*TSI 381
+ A QP+ + PS A QAA P Q +S S S SN T I
Sbjct: 378 IAAAPQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNHDTVI 423
>04_03_0965 -
21296608-21297165,21297332-21297682,21297781-21297965,
21298076-21298172,21298859-21299071,21299206-21299334,
21299442-21299567,21301280-21301999
Length = 792
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 337 EPGFFLELAPDGGTWIEVQKLEWSDGLFDV 426
EP FL AP GG Q W+ GLF++
Sbjct: 521 EPPAFLGCAPTGGPACLTQFKRWATGLFEI 550
>03_06_0072 -
31469595-31469684,31469762-31469848,31469968-31470036,
31470117-31470185,31470269-31471306
Length = 450
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +3
Query: 789 PXGAPXTAQSXPSXXTPXPXPRXXHXPTPXXXAP 890
P AP + P P PR H P+P AP
Sbjct: 192 PTAAPAATPVSRTKPAPAPSPRPAHVPSPAVAAP 225
>03_04_0228 -
18989688-18989807,18990300-18990345,18990452-18990552,
18990624-18990702,18990788-18990868,18991440-18991502,
18994171-18994246,18994980-18995246,18995994-18996076,
18996792-18996922,18997043-18997174
Length = 392
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 570 HLLXPSWDTTVQLWDPD 620
HLL SWD TV+L+D D
Sbjct: 36 HLLVSSWDKTVRLYDAD 52
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 546 VPVDWPXGHLLXPSWDTTVQLWDP 617
V + G ++ SWD T++ WDP
Sbjct: 109 VEYSYAAGQVITGSWDKTIKCWDP 132
>01_05_0485 -
22628999-22629325,22630340-22630450,22630888-22631034,
22631283-22631337,22631761-22632134,22632926-22633000,
22633419-22633670
Length = 446
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = -1
Query: 559 QSTGTLHWYAPGELSKELHNRPSXQSLCHHRPHRQPYCLSCLTKSHRKVHRSTLISELRS 380
+S GT ++PGE +E H R PYC + ++ K +S I+ +
Sbjct: 319 RSFGTEARFSPGEYGRERKGIQKDMRSRHGRQQETPYCETTCSEFKHKHLKSLKIAGFKV 378
Query: 379 RSRHQE 362
++ E
Sbjct: 379 EEKYME 384
>01_01_1213 - 9769268-9769975
Length = 235
Score = 28.7 bits (61), Expect = 7.4
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 473 SPAPQAAVLSELPDQVTSKSPSLHSNF*TSIQVPPSGASSKKNPGSSAXXSVILAGGGCQ 294
SPA A+ + L S +PS S++ S P+ ++S SSA + ILAGGG +
Sbjct: 29 SPAADDAITAAL---WASMAPSSASSYCGSA-ASPTPSTSTTTTSSSAASAEILAGGGAR 84
Query: 293 -CIRPS 279
RPS
Sbjct: 85 AATRPS 90
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 9.8
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 7/63 (11%)
Frame = +3
Query: 708 PPQVSG*RDPXXTHGAXHPXXAXPCXPPXGAPXTAQ-------SXPSXXTPXPXPRXXHX 866
PPQ GA P A P PP G P Q P P P P+ +
Sbjct: 32 PPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQ 91
Query: 867 PTP 875
P P
Sbjct: 92 PPP 94
>06_01_1180 + 10141850-10141959,10142096-10142621
Length = 211
Score = 28.3 bits (60), Expect = 9.8
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -3
Query: 512 GAAQPTLXTITVPSPAP-QAAVLSELPDQVTSKSPSLHSNF*TSIQVPPSGASSKKNPGS 336
GAA P+ +T P+PAP QA S PD P + + PP ++S+ +
Sbjct: 143 GAAAPSPAPVTSPAPAPAQATNPSPSPDSKPDNQP--------AAEQPPENSASRGGMAA 194
Query: 335 SAXXSVIL 312
+ SV++
Sbjct: 195 WSLLSVVV 202
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 777 PCXPPX--GAPXTAQSXPSXXTPXPXPRXXHXPTPXXXAP 890
PC PP P T + P+ TP P PTP P
Sbjct: 43 PCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTP 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,496,113
Number of Sequences: 37544
Number of extensions: 453939
Number of successful extensions: 1735
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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